Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_H08
(500 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 33 0.024
SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 31 0.074
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 31 0.13
SPAC3A12.13c |||translation initiation factor eIF3 complex subun... 30 0.22
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.30
SPBC1348.07 |||S. pombe specific DUF999 protein family 6|Schizos... 29 0.30
SPBPB2B2.14c |||S. pombe specific DUF999 protein family 8|Schizo... 29 0.39
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 29 0.52
SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schi... 29 0.52
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 29 0.52
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 29 0.52
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 28 0.69
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 28 0.91
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 28 0.91
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 27 1.6
SPAC29A4.12c |mug108||sequence orphan|Schizosaccharomyces pombe|... 27 1.6
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 27 1.6
SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c... 27 2.1
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 27 2.1
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 26 2.8
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 2.8
SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 2.8
SPBC3B9.06c |apg3||autophagy associated protein Apg3 |Schizosacc... 26 3.7
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 26 3.7
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 26 3.7
SPBC32H8.01c ||SPBP22H7.10c|conserved fungal protein|Schizosacch... 25 4.8
SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces po... 25 6.4
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 25 6.4
SPAC4G9.14 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr 1... 25 6.4
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 25 6.4
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 25 6.4
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 8.4
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 25 8.4
SPCC70.04c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 25 8.4
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 25 8.4
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 33.1 bits (72), Expect = 0.024
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +3
Query: 72 SGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKE 251
S +D S ++D D SS+ D +E ESS S DSE ++D +++
Sbjct: 238 SSSSDSESESSSEDSDSSSSSSD---SESESSSKDSDSSSNSSDSEDDSSSDSSDSESES 294
Query: 252 ENLEGDVKTTAN 287
+ + D ++++
Sbjct: 295 SSEDSDSTSSSS 306
Score = 31.1 bits (67), Expect = 0.097
Identities = 14/75 (18%), Positives = 30/75 (40%)
Frame = +3
Query: 63 GKMSGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPD 242
G S ++D + + S+ +E ESS + S DSE++ +++
Sbjct: 106 GSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSS 165
Query: 243 AKEENLEGDVKTTAN 287
+ + E + + N
Sbjct: 166 SSSSSSESESSSEDN 180
Score = 30.3 bits (65), Expect = 0.17
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +3
Query: 63 GKMSGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPD 242
G S + + S++ ED SS+ + E ESS + S DSE++ ++
Sbjct: 215 GSDSSSSSSSSESESSSEDNDSSSSSSDS-ESESSSEDSDSSSSSSDSESESSSKDSDSS 273
Query: 243 AKEENLEGD 269
+ + E D
Sbjct: 274 SNSSDSEDD 282
Score = 29.5 bits (63), Expect = 0.30
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +3
Query: 72 SGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEA-----QGNADVDQ 236
S D+D + S + ++D S + D +E ESS + + DS++ GN++ D
