BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_F_H08 (500 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 33 0.024 SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 31 0.074 SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 31 0.13 SPAC3A12.13c |||translation initiation factor eIF3 complex subun... 30 0.22 SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.30 SPBC1348.07 |||S. pombe specific DUF999 protein family 6|Schizos... 29 0.30 SPBPB2B2.14c |||S. pombe specific DUF999 protein family 8|Schizo... 29 0.39 SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 29 0.52 SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schi... 29 0.52 SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 29 0.52 SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 29 0.52 SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 28 0.69 SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 28 0.91 SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 28 0.91 SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 27 1.6 SPAC29A4.12c |mug108||sequence orphan|Schizosaccharomyces pombe|... 27 1.6 SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 27 1.6 SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c... 27 2.1 SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 27 2.1 SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 26 2.8 SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 2.8 SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 2.8 SPBC3B9.06c |apg3||autophagy associated protein Apg3 |Schizosacc... 26 3.7 SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 26 3.7 SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 26 3.7 SPBC32H8.01c ||SPBP22H7.10c|conserved fungal protein|Schizosacch... 25 4.8 SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces po... 25 6.4 SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 25 6.4 SPAC4G9.14 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr 1... 25 6.4 SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 25 6.4 SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 25 6.4 SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 8.4 SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 25 8.4 SPCC70.04c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 25 8.4 SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 25 8.4 >SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schizosaccharomyces pombe|chr 2|||Manual Length = 451 Score = 33.1 bits (72), Expect = 0.024 Identities = 18/72 (25%), Positives = 34/72 (47%) Frame = +3 Query: 72 SGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKE 251 S +D S ++D D SS+ D +E ESS S DSE ++D +++ Sbjct: 238 SSSSDSESESSSEDSDSSSSSSD---SESESSSKDSDSSSNSSDSEDDSSSDSSDSESES 294 Query: 252 ENLEGDVKTTAN 287 + + D ++++ Sbjct: 295 SSEDSDSTSSSS 306 Score = 31.1 bits (67), Expect = 0.097 Identities = 14/75 (18%), Positives = 30/75 (40%) Frame = +3 Query: 63 GKMSGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPD 242 G S ++D + + S+ +E ESS + S DSE++ +++ Sbjct: 106 GSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSS 165 Query: 243 AKEENLEGDVKTTAN 287 + + E + + N Sbjct: 166 SSSSSSESESSSEDN 180 Score = 30.3 bits (65), Expect = 0.17 Identities = 17/69 (24%), Positives = 30/69 (43%) Frame = +3 Query: 63 GKMSGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPD 242 G S + + S++ ED SS+ + E ESS + S DSE++ ++ Sbjct: 215 GSDSSSSSSSSESESSSEDNDSSSSSSDS-ESESSSEDSDSSSSSSDSESESSSKDSDSS 273 Query: 243 AKEENLEGD 269 + + E D Sbjct: 274 SNSSDSEDD 282 Score = 29.5 bits (63), Expect = 0.30 Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 5/77 (6%) Frame = +3 Query: 72 SGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEA-----QGNADVDQ 236 S D+D + S + ++D S + D +E ESS + + DS++ GN++ D Sbjct: 267 SKDSDSSSNSSDSEDDSSSDSSD---SESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDT 323 Query: 237 PDAKEENLEGDVKTTAN 287 + E + + +T++ Sbjct: 324 TTSGEVSAQSSTNSTSS 340 Score = 28.3 bits (60), Expect = 0.69 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 4/70 (5%) Frame = +3 Query: 72 SGDTDKAKISDNQDEDKKS----STGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQP 239 S D+D + S + + + S S+ ++E ESS + S DSE++ +++ Sbjct: 141 SEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDS 200 Query: 240 DAKEENLEGD 269 + + E + Sbjct: 201 SSSSSDSESE 210 Score = 28.3 bits (60), Expect = 0.69 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 4/70 (5%) Frame = +3 Query: 72 SGDTDKAKISDNQDEDKKS----STGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQP 239 S D+D + S + + + S S+ ++E ESS + S DSE++ +++ Sbjct: 195 SEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDS 254 Query: 240 DAKEENLEGD 269 + + E + Sbjct: 255 SSSSSDSESE 264 Score = 27.9 bits (59), Expect = 0.91 Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Frame = +3 Query: 60 VGKMSGDTDKAKISDNQDEDKKSST-GDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQ 236 + K +KA S SS D ++E ESS + S DSE++ +++ Sbjct: 86 ISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSD 145 Query: 237 PDAKEENLEGD 269 + + E + Sbjct: 146 SSSSSSDSESE 156 Score = 27.5 bits (58), Expect = 1.2 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 3/75 (4%) Frame = +3 Query: 72 SGDTDKAKISDNQDEDKKSSTGDGQT---TEDESSQDSKGESLRFQDSEAQGNADVDQPD 242 S + S ++D D SS+ D ++ +ED S S +S SE ++ Sbjct: 166 SSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSS 225 Query: 243 AKEENLEGDVKTTAN 287 E + E + ++++ Sbjct: 226 ESESSSEDNDSSSSS 240 Score = 25.4 bits (53), Expect = 4.8 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Frame = +3 Query: 72 SGDTDKAKISDNQDEDKKSSTGDGQT-TEDESSQDSKGESLRFQDSEAQGNADVDQPDAK 248 S D S + D D SS+ DG + T+ +S + +S S + + D+ +K Sbjct: 294 SSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSK 353 >SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 96 Score = 31.5 bits (68), Expect = 0.074 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Frame = -1 Query: 296 ILTVGCRLYVTF*ILFFCIWLI-YISVT----LGLRILKPQRLTLRVLG*LVFSCLTIAS 132 +LT+ C +V F I +FC L+ YIS + GL+I L + + ++ Sbjct: 6 VLTIRCTFHVLFAICYFCDHLLQYISNSRDSKAGLKIFLVFELAVTIFNTVMLQLANRVK 65 Query: 131 TGFLVFILIVTDFCFI 84 G + ILIV+ F+ Sbjct: 66 NGLTLAILIVSVVMFV 81 >SPAC22A12.14c |||BSD domain protein, unknown biological role|Schizosaccharomyces pombe|chr 1|||Manual Length = 347 Score = 30.7 bits (66), Expect = 0.13 Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = +3 Query: 81 TDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVD-QPDAKEEN 257 +D+ + + Q D+K + + TTE+ S+ + E++ +S ++ QP + + Sbjct: 241 SDEEESDNEQVNDEKKQSSEEDTTENNSAAEVIDETVNDLESAVSKGLQIETQPASHDGE 300 Query: 258 LEGDVK 275 ++G+VK Sbjct: 301 VDGEVK 306 Score = 25.0 bits (52), Expect = 6.4 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 2/80 (2%) Frame = +3 Query: 39 EFAFNFFVGKMSGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSE--A 212 +F FF K KA I DE++ S GD ++ E+ES + + + E Sbjct: 206 DFWKRFFWHKEVVQPIKA-IQSGNDEEEIFSWGDERSDEEESDNEQVNDEKKQSSEEDTT 264 Query: 213 QGNADVDQPDAKEENLEGDV 272 + N+ + D +LE V Sbjct: 265 ENNSAAEVIDETVNDLESAV 284 >SPAC3A12.13c |||translation initiation factor eIF3 complex subunit|Schizosaccharomyces pombe|chr 1|||Manual Length = 274 Score = 29.9 bits (64), Expect = 0.22 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 2/80 (2%) Frame = +3 Query: 48 FNFFVGKMSGDTDKAK--ISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGN 221 F+F +GK S + K K D +DED++ + Q SQ S S Q+ + Sbjct: 18 FDFPLGKDSQSSSKPKKRFDDEEDEDEEENKESLQNDSHSVSQKSSSSS---QNDQGSNK 74 Query: 222 ADVDQPDAKEENLEGDVKTT 281 Q +E N E +K + Sbjct: 75 MTRIQQKIQERNFEKAIKAS 94 >SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 2685 Score = 29.5 bits (63), Expect = 0.30 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 11/68 (16%) Frame = +3 Query: 99 SDNQDEDKKSSTGDGQTTEDESSQDSKGESLR--FQD---------SEAQGNADVDQPDA 245 SD D D SS TTE+ ++Q K E L F+D S N VD+ A Sbjct: 981 SDIDDNDSNSSNTSNHTTENANAQQRKLEDLNRSFEDFLGSRPTNNSSFLKNVSVDEDTA 1040 Query: 246 KEENLEGD 269 +E+ +E D Sbjct: 1041 REKLMEYD 1048 >SPBC1348.07 |||S. pombe specific DUF999 protein family 6|Schizosaccharomyces pombe|chr 2|||Manual Length = 230 Score = 29.5 bits (63), Expect = 0.30 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Frame = -1 Query: 380 VCLTILLLFSITIGFILFIFGVITAGLVILTVGCRLYVTF*-ILFFCIWLIYISVTLGLR 204 +CL ILLL + + + + +VI V + V IL+ C WLIY + L Sbjct: 128 ICLFILLLLGLIYCSKIVVKAIPLISIVIAAVVVIIAVAMVKILYICHWLIYKILILAFG 187 Query: 203 I-LKPQRLTL 177 I +KP TL Sbjct: 188 IKVKPLGDTL 197 >SPBPB2B2.14c |||S. pombe specific DUF999 protein family 8|Schizosaccharomyces pombe|chr 2|||Manual Length = 230 Score = 29.1 bits (62), Expect = 0.39 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Frame = -1 Query: 380 VCLTILLLFSITIGFILFIFGVITAGLVILTVGCRLYVTF*-ILFFCIWLIYISVTLGLR 204 +CL +LLL + + + + +VI V + V IL+ C WLIY + L Sbjct: 128 ICLFVLLLLGLIYCSKIVVKAIPLISIVIAAVVVIIAVAMVKILYICHWLIYKILILAFG 187 Query: 203 I-LKPQRLTL 177 I +KP TL Sbjct: 188 IKVKPLGDTL 197 >SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces pombe|chr 1|||Manual Length = 630 Score = 28.7 bits (61), Expect = 0.52 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 2/74 (2%) Frame = +3 Query: 66 KMSGDTDKAKISDNQ--DEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQP 239 K+S D I++ + D DK+ +T D + E+E+ +++ + + Q P Sbjct: 265 KVSADASVQDIAEKESLDADKELATNDQEDDEEENQAETQKDGAISNNENMQSEVQTTNP 324 Query: 240 DAKEENLEGDVKTT 281 A + K T Sbjct: 325 SASTSAVTNITKPT 338 >SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schizosaccharomyces pombe|chr 2|||Manual Length = 965 Score = 28.7 bits (61), Expect = 0.52 Identities = 19/62 (30%), Positives = 31/62 (50%) Frame = +3 Query: 78 DTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEEN 257 + +KA N DE K D +TTE++ + + + + QD GN+ ++P K E Sbjct: 830 EREKASKGSNDDEMKI----DKKTTEEKEATPMEMDEEKSQDISINGNSKKEEP--KSET 883 Query: 258 LE 263 LE Sbjct: 884 LE 885 >SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 830 Score = 28.7 bits (61), Expect = 0.52 Identities = 15/55 (27%), Positives = 30/55 (54%) Frame = +3 Query: 111 DEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEENLEGDVK 275 +ED + G+ EDE +D GE + + + Q N ++D+ D +E + + D++ Sbjct: 50 EEDIEDLDGEALDVEDEEGEDLFGEGM---ERDYQQNLELDRYDIEELDDDNDLE 101 >SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr 2|||Manual Length = 432 Score = 28.7 bits (61), Expect = 0.52 Identities = 14/55 (25%), Positives = 29/55 (52%) Frame = +3 Query: 102 DNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEENLEG 266 DN++EDK+ + + + T+DE + K ++ Q+ V QP + ++ +G Sbjct: 196 DNKEEDKEIHSEENE-TKDEIKSEKKEPEIKKQEG-GSSTEKVGQPSSSDDKAKG 248 >SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizosaccharomyces pombe|chr 1|||Manual Length = 302 Score = 28.3 bits (60), Expect = 0.69 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +3 Query: 69 MSGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQG 218 +S D D+ +ISD ED S +T+E E + S+ ES +D + +G Sbjct: 214 VSDDEDEEEISDL--EDWLGSDQSMETSESEEEESSESESDEDEDEDNKG 261 >SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizosaccharomyces pombe|chr 3|||Manual Length = 1010 Score = 27.9 bits (59), Expect = 0.91 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Frame = +3 Query: 81 TDKAKISDNQDEDKKSSTGDGQTTEDESSQ-DSKGESLRFQDSEAQGNADVDQP 239 T +S + ++ + TG+G EDE D+ E L QD E + + + P Sbjct: 99 TTSPSLSASHEKPARPQTGEGSDNEDEDEDIDALIEDLYSQDQEEEQVEEEESP 152 >SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces pombe|chr 1|||Manual Length = 960 Score = 27.9 bits (59), Expect = 0.91 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 8/83 (9%) Frame = +3 Query: 63 GKMSGDTDKAKISDN---QDEDKKS---STGDGQTTEDESSQDSKGESLRFQDSEAQGNA 224 GK+S D ++ K+S + KK+ S QTT D S+ K S D N Sbjct: 383 GKISTDMEECKVSKSILKTTPSKKANARSVSFTQTTTDTLSESEKFASNVDLDENFDFNV 442 Query: 225 DVDQPDAKE--ENLEGDVKTTAN 287 +V DAK+ +++ G TT N Sbjct: 443 NVTNEDAKQLKKSVIGSSWTTVN 465 >SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 568 Score = 27.1 bits (57), Expect = 1.6 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = +3 Query: 81 TDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGE-SLRFQDSEAQGNADVDQPDAKEEN 257 TD+ + DN+D+ K S G Q E+E++ SK S +A + +V D E+ Sbjct: 486 TDQKQNEDNEDKVKADSNGPTQ-NENETADASKDMISEEKSSKDADNSLEVAGKDFAEDG 544 Query: 258 LE 263 E Sbjct: 545 TE 546 >SPAC29A4.12c |mug108||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 150 Score = 27.1 bits (57), Expect = 1.6 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +3 Query: 108 QDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNAD 227 ++ED S+ T ED DS+ ES R + S+ G + Sbjct: 54 EEEDDMESSSYHATQEDIGDDDSRSESTRNRSSQHTGRVN 93 >SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizosaccharomyces pombe|chr 1|||Manual Length = 1604 Score = 27.1 bits (57), Expect = 1.6 Identities = 16/73 (21%), Positives = 33/73 (45%) Frame = +3 Query: 66 KMSGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDA 245 K++ DT K + + KKS + ++ +S ++G+ DS GN+ +A Sbjct: 541 KLANDTSKNANGETKSTPKKSKKKTSKAQQEANSTTAEGKEKLSGDSTETGNS--TNKEA 598 Query: 246 KEENLEGDVKTTA 284 E+ + + +A Sbjct: 599 STEDTKANATASA 611 >SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 436 Score = 26.6 bits (56), Expect = 2.1 Identities = 17/74 (22%), Positives = 36/74 (48%) Frame = +3 Query: 33 RLEFAFNFFVGKMSGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEA 212 +L+ + F+ + TDK K S Q+E+ +++ +T ++ SK + Q+ +A Sbjct: 144 QLDSQYEAFITQGESQTDKKKTSTVQEEELQNAGKKLETVQENPQAYSK---VTQQEPQA 200 Query: 213 QGNADVDQPDAKEE 254 A +P A ++ Sbjct: 