Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_H05
(644 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 89 3e-18
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 89 3e-18
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 84 7e-17
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 84 7e-17
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 81 5e-16
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 81 5e-16
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 76 2e-14
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 76 2e-14
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 32 0.40
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 32 0.40
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 31 0.92
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 29 3.7
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 3.7
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 3.7
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 3.7
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 3.7
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 29 3.7
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 88.6 bits (210), Expect = 3e-18
Identities = 62/179 (34%), Positives = 83/179 (46%), Gaps = 1/179 (0%)
Frame = +3
Query: 111 DDEANKAKQAEIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXX 290
DD A KA++ E+ K+AEVRKRMEEA+ GF+TP
Sbjct: 19 DDAARKAQEREL--KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQ 76
Query: 291 XXXXXXXXXXXXXXXCGKPKNIDDANE-AELQTICQMYWHRIYNLEGDKYELERAIEIRK 467
++D N+ +L I + + R+ LE +K+++ + +
Sbjct: 77 QMLKEQERQKTLQQRTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTE 136
Query: 468 MEISDLNSQVNDLRGKFVKPTLKKVSKYXXXXXXXXXXXXXXXXRNQLKVVKXKEFTLE 644
EI+ L QVNDLRGKFVKPTLKKVSKY RN LKVVK KE L+
Sbjct: 137 AEINQLTIQVNDLRGKFVKPTLKKVSKYDNKFKSSGEVKEKSNFRNNLKVVK-KETDLD 194
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 88.6 bits (210), Expect = 3e-18
Identities = 62/179 (34%), Positives = 83/179 (46%), Gaps = 1/179 (0%)
Frame = +3
Query: 111 DDEANKAKQAEIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXX 290
DD A KA++ E+ K+AEVRKRMEEA+ GF+TP
Sbjct: 19 DDAARKAQEREL--KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQ 76
Query: 291 XXXXXXXXXXXXXXXCGKPKNIDDANE-AELQTICQMYWHRIYNLEGDKYELERAIEIRK 467
++D N+ +L I + + R+ LE +K+++ + +
Sbjct: 77 QMLKEQERQKTLQQRTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTE 136
Query: 468 MEISDLNSQVNDLRGKFVKPTLKKVSKYXXXXXXXXXXXXXXXXRNQLKVVKXKEFTLE 644
EI+ L QVNDLRGKFVKPTLKKVSKY RN LKVVK KE L+
Sbjct: 137 AEINQLTIQVNDLRGKFVKPTLKKVSKYDNKFKSSGEVKEKSNFRNNLKVVK-KETDLD 194
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 84.2 bits (199), Expect = 7e-17
Identities = 60/182 (32%), Positives = 83/182 (45%), Gaps = 2/182 (1%)
Frame = +3
Query: 105 MADDEANKA-KQAEIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXX 281
M+D +A++A K AE +RK+ EVRKR+EEAS GF+TP
Sbjct: 1 MSDVDADEARKMAERERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDL 60
Query: 282 XXXXXXXXXXXXXXXXXXCGKPKNIDDANEAELQTICQMYWHRIYNLEGDKYELERAIEI 461
++D NE +L+ + R+ +LE + Y++ +
Sbjct: 61 KQQQMLKEQERQRILQERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQ 118
Query: 462 RKMEISDLNSQVNDLRGKFVKPTLKKVSK-YXXXXXXXXXXXXXXXXRNQLKVVKXKEFT 638