Sbjct: 267 SKDSDSSSNSSDSEDDSSSDSSD---SESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDT 323
Query: 237 PDAKEENLEGDVKTTAN 287
+ E + + +T++
Sbjct: 324 TTSGEVSAQSSTNSTSS 340
Score = 28.3 bits (60), Expect = 0.69
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +3
Query: 72 SGDTDKAKISDNQDEDKKS----STGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQP 239
S D+D + S + + + S S+ ++E ESS + S DSE++ +++
Sbjct: 141 SEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDS 200
Query: 240 DAKEENLEGD 269
+ + E +
Sbjct: 201 SSSSSDSESE 210
Score = 28.3 bits (60), Expect = 0.69
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +3
Query: 72 SGDTDKAKISDNQDEDKKS----STGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQP 239
S D+D + S + + + S S+ ++E ESS + S DSE++ +++
Sbjct: 195 SEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDS 254
Query: 240 DAKEENLEGD 269
+ + E +
Sbjct: 255 SSSSSDSESE 264
Score = 27.9 bits (59), Expect = 0.91
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +3
Query: 60 VGKMSGDTDKAKISDNQDEDKKSST-GDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQ 236
+ K +KA S SS D ++E ESS + S DSE++ +++
Sbjct: 86 ISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSD 145
Query: 237 PDAKEENLEGD 269
+ + E +
Sbjct: 146 SSSSSSDSESE 156
Score = 27.5 bits (58), Expect = 1.2
Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 72 SGDTDKAKISDNQDEDKKSSTGDGQT---TEDESSQDSKGESLRFQDSEAQGNADVDQPD 242
S + S ++D D SS+ D ++ +ED S S +S SE ++
Sbjct: 166 SSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSS 225
Query: 243 AKEENLEGDVKTTAN 287
E + E + ++++
Sbjct: 226 ESESSSEDNDSSSSS 240
Score = 25.4 bits (53), Expect = 4.8
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +3
Query: 72 SGDTDKAKISDNQDEDKKSSTGDGQT-TEDESSQDSKGESLRFQDSEAQGNADVDQPDAK 248
S D S + D D SS+ DG + T+ +S + +S S + + D+ +K
Sbjct: 294 SSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSK 353
>SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 31.5 bits (68), Expect = 0.074
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Frame = -1
Query: 296 ILTVGCRLYVTF*ILFFCIWLI-YISVT----LGLRILKPQRLTLRVLG*LVFSCLTIAS 132
+LT+ C +V F I +FC L+ YIS + GL+I L + + ++
Sbjct: 6 VLTIRCTFHVLFAICYFCDHLLQYISNSRDSKAGLKIFLVFELAVTIFNTVMLQLANRVK 65
Query: 131 TGFLVFILIVTDFCFI 84
G + ILIV+ F+
Sbjct: 66 NGLTLAILIVSVVMFV 81
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 30.7 bits (66), Expect = 0.13
Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 81 TDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVD-QPDAKEEN 257
+D+ + + Q D+K + + TTE+ S+ + E++ +S ++ QP + +
Sbjct: 241 SDEEESDNEQVNDEKKQSSEEDTTENNSAAEVIDETVNDLESAVSKGLQIETQPASHDGE 300
Query: 258 LEGDVK 275
++G+VK
Sbjct: 301 VDGEVK 306
Score = 25.0 bits (52), Expect = 6.4
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 39 EFAFNFFVGKMSGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSE--A 212
+F FF K KA I DE++ S GD ++ E+ES + + + E
Sbjct: 206 DFWKRFFWHKEVVQPIKA-IQSGNDEEEIFSWGDERSDEEESDNEQVNDEKKQSSEEDTT 264
Query: 213 QGNADVDQPDAKEENLEGDV 272
+ N+ + D +LE V
Sbjct: 265 ENNSAAEVIDETVNDLESAV 284
>SPAC3A12.13c |||translation initiation factor eIF3 complex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 274
Score = 29.9 bits (64), Expect = 0.22
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 48 FNFFVGKMSGDTDKAK--ISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGN 221
F+F +GK S + K K D +DED++ + Q SQ S S Q+ +
Sbjct: 18 FDFPLGKDSQSSSKPKKRFDDEEDEDEEENKESLQNDSHSVSQKSSSSS---QNDQGSNK 74
Query: 222 ADVDQPDAKEENLEGDVKTT 281
Q +E N E +K +
Sbjct: 75 MTRIQQKIQERNFEKAIKAS 94
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 29.5 bits (63), Expect = 0.30
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Frame = +3
