Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_H03
(570 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16W64 Cluster: Fragile X mental retardation syndrome-r... 205 5e-52
UniRef50_Q5PQZ6 Cluster: FMR1 protein; n=10; Eutheria|Rep: FMR1 ... 182 7e-45
UniRef50_Q06787 Cluster: Fragile X mental retardation 1 protein;... 182 7e-45
UniRef50_P51114 Cluster: Fragile X mental retardation syndrome-r... 179 5e-44
UniRef50_Q4T723 Cluster: Chromosome undetermined SCAF8356, whole... 177 1e-43
UniRef50_P51116 Cluster: Fragile X mental retardation syndrome-r... 163 3e-39
UniRef50_A7RUN8 Cluster: Predicted protein; n=2; Nematostella ve... 151 8e-36
UniRef50_Q9NFU0 Cluster: Fragile X mental retardation syndrome-r... 144 2e-33
UniRef50_UPI0001555862 Cluster: PREDICTED: similar to Fragile X ... 141 9e-33
UniRef50_Q0V9Q1 Cluster: Putative uncharacterized protein; n=1; ... 114 1e-24
UniRef50_Q683N2 Cluster: HyFMR1 protein; n=1; Hydractinia echina... 85 1e-15
UniRef50_Q925S6 Cluster: Modified fragile X mental retardation p... 59 6e-08
UniRef50_UPI000065F35C Cluster: Homolog of Homo sapiens "FXR1 pr... 46 5e-04
UniRef50_UPI0000660CCF Cluster: Homolog of Homo sapiens "FXR1 pr... 43 0.004
UniRef50_Q4SS71 Cluster: Chromosome 11 SCAF14479, whole genome s... 35 1.5
UniRef50_Q4SJU3 Cluster: Chromosome 1 SCAF14573, whole genome sh... 34 2.7
UniRef50_Q8IUI9 Cluster: FMR1; n=3; Euarchontoglires|Rep: FMR1 -... 34 2.7
UniRef50_UPI000069EDB9 Cluster: PREDICTED: similar to tudor doma... 33 6.2
UniRef50_Q8RIY7 Cluster: RloD; n=2; Campylobacter jejuni|Rep: Rl... 32 8.2
>UniRef50_Q16W64 Cluster: Fragile X mental retardation
syndrome-related protein 1, putative; n=5;
Endopterygota|Rep: Fragile X mental retardation
syndrome-related protein 1, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 717
Score = 205 bits (501), Expect = 5e-52
Identities = 94/156 (60%), Positives = 119/156 (76%)
Frame = +2
Query: 89 IVTDVLDNEVLVAFENDWQPESKFPFSQVFLPPKDTGKHTEFTENQEVEVFARSNEKEAC 268
+VTDV ++ VLVAFENDWQ ESKF FSQV LPP +T T F E+ EVEV++RSN+ EAC
Sbjct: 14 VVTDVFEDGVLVAFENDWQEESKFLFSQVRLPPTETP--TTFCEHMEVEVYSRSNDNEAC 71
Query: 269 GWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLPKTPIDKNTFHKFEITVPDEL 448
GWW A IKMM+G+F V+EYL WDN YTEIV DRLR K PI++ TF +FEI VP+++
Sbjct: 72 GWWRAVIKMMKGEFFVVEYLGWDNSYTEIVSADRLRAKNTNPPINEKTFFRFEIEVPEDI 131
Query: 449 KDYAKVENAHKEFXKAIGAALVWYVPERAVLAVLSR 556
++YAK++ H+EF KAIGAA Y+P+R L V+SR
Sbjct: 132 REYAKIDGVHREFQKAIGAAECRYLPDRGTLLVISR 167
>UniRef50_Q5PQZ6 Cluster: FMR1 protein; n=10; Eutheria|Rep: FMR1
protein - Homo sapiens (Human)
Length = 586
Score = 182 bits (442), Expect = 7e-45
Identities = 85/173 (49%), Positives = 114/173 (65%)
Frame = +2
Query: 35 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPESKFPFSQVFLPPKDTGKHTEF 214
ME+L VEV G NGA+YKA V DV ++ + VAFEN+WQP+ + PF V PP G + +
Sbjct: 1 MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPDRQIPFHDVRFPPP-VGYNKDI 59
Query: 215 TENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLPKT 394
E+ EVEV++R+NEKE C WW A ++M++G+F VIEY D Y EIV +RLR P