+ EI++L VNDLRGKFVKPTLKKVSK R QLKVV EF
Sbjct: 119 KDFEINELTIAVNDLRGKFVKPTLKKVSKTEGKFDKLKKKEATKVDFRAQLKVVDKNEFA 178
Query: 639 LE 644
L+
Sbjct: 179 LD 180
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 84.2 bits (199), Expect = 7e-17
Identities = 60/182 (32%), Positives = 83/182 (45%), Gaps = 2/182 (1%)
Frame = +3
Query: 105 MADDEANKA-KQAEIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXX 281
M+D +A++A K AE +RK+ EVRKR+EEAS GF+TP
Sbjct: 1 MSDVDADEARKMAERERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDL 60
Query: 282 XXXXXXXXXXXXXXXXXXCGKPKNIDDANEAELQTICQMYWHRIYNLEGDKYELERAIEI 461
++D NE +L+ + R+ +LE + Y++ +
Sbjct: 61 KQQQMLKEQERQRILQERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQ 118
Query: 462 RKMEISDLNSQVNDLRGKFVKPTLKKVSK-YXXXXXXXXXXXXXXXXRNQLKVVKXKEFT 638
+ EI++L VNDLRGKFVKPTLKKVSK R QLKVV EF
Sbjct: 119 KDFEINELTIAVNDLRGKFVKPTLKKVSKTEGKFDKLKKKEATKVDFRAQLKVVDKNEFA 178
Query: 639 LE 644
L+
Sbjct: 179 LD 180
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 81.4 bits (192), Expect = 5e-16
Identities = 50/149 (33%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Frame = +3
Query: 108 ADDEANKAKQAEIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXX 287
A ++A + K AE + K+AEVRKR+EEA GF+TP
Sbjct: 5 AGEDAQR-KAAEREAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKR 63
Query: 288 XXXXXXXXXXXXXXXXCGKPKNIDDANE-AELQTICQMYWHRIYNLEGDKYELERAIEIR 464
N+D ++ +L+ I W R+ LE +KY++ +
Sbjct: 64 QQLLKEQERQKALADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQT 123
Query: 465 KMEISDLNSQVNDLRGKFVKPTLKKVSKY 551
+ EI+ L +VNDLRGKFVKP+LKKVSKY
Sbjct: 124 EAEINSLTIEVNDLRGKFVKPSLKKVSKY 152
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 81.4 bits (192), Expect = 5e-16
Identities = 50/149 (33%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Frame = +3
Query: 108 ADDEANKAKQAEIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXX 287
A ++A + K AE + K+AEVRKR+EEA GF+TP
Sbjct: 5 AGEDAQR-KAAEREAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKR 63
Query: 288 XXXXXXXXXXXXXXXXCGKPKNIDDANE-AELQTICQMYWHRIYNLEGDKYELERAIEIR 464
N+D ++ +L+ I W R+ LE +KY++ +
Sbjct: 64 QQLLKEQERQKALADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQT 123
Query: 465 KMEISDLNSQVNDLRGKFVKPTLKKVSKY 551
+ EI+ L +VNDLRGKFVKP+LKKVSKY
Sbjct: 124 EAEINSLTIEVNDLRGKFVKPSLKKVSKY 152
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 75.8 bits (178), Expect = 2e-14
Identities = 50/148 (33%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Frame = +3
Query: 111 DDEANKAKQAEIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXX 290
D E + K E + K+AEVRKR+EEA GF+TP
Sbjct: 18 DGEDAQRKAQEREAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQ 76
Query: 291 XXXXXXXXXXXXXXXCGKPKNIDDANE-AELQTICQMYWHRIYNLEGDKYELERAIEIRK 467
N+D ++ A+L+ I + R+ NLE +KY++ +
Sbjct: 77 QLRKEQERVKVLAERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETE 136
Query: 468 MEISDLNSQVNDLRGKFVKPTLKKVSKY 551
I+ LN +VNDLRGKFVKP+LKKVSKY
Sbjct: 137 TTINQLNIEVNDLRGKFVKPSLKKVSKY 164
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 75.8 bits (178), Expect = 2e-14
Identities = 50/148 (33%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Frame = +3
Query: 111 DDEANKAKQAEIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXX 290
D E + K E + K+AEVRKR+EEA GF+TP