201 GQKAVPQEPQANQQ 214 >SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pombe|chr 2|||Manual Length = 569 Score = 26.6 bits (56), Expect = 2.1 Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = +3 Query: 63 GKMSGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQ-DSKGESLRFQDSEAQGNADVDQP 239 GK D KAK +D+ + + K D + TED+ + +SK ++ ++++ + +VD Sbjct: 452 GKTETDV-KAKETDSIEANDKDEKTDSKETEDKVEETESKEADVKAKETD---SIEVDDK 507 Query: 240 DAKEENLE 263 + K ++ E Sbjct: 508 EEKTDSKE 515 >SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces pombe|chr 3|||Manual Length = 1690 Score = 26.2 bits (55), Expect = 2.8 Identities = 19/69 (27%), Positives = 32/69 (46%) Frame = +3 Query: 81 TDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEENL 260 TD + + D +D T D + EDE + K +S RF D E D+D+ + + Sbjct: 1378 TDGSTVFDKLADD----TEDSEDEEDEEPKRKKSKSDRFDDEE----KDLDEIPSTAADF 1429 Query: 261 EGDVKTTAN 287 E + ++ N Sbjct: 1430 ERQLLSSPN 1438 >SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||Manual Length = 500 Score = 26.2 bits (55), Expect = 2.8 Identities = 14/52 (26%), Positives = 29/52 (55%) Frame = +3 Query: 99 SDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEE 254 ++ + E S+ D +++ D SS+ G+S DSE++ +++ D+ K E Sbjct: 194 TEEKKEGSSESSSDSESSSDSSSES--GDSDSSSDSESESSSE-DEKKRKAE 242 >SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 215 Score = 26.2 bits (55), Expect = 2.8 Identities = 10/36 (27%), Positives = 18/36 (50%) Frame = +3 Query: 96 ISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQD 203 +SDN DE++ S G ++ E D + R ++ Sbjct: 168 VSDNTDEERTESKGQQESNSAEEYDDDDSDEDRMEE 203 >SPBC3B9.06c |apg3||autophagy associated protein Apg3 |Schizosaccharomyces pombe|chr 2|||Manual Length = 275 Score = 25.8 bits (54), Expect = 3.7 Identities = 12/43 (27%), Positives = 22/43 (51%) Frame = +3 Query: 78 DTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDS 206 +TD + D+ +D S+ T++ S++ KG+S DS Sbjct: 93 ETDDTRNKDDDQDDDAISSIHSDTSDIASAERLKGQSKELSDS 135 >SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe|chr 3|||Manual Length = 565 Score = 25.8 bits (54), Expect = 3.7 Identities = 12/51 (23%), Positives = 26/51 (50%) Frame = +3 Query: 105 NQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEEN 257 N+ E ++ G+ +T ++S KG+ +DS + A + + DA ++ Sbjct: 421 NKSEQEEKENGNDETRSNDSLVSGKGKGEENEDSVFETRAKIYRFDATSKS 471 >SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces pombe|chr 3|||Manual Length = 262 Score = 25.8 bits (54), Expect = 3.7 Identities = 14/59 (23%), Positives = 28/59 (47%) Frame = +3 Query: 78 DTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEE 254 D D+ + + DE ++ +G+ E+E +D G+ D + +G D + +EE Sbjct: 173 DADEEEEEEEADEMEEEFDEEGEGDEEEEEEDD-GDGDGEGDGDGEGENDGKGSEEEEE 230 >SPBC32H8.01c ||SPBP22H7.10c|conserved fungal protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 187 Score = 25.4 bits (53), Expect = 4.8 Identities = 19/61 (31%), Positives = 31/61 (50%) Frame = +3 Query: 78 DTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEEN 257 DT+K + D +K +TG+ Q ES Q+ +L Q +E + DVD A+ E+ Sbjct: 75 DTNKLEAKDESKNVEKDATGNPQ----ESKQE---PNLEVQQTEKE--KDVDSASAENES 125 Query: 258 L 260 + Sbjct: 126 I 126 >SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces pombe|chr 2|||Manual Length = 460 Score = 25.0 bits (52), Expect = 6.4 Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 1/25 (4%) Frame = -1 Query: 