Sbjct: 60 NESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNK 119
Query: 395 PIDKNTFHKFEITVPDELKDYAKVENAHKEFXKAIGAALVWYVPERAVLAVLS 553
P K+TFHK ++ VP++L+ E AHK+F KA+GA V Y PE L +LS
Sbjct: 120 PATKDTFHKIKLDVPEDLRQMCAKEAAHKDFKKAVGAFSVTYDPENYQLVILS 172
>UniRef50_Q06787 Cluster: Fragile X mental retardation 1 protein;
n=60; Euteleostomi|Rep: Fragile X mental retardation 1
protein - Homo sapiens (Human)
Length = 632
Score = 182 bits (442), Expect = 7e-45
Identities = 85/173 (49%), Positives = 114/173 (65%)
Frame = +2
Query: 35 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPESKFPFSQVFLPPKDTGKHTEF 214
ME+L VEV G NGA+YKA V DV ++ + VAFEN+WQP+ + PF V PP G + +
Sbjct: 1 MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPDRQIPFHDVRFPPP-VGYNKDI 59
Query: 215 TENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLPKT 394
E+ EVEV++R+NEKE C WW A ++M++G+F VIEY D Y EIV +RLR P
Sbjct: 60 NESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNK 119
Query: 395 PIDKNTFHKFEITVPDELKDYAKVENAHKEFXKAIGAALVWYVPERAVLAVLS 553
P K+TFHK ++ VP++L+ E AHK+F KA+GA V Y PE L +LS
Sbjct: 120 PATKDTFHKIKLDVPEDLRQMCAKEAAHKDFKKAVGAFSVTYDPENYQLVILS 172
>UniRef50_P51114 Cluster: Fragile X mental retardation
syndrome-related protein 1; n=34; Mammalia|Rep: Fragile
X mental retardation syndrome-related protein 1 - Homo
sapiens (Human)
Length = 621
Score = 179 bits (435), Expect = 5e-44
Identities = 82/173 (47%), Positives = 115/173 (66%)
Frame = +2
Query: 35 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPESKFPFSQVFLPPKDTGKHTEF 214
M D++VEV G NGA+YK + DV ++ + V FEN+WQPE + PF++V LPP K E
Sbjct: 1 MADVTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKK-EI 59
Query: 215 TENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLPKT 394
+E EVEV++R+N++E CGWW A ++MM+G+F VIEY D Y EIV +RLR
Sbjct: 60 SEGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNK 119
Query: 395 PIDKNTFHKFEITVPDELKDYAKVENAHKEFXKAIGAALVWYVPERAVLAVLS 553
+ KNTF K + VP++L++ ENAHK+F KA+GA ++Y PE L +LS
Sbjct: 120 TVKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILS 172
>UniRef50_Q4T723 Cluster: Chromosome undetermined SCAF8356, whole
genome shotgun sequence; n=5; Tetraodontidae|Rep:
Chromosome undetermined SCAF8356, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 660
Score = 177 bits (431), Expect = 1e-43
Identities = 84/173 (48%), Positives = 113/173 (65%)
Frame = +2
Query: 35 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPESKFPFSQVFLPPKDTGKHTEF 214
ME+L+VEV G GAYYK V D+ ++ V VAFEN WQ + + PFS V LPP K +
Sbjct: 1 MEELAVEVRGSYGAYYKGFVKDIHNDSVTVAFENKWQQDRQVPFSDVRLPPPSDEKK-DI 59
Query: 215 TENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLPKT 394
E EVE+F+RSN++E GWW ++MM+GDF VIEY W+ Y EIV +RLR P
Sbjct: 60 GEGDEVEIFSRSNDQEPYGWWMGKVRMMKGDFYVIEYAAWNASYNEIVTFERLRPVNPNK 119
Query: 395 PIDKNTFHKFEITVPDELKDYAKVENAHKEFXKAIGAALVWYVPERAVLAVLS 553
PI K++F K + VP +L++ + ENAHK+F KA+GA V Y PE + L ++S
Sbjct: 120 PITKDSFFKCTVPVPQDLQEACQNENAHKDFKKAVGAIHVSYSPESSELVIVS 172
>UniRef50_P51116 Cluster: Fragile X mental retardation
syndrome-related protein 2; n=75; Deuterostomia|Rep:
