Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_H01
(716 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 301 4e-82
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 301 4e-82
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 300 5e-82
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 300 5e-82
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 300 5e-82
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 297 4e-81
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 297 4e-81
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 297 4e-81
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 295 3e-80
Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical pr... 30 1.9
U22832-1|AAA64507.1| 293|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 301 bits (738), Expect = 4e-82
Identities = 151/218 (69%), Positives = 171/218 (78%), Gaps = 7/218 (3%)
Frame = +3
Query: 84 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 260
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 261 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 425
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 426 VIISAPSADAPMFVVGVNLXAYDPS-FKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXX 602
VIISAPSADAPM+VVGVN YD S VISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 603 XXXXXXXXXXXDGPSGKLWRDGRGAQQNIXPASTGAAK 716
DGPSGKLWRDGRGA QNI PASTGAAK
Sbjct: 184 VHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAK 221
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 301 bits (738), Expect = 4e-82
Identities = 151/218 (69%), Positives = 171/218 (78%), Gaps = 7/218 (3%)
Frame = +3
Query: 84 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 260
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 261 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 425
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 426 VIISAPSADAPMFVVGVNLXAYDPS-FKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXX 602
VIISAPSADAPM+VVGVN YD S VISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 603 XXXXXXXXXXXDGPSGKLWRDGRGAQQNIXPASTGAAK 716
DGPSGKLWRDGRGA QNI PASTGAAK
Sbjct: 184 VHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAK 221
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 300 bits (737), Expect = 5e-82
Identities = 150/218 (68%), Positives = 171/218 (78%), Gaps = 7/218 (3%)
Frame = +3
Query: 84 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 260
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 261 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 425
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 426 VIISAPSADAPMFVVGVNLXAYDPS-FKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXX 602
VIISAPSADAPM+VVGVN YD S V+SNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 603 XXXXXXXXXXXDGPSGKLWRDGRGAQQNIXPASTGAAK 716
DGPSGKLWRDGRGA QNI PASTGAAK
Sbjct: 184 VHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAK 221
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 300 bits (737), Expect = 5e-82
Identities = 150/218 (68%), Positives = 171/218 (78%), Gaps = 7/218 (3%)
Frame = +3
Query: 84 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 260
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 261 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 425
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 426 VIISAPSADAPMFVVGVNLXAYDPS-FKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXX 602
VIISAPSADAPM+VVGVN YD S V+SNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 603 XXXXXXXXXXXDGPSGKLWRDGRGAQQNIXPASTGAAK 716
DGPSGKLWRDGRGA QNI PASTGAAK
Sbjct: 184 VHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAK 221
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 300 bits (737), Expect = 5e-82
Identities = 150/218 (68%), Positives = 171/218 (78%), Gaps = 7/218 (3%)
Frame = +3
Query: 84 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 260
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 261 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 425
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 426 VIISAPSADAPMFVVGVNLXAYDPS-FKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXX 602
VIISAPSADAPM+VVGVN YD S V+SNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 603 XXXXXXXXXXXDGPSGKLWRDGRGAQQNIXPASTGAAK 716
DGPSGKLWRDGRGA QNI PASTGAAK
Sbjct: 184 VHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAK 221
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 297 bits (730), Expect = 4e-81
Identities = 148/216 (68%), Positives = 172/216 (79%), Gaps = 7/216 (3%)
Frame = +3
Query: 90 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 266
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 267 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 431
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 432 ISAPSADAPMFVVGVNLXAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXX 608
ISAPSADAPMFVVGVN YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
Query: 609 XXXXXXXXXDGPSGKLWRDGRGAQQNIXPASTGAAK 716
DGPSGKLWRDGRGA QNI PASTGAAK
Sbjct: 186 AVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAK 221
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 297 bits (730), Expect = 4e-81
Identities = 148/216 (68%), Positives = 172/216 (79%), Gaps = 7/216 (3%)
Frame = +3
Query: 90 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 266
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 267 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 431
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 432 ISAPSADAPMFVVGVNLXAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXX 608
ISAPSADAPMFVVGVN YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
Query: 609 XXXXXXXXXDGPSGKLWRDGRGAQQNIXPASTGAAK 716
DGPSGKLWRDGRGA QNI PASTGAAK
Sbjct: 186 AVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAK 221
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 297 bits (730), Expect = 4e-81
Identities = 148/216 (68%), Positives = 172/216 (79%), Gaps = 7/216 (3%)
Frame = +3
Query: 90 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 266
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 267 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 431
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 432 ISAPSADAPMFVVGVNLXAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXX 608
ISAPSADAPMFVVGVN YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
Query: 609 XXXXXXXXXDGPSGKLWRDGRGAQQNIXPASTGAAK 716
DGPSGKLWRDGRGA QNI PASTGAAK
Sbjct: 186 AVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAK 221
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 295 bits (723), Expect = 3e-80
Identities = 147/216 (68%), Positives = 171/216 (79%), Gaps = 7/216 (3%)
Frame = +3
Query: 90 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 266
+GINGFGRIGRLVLRA++EK + V A+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVDAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 267 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 431
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 432 ISAPSADAPMFVVGVNLXAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXX 608
ISAPSADAPMFVVGVN YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
Query: 609 XXXXXXXXXDGPSGKLWRDGRGAQQNIXPASTGAAK 716
DGPSGKLWRDGRGA QNI PASTGAAK
Sbjct: 186 AVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAK 221
>Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical
protein C38C6.2 protein.
Length = 647
Score = 29.9 bits (64), Expect = 1.9
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 95 NQWIWPHWPFGAP 133
N+ +WPHW FG+P
Sbjct: 426 NEQVWPHWRFGSP 438
>U22832-1|AAA64507.1| 293|Caenorhabditis elegans Hypothetical
protein C09F5.2 protein.
Length = 293
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 153 AQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDGFLVVNGN 287
A +V + F+ Y+++ + + GRFK V+ FL V N
Sbjct: 235 AMLVPVGVVFVVFSYLIHKNRVSHSLGRFKHKVDTMKQFLDVEAN 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,951,275
Number of Sequences: 27780
Number of extensions: 326801
Number of successful extensions: 859
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -