Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_H09
(751 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15823| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_1079| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_23912| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_25763| Best HMM Match : MgtE_N (HMM E-Value=1.9) 31 0.76
SB_14700| Best HMM Match : MbeB_N (HMM E-Value=1.8) 29 3.0
SB_25802| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_10164| Best HMM Match : Keratin_B2 (HMM E-Value=3.4) 29 5.3
SB_183| Best HMM Match : IBR (HMM E-Value=0.015) 29 5.3
SB_31681| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_19401| Best HMM Match : Rop (HMM E-Value=3) 28 9.3
SB_36505| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_24229| Best HMM Match : Fukutin-related (HMM E-Value=0.61) 28 9.3
>SB_15823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 637
Score = 48.8 bits (111), Expect = 5e-06
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Frame = +1
Query: 175 ISLEHXILLHPKYFGPQLLEXVKQKLYTDVEGTCTGKYGFVIAVTQIDNIGAGLIQHGQG 354
+ ++ + L PKY +++ V+ ++ + V G CT + G+V++V ++ + +
Sbjct: 249 VVIKRRLFLDPKYLDSEIMNHVRDEIVSTVVGECTRELGWVLSVGRLTEV-VNVCD---- 303
Query: 355 FVMYPVKYKAVVFRPFKGEVLDGIVTQVNKVGMFAQIGPL-KCFISHHSIPDYM-EFCPN 528
++ V ++ RP G L G V V G+ ++ + K I S+ Y+ E C N
Sbjct: 304 -TIFRVSFEVETLRPRVGGELVGEVRMVWAGGVLLEVSDIQKVVIPSTSLDGYVFEACSN 362
Query: 529 VNPPCY-----KSKQEDSVIQEEDVIRLKIVGTRVDASGIFAIGTLIG 657
CY + K+ D+V+ +R++ G VD G+ A +G
Sbjct: 363 ----CYVREGERIKEGDTVLVTVTTVRMERFG--VDVDGVMAYAARVG 404
>SB_1079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 31.9 bits (69), Expect = 0.57
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +2
Query: 101 NHNXTNLIAWXPHRNLSTAEKCSTTFHWST--XFCYIRNISVHNYWXQSN 244
++N + W H N ST ST +WST + N S HN W N
Sbjct: 33 HNNWSTYNNWSTHNNWSTYNNWSTYNNWSTHNNWSTYNNWSTHNNWSTYN 82
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +2
Query: 104 HNXTNLIAWXPHRNLSTAEKCSTTFHWSTXFCYIRNISVHNYWXQSN 244
HN + W H N S ST +WST N S HN W N
Sbjct: 10 HNWSTYENWSSHNNWSIHNNWSTHNNWST----YNNWSTHNNWSTYN 52
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 101 NHNXTNLIAWXPHRNLSTAEKCSTTFHWSTXFCYIRNISVHNYWXQSN 244
++N + W H N ST ST +WST N S HN W N
Sbjct: 63 HNNWSTYNNWSTHNNWSTYNNWSTHNNWST----YNNWSTHNNWNTRN 106
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 101 NHNXTNLIAWXPHRNLSTAEKCSTTFHWSTXFCYIRNISVHNYWXQSN 244
++N + W H N +T ST +WST N S HN W N
Sbjct: 87 HNNWSTYNNWSTHNNWNTRNNWSTHNNWST----YNNWSTHNNWSTYN 130
>SB_23912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 31.5 bits (68), Expect = 0.76
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = -3
Query: 461 CANMPTLFTCVTIPSK--TSPLNGLNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAI 297
C + T +TIP T+P L T L LT +T PC P +L+ +
Sbjct: 492 CLVLTTPCLVLTIPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVL 551
Query: 296 TNPYLPVQVPSTSVYSFCLTXSNSC 222
T P L + P + + CL + C
Sbjct: 552 TTPCLVLTTPCLVLTTPCLVLTTPC 576
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -3
Query: 413 TSPLNGLNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAITNPYLPVQVPSTSVYSFC 243
T+P L T L LT +T PC P +L+ +T P L + P + S C