Fragile X mental retardation syndrome-related protein 2
- Homo sapiens (Human)
Length = 673
Score = 163 bits (395), Expect = 3e-39
Identities = 79/170 (46%), Positives = 105/170 (61%)
Frame = +2
Query: 44 LSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPESKFPFSQVFLPPKDTGKHTEFTEN 223
L VEV G NGA+YK V DV ++ V + FEN+WQ E + PF V LPP + E TE
Sbjct: 14 LPVEVRGSNGAFYKGFVKDVHEDSVTIFFENNWQSERQIPFGDVRLPPP-ADYNKEITEG 72
Query: 224 QEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLPKTPID 403
EVEV++R+NE+E CGWW A ++MM+GDF VIEY D Y EIV +RLR P
Sbjct: 73 DEVEVYSRANEQEPCGWWLARVRMMKGDFYVIEYAACDATYNEIVTLERLRPVNPNPLAT 132
Query: 404 KNTFHKFEITVPDELKDYAKVENAHKEFXKAIGAALVWYVPERAVLAVLS 553
K +F K + VP++L++ EN HKEF KA+GA ++ + L +LS
Sbjct: 133 KGSFFKVTMAVPEDLREACSNENVHKEFKKALGANCIFLNITNSELFILS 182
>UniRef50_A7RUN8 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 657
Score = 151 bits (367), Expect = 8e-36
Identities = 73/174 (41%), Positives = 106/174 (60%)
Frame = +2
Query: 35 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPESKFPFSQVFLPPKDTGKHTEF 214
ME+L+VEV G+NGA+YKA V ++ ++V VAF ND + P+ + LPP + + E
Sbjct: 1 MEELAVEVCGKNGAFYKAYVRNIHQDQVSVAFLNDLNNPKRVPYEECRLPPSNA-QRKEI 59
Query: 215 TENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLPKT 394
+ E+EV+ R+++ E CGWW A I +G+F VI+Y WD + EIVP++R+R
Sbjct: 60 YVDDEIEVYTRADDNEPCGWWLAKIIHKKGEFFVIQYSGWDATFNEIVPRERIRPPNTNG 119
Query: 395 PIDKNTFHKFEITVPDELKDYAKVENAHKEFXKAIGAALVWYVPERAVLAVLSR 556
I + ++K I VP +LK+ K EN H+EF K + AA V Y VL VLSR
Sbjct: 120 SISRQMYYKVMIDVPPDLKNICKDENTHREFKKQVNAACVGYNENLNVLVVLSR 173
>UniRef50_Q9NFU0 Cluster: Fragile X mental retardation
syndrome-related protein 1; n=5; Drosophila
melanogaster|Rep: Fragile X mental retardation
syndrome-related protein 1 - Drosophila melanogaster
(Fruit fly)
Length = 684
Score = 144 bits (348), Expect = 2e-33
Identities = 76/177 (42%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Frame = +2
Query: 35 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 211
MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T +
Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58
Query: 212 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKL 385
F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RLR K
Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118
Query: 386 PKTPIDKNTFHKFEITVPDELKDYAKVENAHKEFXKAIGAALVWYVPERAVLAVLSR 556
PI TF++F + VP+EL++ A+ + HKEF + I A + Y + L V+S+
Sbjct: 119 SNPPITAKTFYQFTLPVPEELREEAQKDGIHKEFQRTIDAGVCNYSRDLDALIVISK 175
>UniRef50_UPI0001555862 Cluster: PREDICTED: similar to Fragile X
mental retardation, autosomal homolog 2, partial; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
Fragile X mental retardation, autosomal homolog 2,
partial - Ornithorhynchus anatinus
Length = 753
Score = 141 bits (342), Expect = 9e-33
Identities = 69/154 (44%), Positives = 94/154 (61%)
Frame = +2
Query: 92 VTDVLDNEVLVAFENDWQPESKFPFSQVFLPPKDTGKHTEFTENQEVEVFARSNEKEACG 271
V DV ++ V + FEN+WQ E + PF V LPP + E TE EVEV++R+NE+E CG
Sbjct: 236 VKDVHEDSVTIFFENNWQSERQIPFGDVRLPPP-ADYNKEITEGDEVEVYSRANEQEPCG 294