413 ITLHIVFFIFIVCLTILL-LFSITI 342 I++ VFFI +VCL ++ +F+I I Sbjct: 425 ISILFVFFIILVCLAVIFYVFNIRI 449 >SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 555 Score = 25.0 bits (52), Expect = 6.4 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = +3 Query: 153 EDESSQDSKGESLRFQDSEAQGNADVDQPDAKEEN 257 E+E + K + +R Q+ E NAD D D+ + Sbjct: 493 EEEKREREKSKGIRGQEEEFIENADEDNNDSSSSS 527 >SPAC4G9.14 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr 1|||Manual Length = 221 Score = 25.0 bits (52), Expect = 6.4 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -1 Query: 107 IVTDFCFIGITRHFSYEEIESEFQ 36 IV F F+GIT SYE ++S F+ Sbjct: 142 IVFFFLFMGITECKSYERLKSYFR 165 >SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 649 Score = 25.0 bits (52), Expect = 6.4 Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = +3 Query: 81 TDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRF--QDSEAQGNADVDQPDAKEE 254 T + K S + +++ SST + T + + S+ E+++ + + + + KEE Sbjct: 300 TLRKKKSIPKKQNESSSTIQKENTVQQEASSSEEEAVKSLPETQRTTSRIETQEEEIKEE 359 Query: 255 NLEGD 269 +EG+ Sbjct: 360 EMEGE 364 >SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosaccharomyces pombe|chr 2|||Manual Length = 834 Score = 25.0 bits (52), Expect = 6.4 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +3 Query: 102 DNQDEDKKSSTGDGQTTEDESSQDSK 179 D +ED++ S ++ EDES D K Sbjct: 373 DENEEDEEDSEETSESEEDESVNDEK 398 >SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 230 Score = 24.6 bits (51), Expect = 8.4 Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%) Frame = -1 Query: 407 LHIVFFIFI-VCLTILLLFSIT 345 LH +FF F+ VC+ + LFS++ Sbjct: 153 LHFLFFFFLCVCVFLSFLFSLS 174 >SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomerase|Schizosaccharomyces pombe|chr 2|||Manual Length = 361 Score = 24.6 bits (51), Expect = 8.4 Identities = 12/54 (22%), Positives = 27/54 (50%) Frame = +3 Query: 96 ISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEEN 257 +S +++ ++ +GD ++ E+ S+D+ DS A V + K+E+ Sbjct: 139 LSPTEEDLVETVSGDEESEEESESEDNSASEEDELDSAPAKKAQVKKKRTKDES 192 >SPCC70.04c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual Length = 244 Score = 24.6 bits (51), Expect = 8.4 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Frame = -1 Query: 404 HIVFFIFIVCLTILLLFSITIGFILFIFGVITAGLVILTVGCRLYVT--F*ILFFCIWLI 231 H++F TI I+ GF + + + LV +T+ +VT F I F + Sbjct: 150 HLMFLTTNYSYTINSTLDISKGFFINVLSTMVQALVTVTIAFTKFVTIDFPIYVFSSLFL 209 Query: 230 Y 228 Y Sbjct: 210 Y 210 >SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosaccharomyces pombe|chr 2|||Manual Length = 518 Score = 24.6 bits (51), Expect = 8.4 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 9/55 (16%) Frame = +3 Query: 123 KSSTG-DGQTTEDESSQDSKGESLRFQDS--------EAQGNADVDQPDAKEENL 260 KS G +G+TTE + D++G+S FQ S + Q +A +PD +E L Sbjct: 464 KSHIGLNGETTELIENTDNQGDSGSFQTSTPDDSRPEQNQASATYIRPDKREPRL 518 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,473,127 Number of Sequences: 5004 Number of extensions: 25521 Number of successful extensions: 180 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 158 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 177 length of database: 2,362,478 effective HSP length: 68 effective length of database: 2,022,206 effective search space used: 198176188 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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