Sbjct: 18 DGEDAQRKAQEREAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQ 76
Query: 291 XXXXXXXXXXXXXXXCGKPKNIDDANE-AELQTICQMYWHRIYNLEGDKYELERAIEIRK 467
N+D ++ A+L+ I + R+ NLE +KY++ +
Sbjct: 77 QLRKEQERVKVLAERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETE 136
Query: 468 MEISDLNSQVNDLRGKFVKPTLKKVSKY 551
I+ LN +VNDLRGKFVKP+LKKVSKY
Sbjct: 137 TTINQLNIEVNDLRGKFVKPSLKKVSKY 164
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 408 RIYNLEGDKYELERAIEIRKMEISDLNSQVNDL-RGKFVKPTL 533
RI LEG+KY+LE+ E ++ ++ +LN + + R K +K L
Sbjct: 147 RIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKALKKGL 189
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 408 RIYNLEGDKYELERAIEIRKMEISDLNSQVNDL-RGKFVKPTL 533
RI LEG+KY+LE+ E ++ ++ +LN + + R K +K L
Sbjct: 251 RIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKALKKGL 293
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 30.7 bits (66), Expect = 0.92
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +3
Query: 351 NIDDANEAELQTICQMYWHRIYNLEGDKYELERAIEIRKMEISDLNSQ 494
N + ++EL+ + RI LE +KY+LE+ E ++ ++ +LN +
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDMKELNER 1090
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 426 GDKYELERAI-EIRKMEISDLNSQVNDLRGKFVKPTLKKVSKY 551
G + ER++ E + EIS+ +S +NDL+ K + + KK +KY
Sbjct: 426 GSLLDKERSLLEEKNKEISERDSSINDLKEKLAE-SEKKATKY 467
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 426 GDKYELERAI-EIRKMEISDLNSQVNDLRGKFVKPTLKKVSKY 551
G + ER++ E + EIS+ +S +NDL+ K + + KK +KY
Sbjct: 428 GSLLDKERSLLEEKNKEISERDSSINDLKEKLAE-SEKKATKY 469
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +3
Query: 357 DDA---NEAELQTICQMYWHRIYN-LEGDKYELERAIEIRKMEISDLNSQVNDLRGKFVK 524
DDA N+A L+ + W Y L+ + E+ R + ++ E +DL + ++DLRG F K
Sbjct: 686 DDAARKNDALLEDVAT--WQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDK 743
Query: 525 PT 530
T
Sbjct: 744 LT 745
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +3
Query: 357 DDA---NEAELQTICQMYWHRIYN-LEGDKYELERAIEIRKMEISDLNSQVNDLRGKFVK 524
DDA N+A L+ + W Y L+ + E+ R + ++ E +DL + ++DLRG F K
Sbjct: 686 DDAARKNDALLEDVAT--WQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDK 743
Query: 525 PT 530
T
Sbjct: 744 LT 745
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +3
Query: 357 DDA---NEAELQTICQMYWHRIYN-LEGDKYELERAIEIRKMEISDLNSQVNDLRGKFVK 524
DDA N+A L+ + W Y L+ + E+ R + ++ E +DL + ++DLRG F K
Sbjct: 446 DDAARKNDALLEDVAT--WQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDK 503
Query: 525 PT 530
T
Sbjct: 504 LT 505
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +3
Query: 357 DDA---NEAELQTICQMYWHRIYN-LEGDKYELERAIEIRKMEISDLNSQVNDLRGKFVK 524
DDA N+A L+ + W Y L+ + E+ R + ++ E +DL + ++DLRG F K
Sbjct: 686 DDAARKNDALLEDVAT--WQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDK 743
Query: 525 PT 530
T
Sbjct: 744 LT 745
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 426 GDKYELERAI-EIRKMEISDLNSQVNDLRGKFVKPTLKKVSKY 551
G + ER++ E + EIS+ +S +NDL+ K + + KK +KY
Sbjct: 428 GSLLDKERSLLEEKNKEISERDSSINDLKEKLAE-SEKKATKY 469
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,470,128
Number of Sequences: 27780
Number of extensions: 160914
Number of successful extensions: 628
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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