Query: 272 WWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLPKTPIDKNTFHKFEITVPDELK 451
WW A ++MM+GDF VIEY D Y EIV +RLR P K +F K + VP++L+
Sbjct: 295 WWLARVRMMKGDFYVIEYAACDATYNEIVTLERLRPVNPSPLATKGSFFKVTMAVPEDLR 354
Query: 452 DYAKVENAHKEFXKAIGAALVWYVPERAVLAVLS 553
E+AHKEF KA+GA ++ + L +LS
Sbjct: 355 QACSNESAHKEFKKAVGANCIFLNITNSELFILS 388
>UniRef50_Q0V9Q1 Cluster: Putative uncharacterized protein; n=1;
Xenopus tropicalis|Rep: Putative uncharacterized protein
- Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 437
Score = 114 bits (275), Expect = 1e-24
Identities = 65/183 (35%), Positives = 97/183 (53%), Gaps = 1/183 (0%)
Frame = +2
Query: 8 PM-KIRFQTKMEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPESKFPFSQVFLP 184
PM K + Q+ ++L VEV G NGA+Y+ V D+ + + VA N WQ E + PF V P
Sbjct: 19 PMTKAKPQSNTDELEVEVRGTNGAFYQGFVRDIHKDAITVAVGNTWQAEKRIPFQDVRFP 78
Query: 185 PKDTGKHTEFTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPK 364
P + + + EVEV+ R NEKE WW A + + +V+ + + N YT+ V
Sbjct: 79 PPPS-YNRNISVGNEVEVYTRVNEKEPRCWWLAKVLKRMKENIVVAFTAYGNRYTKNVTI 137
Query: 365 DRLRVKLPKTPIDKNTFHKFEITVPDELKDYAKVENAHKEFXKAIGAALVWYVPERAVLA 544
+LR+ P P+ KN F K + VP +L+ E ++F KAIGA V Y + +
Sbjct: 138 KQLRLVNPNKPLGKNDFCKVTLDVPTDLQHVFAEEFLLEDFKKAIGAFSVRYDWVSSQII 197
Query: 545 VLS 553
+LS
Sbjct: 198 ILS 200
>UniRef50_Q683N2 Cluster: HyFMR1 protein; n=1; Hydractinia
echinata|Rep: HyFMR1 protein - Hydractinia echinata
(Snail fur) (Hermit crab hydroid)
Length = 621
Score = 84.6 bits (200), Expect = 1e-15
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
Frame = +2
Query: 35 MEDLSVEVYG-ENGAYYKAIVTDVLDNEVLVAFENDWQPESKFPFSQVFLPPKDTGKHTE 211
ME++ VEV +NGA++ A + ++ E V F + + P S++ P + +
Sbjct: 1 MEEIQVEVRNRQNGAFFPAEIKNIHSEEATVEFYHSPNKWIRVPLSEIRKPLPLSQEALT 60
Query: 212 FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLRVKLPK 391
F + ++E++ + GWW + RG F V+ + D+ + EIVP +R+R
Sbjct: 61 FNDGDDIEIYQKKTMTNPMGWWKGKVVSRRGGFFVVRFNGLDDAFNEIVPLERIRPLGQW 120
Query: 392 TPIDKNTFHKFEITVPDELKDYAKVENAHKEFXKAIGAALVWYVPERAVLAVLS 553
P+ + + K I VP +L+ + H F + A+ V+Y + VL +LS
Sbjct: 121 QPVSRGMYFKCMIDVPQDLRTICGTD-VHGTFCQQTQASSVFYHGDLNVLVILS 173
>UniRef50_Q925S6 Cluster: Modified fragile X mental retardation
protein; n=4; Amniota|Rep: Modified fragile X mental
retardation protein - Mus musculus (Mouse)
Length = 149
Score = 59.3 bits (137), Expect = 6e-08
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = +2
Query: 155 KFPFSQVFLPPKDTGKHTEFTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIE 322
+ PF V PP G + + E+ EVEV++R+NEKE C WW A ++M++G+ ++I+
Sbjct: 1 QIPFHDVRFPPP-VGYNKDINESDEVEVYSRANEKEPCCWWLAKVRMIKGEIILID 55
>UniRef50_UPI000065F35C Cluster: Homolog of Homo sapiens "FXR1
protein; n=1; Takifugu rubripes|Rep: Homolog of Homo
sapiens "FXR1 protein - Takifugu rubripes
Length = 78
Score = 46.4 bits (105), Expect = 5e-04
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 50 VEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPESKFPFSQV-FLPPKDTGKHTEFTENQ 226
VEV G NGA+Y+A + + + V +EN+ Q E V LPP +
Sbjct: 1 VEVKGLNGAFYEAQIKSISGKLLAVVYENNPQEEVVVCCDSVRRLPPPNFS--CNVAVGD 58
Query: 227 EVEVFARSNEKEACGWWTA 283