Query: 99 SDNQDEDKKSSTGDGQTTEDESSQDSKGESLR--FQD---------SEAQGNADVDQPDA 245
SD D D SS TTE+ ++Q K E L F+D S N VD+ A
Sbjct: 981 SDIDDNDSNSSNTSNHTTENANAQQRKLEDLNRSFEDFLGSRPTNNSSFLKNVSVDEDTA 1040
Query: 246 KEENLEGD 269
+E+ +E D
Sbjct: 1041 REKLMEYD 1048
>SPBC1348.07 |||S. pombe specific DUF999 protein family
6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 29.5 bits (63), Expect = 0.30
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -1
Query: 380 VCLTILLLFSITIGFILFIFGVITAGLVILTVGCRLYVTF*-ILFFCIWLIYISVTLGLR 204
+CL ILLL + + + + +VI V + V IL+ C WLIY + L
Sbjct: 128 ICLFILLLLGLIYCSKIVVKAIPLISIVIAAVVVIIAVAMVKILYICHWLIYKILILAFG 187
Query: 203 I-LKPQRLTL 177
I +KP TL
Sbjct: 188 IKVKPLGDTL 197
>SPBPB2B2.14c |||S. pombe specific DUF999 protein family
8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 29.1 bits (62), Expect = 0.39
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -1
Query: 380 VCLTILLLFSITIGFILFIFGVITAGLVILTVGCRLYVTF*-ILFFCIWLIYISVTLGLR 204
+CL +LLL + + + + +VI V + V IL+ C WLIY + L
Sbjct: 128 ICLFVLLLLGLIYCSKIVVKAIPLISIVIAAVVVIIAVAMVKILYICHWLIYKILILAFG 187
Query: 203 I-LKPQRLTL 177
I +KP TL
Sbjct: 188 IKVKPLGDTL 197
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 28.7 bits (61), Expect = 0.52
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +3
Query: 66 KMSGDTDKAKISDNQ--DEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQP 239
K+S D I++ + D DK+ +T D + E+E+ +++ + + Q P
Sbjct: 265 KVSADASVQDIAEKESLDADKELATNDQEDDEEENQAETQKDGAISNNENMQSEVQTTNP 324
Query: 240 DAKEENLEGDVKTT 281
A + K T
Sbjct: 325 SASTSAVTNITKPT 338
>SPBC17D11.07c |rpn2||19S proteasome regulatory subunit
Rpn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 965
Score = 28.7 bits (61), Expect = 0.52
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 78 DTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEEN 257
+ +KA N DE K D +TTE++ + + + + QD GN+ ++P K E
Sbjct: 830 EREKASKGSNDDEMKI----DKKTTEEKEATPMEMDEEKSQDISINGNSKKEEP--KSET 883
Query: 258 LE 263
LE
Sbjct: 884 LE 885
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 28.7 bits (61), Expect = 0.52
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +3
Query: 111 DEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEENLEGDVK 275
+ED + G+ EDE +D GE + + + Q N ++D+ D +E + + D++
Sbjct: 50 EEDIEDLDGEALDVEDEEGEDLFGEGM---ERDYQQNLELDRYDIEELDDDNDLE 101
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 28.7 bits (61), Expect = 0.52
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +3
Query: 102 DNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEENLEG 266
DN++EDK+ + + + T+DE + K ++ Q+ V QP + ++ +G
Sbjct: 196 DNKEEDKEIHSEENE-TKDEIKSEKKEPEIKKQEG-GSSTEKVGQPSSSDDKAKG 248
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 28.3 bits (60), Expect = 0.69
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 69 MSGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQG 218
+S D D+ +ISD ED S +T+E E + S+ ES +D + +G
Sbjct: 214 VSDDEDEEEISDL--EDWLGSDQSMETSESEEEESSESESDEDEDEDNKG 261
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 27.9 bits (59), Expect = 0.91
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 81 TDKAKISDNQDEDKKSSTGDGQTTEDESSQ-DSKGESLRFQDSEAQGNADVDQP 239
T +S + ++ + TG+G EDE D+ E L QD E + + + P
Sbjct: 99 TTSPSLSASHEKPARPQTGEGSDNEDEDEDIDALIEDLYSQDQEEEQVEEEESP 152
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 27.9 bits (59), Expect = 0.91
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Frame = +3
Query: 63 GKMSGDTDKAKISDN---QDEDKKS---STGDGQTTEDESSQDSKGESLRFQDSEAQGNA 224
GK+S D ++ K+S + KK+ S QTT D S+ K S D N
Sbjct: 383 GKISTDMEECKVSKSILKTTPSKKANARSVSFTQTTTDTLSESEKFASNVDLDENFDFNV 442
Query: 225 DVDQPDAKE--ENLEGDVKTTAN 287
