Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_G24
(635 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 8e-25
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 77 9e-15
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 77 2e-14
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 68 6e-12
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 62 5e-10
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 56 2e-08
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 56 2e-08
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 50 2e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 50 2e-06
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 49 4e-06
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 47 1e-05
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 47 1e-05
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 46 3e-05
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 44 1e-04
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 43 2e-04
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 36 0.028
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 36 0.036
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.064
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 34 0.084
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 32 0.34
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19) 30 1.4
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 30 1.4
SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 29 2.4
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 29 3.2
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07) 28 7.3
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 110 bits (265), Expect = 8e-25
Identities = 46/120 (38%), Positives = 74/120 (61%)
Frame = +2
Query: 275 PDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPD 454
P+ + +PFNKNFY+ HP + K+S E+++ R K + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 455 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVHINNQPPIR 634
+ ++ + Y +PT IQ Q PIA+SG+++ G+ +TGSGKT A++ P +VHI +QP ++
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQ 586
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 77.4 bits (182), Expect = 9e-15
Identities = 34/87 (39%), Positives = 53/87 (60%)
Frame = +2
Query: 371 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLX 550
+R ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + +++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 551 GVXQTGSGKTLAYILPXIVHINNQPPI 631
GV +TGSGKT A+ +P +V I P I
Sbjct: 143 GVAETGSGKTAAFAIPLLVWIMGLPKI 169
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/108 (34%), Positives = 60/108 (55%)
Frame = +2
Query: 305 FNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 484
F ++YD + V + S V+E R K+ + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 485 YKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVHINNQPP 628
++ PTPIQ Q MSG+++ G+ +TGSGKTLAY LP + + + P
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAP 139
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 68.1 bits (159), Expect = 6e-12
Identities = 31/88 (35%), Positives = 50/88 (56%)
Frame = +2
Query: 320 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 499
Y HPT+ + +V++ R+K E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 500 PIQAQGWPIAMSGKNLXGVXQTGSGKTL 583
PIQ Q P+ +SG+++ TGSGK L
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLL 248
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 65.3 bits (152), Expect = 4e-11
Identities = 34/85 (40%), Positives = 50/85 (58%)
Frame = +2
Query: 365 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 544
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++
Sbjct: 692 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 750
Query: 545 LXGVXQTGSGKTLAYILPXIVHINN 619
+ QTGSGKT A++LP + + N
Sbjct: 751 VMACAQTGSGKTAAFLLPVMTSMMN 775
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/76 (39%), Positives = 41/76 (53%)
Frame = +2
Query: 395 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSG 574
VSG I F E F + + + GY+ PTP+Q PI M+G++L QTGSG
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 575 KTLAYILPXIVHINNQ 622
KT AY+LP + + Q
Sbjct: 529 KTAAYMLPVLTSLIKQ 544
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +2
Query: 260 QNMRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFE 436
+ ++ D +V QPF K+FY P + K +P E +E+R E + V G P++ +
Sbjct: 49 EELQPVDHKTVVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWA 108
Query: 437 EANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQT 565
+ + +K Y++PTPIQAQ P+ MSG+++ + T
Sbjct: 109 QTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMT 151
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 61.7 bits (143), Expect = 5e-10
Identities = 32/84 (38%), Positives = 45/84 (53%)
Frame = +2
Query: 347 RSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 526
R +EV+ YR ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQFILP 116
Query: 527 AMSGKNLXGVXQTGSGKTLAYILP 598
+ N + Q G G + + P
Sbjct: 117 GIVHINHQPLLQPGDGPIVLVLCP 140
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/61 (39%), Positives = 38/61 (62%)
Frame = +2
Query: 422 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPX 601
++ F + G+ G+ PT IQ QG P+A+SG+++ G +TGSGKTLA+++P
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 602 I 604
I
Sbjct: 109 I 109
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +2
Query: 365 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 544
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++
Sbjct: 115 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 173
Query: 545 LXGVXQTGSGKT 580
+ QTGSGKT
Sbjct: 174 VMACAQTGSGKT 185
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 54.8 bits (126), Expect = 6e-08
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +2
Query: 422 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPX 601
I FE+ + + + V GYK+PTP+Q PI ++L QTGSGKT A+++P
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPI 933
Query: 602 IVHINNQPP 628
+ I + P
Sbjct: 934 LSRIYMEGP 942
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +2
Query: 464 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVHINNQP 625
+ V +G+ PTPIQA P+A+ GK++ TG+GKT A++LP + + +P
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP 76
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +2
Query: 359 EVEEYRNKHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 526