Sbjct: 559 TTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPGLVLTTPGLVLTSPC 618
Query: 242 LTXSNSC 222
L + C
Sbjct: 619 LVLTTPC 625
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -3
Query: 413 TSPLNGLNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAITNPYLPVQVPSTSVYSFC 243
T+P L T L LT +T PC P +L+ +T P L + P + + C
Sbjct: 517 TTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPC 576
Query: 242 LTXSNSC 222
L + C
Sbjct: 577 LVLTTPC 583
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -3
Query: 413 TSPLNGLNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAITNPYLPVQVPSTSVYSFC 243
T+P L T L LT +T PC P +L+ +T P L + P + + C
Sbjct: 524 TTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPC 583
Query: 242 LTXSNSC 222
L + C
Sbjct: 584 LVLTTPC 590
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -3
Query: 413 TSPLNGLNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAITNPYLPVQVPSTSVYSFC 243
T+P L T L LT +T PC P +L+ +T P L + P + + C
Sbjct: 531 TTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPC 590
Query: 242 LTXSNSC 222
L + C
Sbjct: 591 LVLTTPC 597
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = -3
Query: 395 LNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAITNPYLPVQVPSTSVYSFCLTXSNS 225
L T L LT +T PC P +L+I +T P L + P + + CL +
Sbjct: 474 LTTPCLVLTTPCLVLTTPCLVLTTPCLVLTIPCLVLTTPCLVLTTPCLVLTTPCLVLTTP 533
Query: 224 C 222
C
Sbjct: 534 C 534
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = -3
Query: 413 TSPLNGLNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAITNPYLPVQVPSTSVYSFC 243
T+P L T L LT +T PC P +L+ +T+P L + P + + C
Sbjct: 573 TTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPGLVLTTPGLVLTSPCLVLTTPCLVLTTPC 632
Query: 242 LTXSNSC 222
L + C
Sbjct: 633 LVLTTPC 639
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = -3
Query: 413 TSPLNGLNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAITNPYLPVQVPSTSVYSFC 243
T+P L T L LT +T PC P +L+ +T P L + P + + C
Sbjct: 489 TTPCLVLTTPCLVLTIPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPCLVLTTPC 548
Query: 242 LTXSNSC 222
L + C
Sbjct: 549 LVLTTPC 555
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -3
Query: 413 TSPLNGLNTTALYLTG---YMTNPCPCCMRPAPILSI*VTAITNPYLPVQVPSTSVYSFC 243
T+P L T L LT +T+PC P +L+ +T P L + + S + +FC
Sbjct: 594 TTPCLVLTTPGLVLTTPGLVLTSPCLVLTTPCLVLTTPCLVLTTPCLVLTILSLVLGTFC 653
>SB_25763| Best HMM Match : MgtE_N (HMM E-Value=1.9)
Length = 483
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 101 NHNXTNLIAWXPHRNLSTAEKCSTTFHWSTXFCYIRNISVHNYWXQSN 244
++N + W H N ST ST +WST N S HN W N
Sbjct: 307 HNNWSTYNNWSTHNNWSTYNNWSTHNNWST----YNNWSTHNNWSTYN 350
Score = 31.1 bits (67), Expect = 1.00
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +2
Query: 128 WXPHRNLSTAEKCSTTFHWSTXFCYIRNISVHNYWXQSN 244
W H N ST ST +WST N S HN W N
Sbjct: 304 WSTHNNWSTYNNWSTHNNWST----YNNWSTHNNWSTYN 338
Score = 31.1 bits (67), Expect = 1.00
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +2
Query: 128 WXPHRNLSTAEKCSTTFHWSTXFCYIRNISVHNYWXQSN 244
W N ST + CST +WST N S HN W N
Sbjct: 358 WSILNNWSTYDNCSTYNNWSTH----NNWSTHNNWSTYN 392
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Frame = +2