+V DAK+ +++ G TT N
Sbjct: 443 NVTNEDAKQLKKSVIGSSWTTVN 465
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 27.1 bits (57), Expect = 1.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 81 TDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGE-SLRFQDSEAQGNADVDQPDAKEEN 257
TD+ + DN+D+ K S G Q E+E++ SK S +A + +V D E+
Sbjct: 486 TDQKQNEDNEDKVKADSNGPTQ-NENETADASKDMISEEKSSKDADNSLEVAGKDFAEDG 544
Query: 258 LE 263
E
Sbjct: 545 TE 546
>SPAC29A4.12c |mug108||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 27.1 bits (57), Expect = 1.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 108 QDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNAD 227
++ED S+ T ED DS+ ES R + S+ G +
Sbjct: 54 EEEDDMESSSYHATQEDIGDDDSRSESTRNRSSQHTGRVN 93
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 27.1 bits (57), Expect = 1.6
Identities = 16/73 (21%), Positives = 33/73 (45%)
Frame = +3
Query: 66 KMSGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDA 245
K++ DT K + + KKS + ++ +S ++G+ DS GN+ +A
Sbjct: 541 KLANDTSKNANGETKSTPKKSKKKTSKAQQEANSTTAEGKEKLSGDSTETGNS--TNKEA 598
Query: 246 KEENLEGDVKTTA 284
E+ + + +A
Sbjct: 599 STEDTKANATASA 611
>SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 436
Score = 26.6 bits (56), Expect = 2.1
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +3
Query: 33 RLEFAFNFFVGKMSGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEA 212
+L+ + F+ + TDK K S Q+E+ +++ +T ++ SK + Q+ +A
Sbjct: 144 QLDSQYEAFITQGESQTDKKKTSTVQEEELQNAGKKLETVQENPQAYSK---VTQQEPQA 200
Query: 213 QGNADVDQPDAKEE 254
A +P A ++
Sbjct: 201 GQKAVPQEPQANQQ 214
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 26.6 bits (56), Expect = 2.1
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +3
Query: 63 GKMSGDTDKAKISDNQDEDKKSSTGDGQTTEDESSQ-DSKGESLRFQDSEAQGNADVDQP 239
GK D KAK +D+ + + K D + TED+ + +SK ++ ++++ + +VD
Sbjct: 452 GKTETDV-KAKETDSIEANDKDEKTDSKETEDKVEETESKEADVKAKETD---SIEVDDK 507
Query: 240 DAKEENLE 263
+ K ++ E
Sbjct: 508 EEKTDSKE 515
>SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1690
Score = 26.2 bits (55), Expect = 2.8
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +3
Query: 81 TDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEENL 260
TD + + D +D T D + EDE + K +S RF D E D+D+ + +
Sbjct: 1378 TDGSTVFDKLADD----TEDSEDEEDEEPKRKKSKSDRFDDEE----KDLDEIPSTAADF 1429
Query: 261 EGDVKTTAN 287
E + ++ N
Sbjct: 1430 ERQLLSSPN 1438
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 2.8
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +3
Query: 99 SDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEE 254
++ + E S+ D +++ D SS+ G+S DSE++ +++ D+ K E
Sbjct: 194 TEEKKEGSSESSSDSESSSDSSSES--GDSDSSSDSESESSSE-DEKKRKAE 242
>SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 215
Score = 26.2 bits (55), Expect = 2.8
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 96 ISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQD 203
+SDN DE++ S G ++ E D + R ++
Sbjct: 168 VSDNTDEERTESKGQQESNSAEEYDDDDSDEDRMEE 203
>SPBC3B9.06c |apg3||autophagy associated protein Apg3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 275
Score = 25.8 bits (54), Expect = 3.7
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 78 DTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDS 206
+TD + D+ +D S+ T++ S++ KG+S DS
Sbjct: 93 ETDDTRNKDDDQDDDAISSIHSDTSDIASAERLKGQSKELSDS 135
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 25.8 bits (54), Expect = 3.7
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +3
Query: 105 NQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEEN 257
N+ E ++ G+ +T ++S KG+ +DS + A + + DA ++
Sbjct: 421 NKSEQEEKENGNDETRSNDSLVSGKGKGEENEDSVFETRAKIYRFDATSKS 471
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 3.7