EVEVF+R + +E GWW A
Sbjct: 59 EVEVFSRLSVQEPFGWWQA 77
>UniRef50_UPI0000660CCF Cluster: Homolog of Homo sapiens "FXR1
protein; n=2; Takifugu rubripes|Rep: Homolog of Homo
sapiens "FXR1 protein - Takifugu rubripes
Length = 238
Score = 43.2 bits (97), Expect = 0.004
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +2
Query: 227 EVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLE 331
EVEVF+R ++E+ GWW A IKM+ G+ +IE ++
Sbjct: 103 EVEVFSRLGDQESFGWWLAQIKMIIGELYLIECMD 137
>UniRef50_Q4SS71 Cluster: Chromosome 11 SCAF14479, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 11
SCAF14479, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 273
Score = 34.7 bits (76), Expect = 1.5
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = -1
Query: 240 NTSTSWFSVNSVCLPVSLGGKKT*ENGNFDSGCQSFSKATRTSLSSTSVT 91
++ +S S SVC P LG +K + + DS SF+ A RTS S T+ T
Sbjct: 211 SSPSSPVSSPSVCPPYRLGKRKRITSESVDSALSSFASAQRTSSSYTAAT 260
>UniRef50_Q4SJU3 Cluster: Chromosome 1 SCAF14573, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 1 SCAF14573, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 86
Score = 33.9 bits (74), Expect = 2.7
Identities = 24/83 (28%), Positives = 35/83 (42%)
Frame = +2
Query: 35 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPESKFPFSQVFLPPKDTGKHTEF 214
M+ VEV G NGA+Y+A V + N + + + PP +
Sbjct: 1 MDKRCVEVRGLNGAFYEARVKFISGNMLTIIIIIII---IIIIIIIIMRPPPPPRLSCQV 57
Query: 215 TENQEVEVFARSNEKEACGWWTA 283
T VE + R+N +E GWW A
Sbjct: 58 TVGDVVETYCRNNCREPFGWWLA 80
>UniRef50_Q8IUI9 Cluster: FMR1; n=3; Euarchontoglires|Rep: FMR1 -
Homo sapiens (Human)
Length = 65
Score = 33.9 bits (74), Expect = 2.7
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 8 PMKIRFQTKMEDLSVEVYGENGAYYKAI 91
P R + KME+L VEV G NGA+YK +
Sbjct: 38 PGASRAEEKMEELVVEVRGSNGAFYKVL 65
>UniRef50_UPI000069EDB9 Cluster: PREDICTED: similar to tudor domain
containing 6 protein; n=2; Xenopus tropicalis|Rep:
PREDICTED: similar to tudor domain containing 6 protein
- Xenopus tropicalis
Length = 1777
Score = 32.7 bits (71), Expect = 6.2
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 41 DLSVEVYGENGAYYKAIVTDVLDNEVLVAF 130
DL +Y ++ YY+AIVTD+LD +V V F
Sbjct: 530 DLCCALYYKDRHYYRAIVTDILDLKVAVYF 559
>UniRef50_Q8RIY7 Cluster: RloD; n=2; Campylobacter jejuni|Rep: RloD
- Campylobacter jejuni
Length = 1014
Score = 32.3 bits (70), Expect = 8.2
Identities = 18/74 (24%), Positives = 38/74 (51%)
Frame = +2
Query: 20 RFQTKMEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPESKFPFSQVFLPPKDTG 199
+F T+ ++S+ Y+ I+ +++ N+ L F D+Q K+ + ++ L ++
Sbjct: 221 KFFTRKYNISILKNKNYIKNYQDILENIIKNDNLQYFGFDYQKYIKYNYCEILLSFEEND 280
Query: 200 KHTEFTENQEVEVF 241
K EF N + E+F
Sbjct: 281 KFIEFYMNNKDELF 294
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,647,466
Number of Sequences: 1657284
Number of extensions: 11004286
Number of successful extensions: 28508
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 27614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28481
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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