Query: 128 WXPHRNLSTAEKCSTTFHWST--XFCYIRNISVHNYW-XQSNRSYTLMWKA 271
W H N ST ST +WST + N S HN W N S W A
Sbjct: 376 WSTHNNWSTHNNWSTYNNWSTYNNWSTYDNWSTHNNWSTHDNWSNHNNWSA 426
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +2
Query: 101 NHNXTNLIAWXPHRNLSTAEKCSTTFHWS--TXFCYIRNISVHNYWXQSN 244
++N + W H N ST ST +WS + N S +N W N
Sbjct: 331 HNNWSTYNNWSTHNNWSTYNNWSTHNNWSILNNWSTYDNCSTYNNWSTHN 380
>SB_14700| Best HMM Match : MbeB_N (HMM E-Value=1.8)
Length = 815
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 397 PFKGEVLDGIVTQVNKVGMFAQIGPLKCFISHHSIPD 507
PF +LD ++ + + L C +SHHS+PD
Sbjct: 275 PFGRPLLDSLMEYYLNIRDIQTLAVLTCVMSHHSLPD 311
>SB_25802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 28.7 bits (61), Expect = 5.3
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Frame = -3
Query: 431 VTIPSKTS-PLNGLNTTALYLT----GYMTNPCPCCMRPAPILSI*VTAITNPYLPVQVP 267
V+ P+ T+ P TT LY T Y+T P + AP+ S T + Y P
Sbjct: 26 VSSPTTTATPPYDTTTTPLYDTTATPSYVTTATPSYVTTAPVYSSETTTAASAY-PSSYT 84
Query: 266 STSVYSFCLTXSNSCGPKYFGCNKIXCSNE 177
+ VY T S S P + + S E
Sbjct: 85 AAPVYLSETTTSASAYPPSYTAASVSTSTE 114
>SB_10164| Best HMM Match : Keratin_B2 (HMM E-Value=3.4)
Length = 428
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 333 SHTTWTRVCHVPC*IQ-SCCV*TIQRRSFRWYCHTSK*GWHV 455
S T W +CH PC +Q + V R+ R CH + G HV
Sbjct: 315 SRTLWAIICHAPCGLQVTHLVGYYMSRTLRATCH-APCGLHV 355
>SB_183| Best HMM Match : IBR (HMM E-Value=0.015)
Length = 228
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -2
Query: 474 ERSYLRKHANLIYLCDNTI*N---FSFEWSKHNSFVFNRVHDKPLSMLYETSSD 322
E +LRK +++ LC NT+ F+F ++N V + K L M ET S+
Sbjct: 104 EVQFLRKAVDVLCLCRNTLKYTYVFAFYLKRNNQSVIFEDNQKDLEMATETLSE 157
>SB_31681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 268 GTCTGKYGFVIAVTQIDNIGAGLIQHGQGFVMYPVKYK 381
G + K G IAV ++ I AG+ + G+G+++Y V+Y+
Sbjct: 103 GGSSVKRGDQIAVGALEGINAGIWEKGRGYLVY-VRYE 139
>SB_19401| Best HMM Match : Rop (HMM E-Value=3)
Length = 451
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = -1
Query: 706 IVLHKFQVIVVLIPNSLQLKSRLQKCHSRQLSYQQSLIGSHPLLVLRYPLVYSYNMEDL 530
IV+ F +I L+ L++K ++ K H+ + + S +GS +LV+ + L YS DL
Sbjct: 38 IVVAAFVLITSLLMQ-LRIKVKI-KTHAGRFIFNSSHLGSEFVLVVPHVLPYSEESSDL 94
>SB_36505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/70 (21%), Positives = 32/70 (45%)
Frame = -1
Query: 703 VLHKFQVIVVLIPNSLQLKSRLQKCHSRQLSYQQSLIGSHPLLVLRYPLVYSYNMEDLH* 524
V+H ++ L P + L + H ++ ++I HP ++ +P V + + +H
Sbjct: 27 VIHLHPTVIFLHPTVIHLHPTVLNLHPTIINLHPTVIHIHPTVIHLHPTVINLHPTVIH- 85
Query: 523 GRTPYSLVLN 494
P+ V+N
Sbjct: 86 ---PHPTVIN 92
>SB_24229| Best HMM Match : Fukutin-related (HMM E-Value=0.61)
Length = 604
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = -1
Query: 706 IVLHKFQVIVVLIPNSLQLKSRLQKCHSRQLSYQQSLIGSHPLLVLRYPLVYSYNMEDL 530
IV+ F +I L+ L++K ++ K H+ + + S +GS +LV+ + L YS DL
Sbjct: 251 IVVAAFVLITSLLMQ-LRIKVKI-KTHAGRFIFNSSHLGSEFVLVVPHVLPYSEESSDL 307
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,112,334
Number of Sequences: 59808
Number of extensions: 490260
Number of successful extensions: 1509
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1494
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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