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = +3
Query: 78 DTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEE 254
D D+ + + DE ++ +G+ E+E +D G+ D + +G D + +EE
Sbjct: 173 DADEEEEEEEADEMEEEFDEEGEGDEEEEEEDD-GDGDGEGDGDGEGENDGKGSEEEEE 230
>SPBC32H8.01c ||SPBP22H7.10c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 187
Score = 25.4 bits (53), Expect = 4.8
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 78 DTDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEEN 257
DT+K + D +K +TG+ Q ES Q+ +L Q +E + DVD A+ E+
Sbjct: 75 DTNKLEAKDESKNVEKDATGNPQ----ESKQE---PNLEVQQTEKE--KDVDSASAENES 125
Query: 258 L 260
+
Sbjct: 126 I 126
>SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 460
Score = 25.0 bits (52), Expect = 6.4
Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = -1
Query: 413 ITLHIVFFIFIVCLTILL-LFSITI 342
I++ VFFI +VCL ++ +F+I I
Sbjct: 425 ISILFVFFIILVCLAVIFYVFNIRI 449
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 25.0 bits (52), Expect = 6.4
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 153 EDESSQDSKGESLRFQDSEAQGNADVDQPDAKEEN 257
E+E + K + +R Q+ E NAD D D+ +
Sbjct: 493 EEEKREREKSKGIRGQEEEFIENADEDNNDSSSSS 527
>SPAC4G9.14 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 221
Score = 25.0 bits (52), Expect = 6.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 107 IVTDFCFIGITRHFSYEEIESEFQ 36
IV F F+GIT SYE ++S F+
Sbjct: 142 IVFFFLFMGITECKSYERLKSYFR 165
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 25.0 bits (52), Expect = 6.4
Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 81 TDKAKISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRF--QDSEAQGNADVDQPDAKEE 254
T + K S + +++ SST + T + + S+ E+++ + + + + KEE
Sbjct: 300 TLRKKKSIPKKQNESSSTIQKENTVQQEASSSEEEAVKSLPETQRTTSRIETQEEEIKEE 359
Query: 255 NLEGD 269
+EG+
Sbjct: 360 EMEGE 364
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 25.0 bits (52), Expect = 6.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 102 DNQDEDKKSSTGDGQTTEDESSQDSK 179
D +ED++ S ++ EDES D K
Sbjct: 373 DENEEDEEDSEETSESEEDESVNDEK 398
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 24.6 bits (51), Expect = 8.4
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -1
Query: 407 LHIVFFIFI-VCLTILLLFSIT 345
LH +FF F+ VC+ + LFS++
Sbjct: 153 LHFLFFFFLCVCVFLSFLFSLS 174
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 24.6 bits (51), Expect = 8.4
Identities = 12/54 (22%), Positives = 27/54 (50%)
Frame = +3
Query: 96 ISDNQDEDKKSSTGDGQTTEDESSQDSKGESLRFQDSEAQGNADVDQPDAKEEN 257
+S +++ ++ +GD ++ E+ S+D+ DS A V + K+E+
Sbjct: 139 LSPTEEDLVETVSGDEESEEESESEDNSASEEDELDSAPAKKAQVKKKRTKDES 192
>SPCC70.04c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 24.6 bits (51), Expect = 8.4
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -1
Query: 404 HIVFFIFIVCLTILLLFSITIGFILFIFGVITAGLVILTVGCRLYVT--F*ILFFCIWLI 231
H++F TI I+ GF + + + LV +T+ +VT F I F +
Sbjct: 150 HLMFLTTNYSYTINSTLDISKGFFINVLSTMVQALVTVTIAFTKFVTIDFPIYVFSSLFL 209
Query: 230 Y 228
Y
Sbjct: 210 Y 210
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 24.6 bits (51), Expect = 8.4
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 9/55 (16%)
Frame = +3
Query: 123 KSSTG-DGQTTEDESSQDSKGESLRFQDS--------EAQGNADVDQPDAKEENL 260
KS G +G+TTE + D++G+S FQ S + Q +A +PD +E L
Sbjct: 464 KSHIGLNGETTELIENTDNQGDSGSFQTSTPDDSRPEQNQASATYIRPDKREPRL 518
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,473,127
Number of Sequences: 5004
Number of extensions: 25521
Number of successful extensions: 180
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 198176188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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