++ +R++ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 527 AMSGKNLXG 553
G G
Sbjct: 197 MAHGPKKSG 205
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 48.8 bits (111), Expect = 4e-06
Identities = 26/75 (34%), Positives = 38/75 (50%)
Frame = +2
Query: 386 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQT 565
EV + G P + F +Y + +G PT +Q WP + G+++ GV
Sbjct: 178 EVLIQGESAPRPFLTMNNSTFYEYGPR----LGVTVPTSLQKHMWPSLLRGRDVAGVAIE 233
Query: 566 GSGKTLAYILPXIVH 610
GSGK LAY+LP I+H
Sbjct: 234 GSGKRLAYLLP-IIH 247
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +2
Query: 464 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXI 604
QG+K MG+ T IQ + + G++L G +TGSGKTLA+++P +
Sbjct: 585 QGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVV 631
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +2
Query: 431 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXI 604
FE+ + G+ G+ +P+PIQ + P+A++G+++ + G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLL 106
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +2
Query: 431 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXI 604
FE+ + G+ G+ +P+PIQ + P+A++G+++ + G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLL 106
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Frame = +2
Query: 380 KHEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK--N 544
KHEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++ N
Sbjct: 85 KHEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVN 144
Query: 545 LXGVXQTGSGKTLAYILPXIVHINNQPP 628
+ Q+G+GKT A++L + ++ P
Sbjct: 145 MIAQSQSGTGKTAAFVLTMLSRVDATKP 172
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +2
Query: 449 PDYVQQGVKTMGYKEPTPIQAQGWPIAMS-GKNLXGVXQTGSGKTLAYILPXIVHI 613
PD + + + G+ +PTPIQ+ P A+ +++ G +TGSGKTLA+ +P I HI
Sbjct: 139 PD-ILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHI 193
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +2
Query: 479 MGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVHINNQP 625
MG K+PT IQ P + G++ G +TGSGKT A+ LP + + + P
Sbjct: 25 MGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDP 73
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +2
Query: 449 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXI 604
P V++ +K MG +P PIQ + P S K+L +TG+GK+L ++LP +
Sbjct: 169 PKLVEK-LKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV 219
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 35.9 bits (79), Expect = 0.028
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 452 DYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVH 610
D V + + + +PT IQ P + ++ QTGSGKTLAY+ P +VH
Sbjct: 387 DDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAP-LVH 438
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 35.5 bits (78), Expect = 0.036
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +2
Query: 464 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAY 589
+G+ G+++P+PIQ + P+ G +L ++G+GKT +
Sbjct: 26 RGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVF 67
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 34.7 bits (76), Expect = 0.064
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 521 PIAMSGKNLXGVXQTGSGKTLAYILP 598
P+ M GK++ + +TGSGKT A+++P
Sbjct: 313 PLVMDGKDVVAMARTGSGKTAAFLIP 338
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 34.3 bits (75), Expect = 0.084
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 500 PIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXI 604
PIQA + G+++ G +TG+GKTL++ LP +
Sbjct: 98 PIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLV 132
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 32.3 bits (70), Expect = 0.34
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Frame = +2
Query: 311 KNFYDPHPTVLKRSPYEVEEY-RNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGY 487
K D + LK E +E+ +N TV+ + P+ E P V + + +G+
Sbjct: 467 KELPDENDENLKEFAPEDDEFLKNLSLDTVAQMAAGIPV----ETETPPEVYKALGQLGF 522
Query: 488 KEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVHINNQP 625
Q Q +SG + V TG+GK+L Y LP ++ P
Sbjct: 523 SSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPAYMYHKRSP 568
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = +2
Query: 473 KTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVHINNQ 622
+T G+++P+ IQ + + G+++ Q+G+GKT + + + I+ Q
Sbjct: 13 ETEGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQ 62
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 407 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 520
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19)
Length = 304
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 482 GYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIV 607
GY + P+Q Q ++ K+ + TG+GKT+ Y +P ++
Sbjct: 136 GYIDFRPMQRQAIDTLLAEKDSLILLPTGAGKTICYAIPALL 177
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 353 PYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 484
P+E + + KH++ V+ VE + +Q +E F + ++Q VK G
Sbjct: 252 PFEPPKPKTKHKLDVATVEDYKKLQEYEREKFTEMIKQ-VKDTG 294
>SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 29.9 bits (64), Expect = 1.8
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 5/129 (3%)
Frame = -1
Query: 497 SVLCNPLSLHLVAHNQENLLLQSIE*DYEPQRHLQLPRVYFYTLRLHMVIF*E-----L* 333
++ C L ++ +N LLL + Y Q L +VY T H ++ L
Sbjct: 397 AIACCLLQVYHNTYNSHRLLLIAGVSQYLQQPSLAAMQVYHNTYNSHRLLLIAGVSQYLQ 456
Query: 332 DVDHKSFC*KVGVKQNPNLGVACSALQRILFSHQSLQILQIYCHRCQTETNYRRICCLLQ 153
++C + + L A + + H L YC RC T CCLLQ
Sbjct: 457 QPSLAAYCRCITI-----LTTAIACCYASVSQHLQQPSLAAYC-RCITILTTAIACCLLQ 510
Query: 152 IWNHRFHGY 126
++++ ++G+
Sbjct: 511 VYHNTYNGH 519
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 539 KNLXGVXQTGSGKTLAYILPXIVHINNQP 625
K++ G+ +TGSGKT A+ LP + + + P
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNP 30
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 365 EEYRNK-HEVTVSGVEVHNPIQYFEEANFPDY 457
EE NK H++ + + +HNP YFE+ + DY
Sbjct: 234 EEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
Length = 401
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 260 ALQRILFSHQSLQILQIYCHRCQTETNYRRICCLLQIWN-HRFHGYYSS 117
AL+RI + ++ C +YRR CC L +W H + Y+SS
Sbjct: 197 ALERIATPVTTSKLRCSTTQECCVRVDYRRKCC-LHVWRVHTTNTYWSS 244
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,012,017
Number of Sequences: 59808
Number of extensions: 365730
Number of successful extensions: 991
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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