Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_H03
         (570 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   1.4  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   5.6  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   7.4  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   9.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   9.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   9.8  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 368 RLRVKLPKTPIDKNTFHKFEITVPDELKDY 457
           +LR ++ K   D ++ HK  +T+ + L DY
Sbjct: 89  KLRREVEKAKRDLSSVHKTTLTIENLLADY 118


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 155 LILAASHFQRLLEPRCRARR*QWPYNKHH 69
           L LAASH Q+    + R     +PY   H
Sbjct: 49  LSLAASHLQQQQLKKQRLDNGDYPYENGH 77


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 308 FLVIEYLEWDNCYTEI 355
           F +I+Y  W  C+ E+
Sbjct: 231 FTLIDYSLWKACFVEV 246


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/31 (22%), Positives = 15/31 (48%)
 Frame = +2

Query: 329 EWDNCYTEIVPKDRLRVKLPKTPIDKNTFHK 421
           ++D C   I P+++  +      +D+N   K
Sbjct: 88  QYDTCQQGIYPENKTLINETSLQLDENKLDK 118


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/31 (22%), Positives = 15/31 (48%)
 Frame = +2

Query: 329 EWDNCYTEIVPKDRLRVKLPKTPIDKNTFHK 421
           ++D C   I P+++  +      +D+N   K
Sbjct: 88  QYDTCQQGIYPENKTLINETSLQLDENKLDK 118


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 176 FLPPKDTGKHTE 211
           + PPK TGK+ E
Sbjct: 442 YCPPKHTGKNCE 453


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/31 (22%), Positives = 15/31 (48%)
 Frame = +2

Query: 329 EWDNCYTEIVPKDRLRVKLPKTPIDKNTFHK 421
           ++D C   I P+++  +      +D+N   K
Sbjct: 88  QYDTCQQGIYPENKTLINETSLQLDENKLDK 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,014
Number of Sequences: 336
Number of extensions: 2886
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)