BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_F_G24 (635 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 102 2e-22 Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 97 7e-21 U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 89 3e-18 AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 85 4e-17 AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 73 2e-13 AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 70 2e-12 AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 70 2e-12 AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 70 2e-12 AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 66 2e-11 AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 64 6e-11 U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 56 2e-08 L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 56 2e-08 AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 56 2e-08 AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 55 5e-08 AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 55 5e-08 AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 54 6e-08 U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 51 6e-07 U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 51 6e-07 AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 51 6e-07 AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 50 1e-06 AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 50 1e-06 AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 48 6e-06 AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 48 6e-06 Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 48 7e-06 U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 47 1e-05 Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 44 7e-05 AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 44 7e-05 AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 44 7e-05 AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 43 2e-04 AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 41 9e-04 AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 41 9e-04 Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 39 0.003 U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 39 0.003 AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 39 0.003 Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 38 0.008 Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 38 0.008 Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 38 0.008 AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 38 0.008 U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 37 0.011 AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 37 0.014 EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 36 0.018 CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 36 0.018 AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 36 0.024 Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 31 0.69 L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 30 1.2 U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 30 1.6 Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.1 AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 2.8 AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 2.8 Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.7 Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 3.7 Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 6.4 Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 6.4 Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 28 6.4 AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 28 6.4 >Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical protein F58E10.3a protein. Length = 561 Score = 102 bits (244), Expect = 2e-22 Identities = 46/119 (38%), Positives = 76/119 (63%) Frame = +2 Query: 266 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN 445 +R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136 Query: 446 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVHINNQ 622 P + + + +++PT IQ+ WPIAMSG+++ + +TGSGKTLA++LP +VHI Q Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQ 194 >Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical protein C46F11.4 protein. Length = 811 Score = 97.5 bits (232), Expect = 7e-21 Identities = 43/119 (36%), Positives = 70/119 (58%) Frame = +2 Query: 278 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 457 D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275 Query: 458 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVHINNQPPIR 634 + + ++ Y++PTPIQA P A+SG+++ G+ +TGSGKT AY+ P IVHI +QP ++ Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLK 334 >U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical protein F01F1.7 protein. Length = 730 Score = 88.6 bits (210), Expect = 3e-18 Identities = 39/85 (45%), Positives = 56/85 (65%) Frame = +2 Query: 371 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLX 550 +R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + +++ Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342 Query: 551 GVXQTGSGKTLAYILPXIVHINNQP 625 GV +TGSGKT A++LP +V I + P Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLP 367 >AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical protein F53H1.1 protein. Length = 970 Score = 85.0 bits (201), Expect = 4e-17 Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 1/123 (0%) Frame = +2 Query: 266 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEA 442 + + D V + F KNFY + + + EV+ YR + + +TV G++ PI+ + + Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309 Query: 443 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVHINNQ 622 + +K Y +PT IQAQ P MSG+++ G+ +TGSGKTLA++LP HI +Q Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369 Query: 623 PPI 631 P + Sbjct: 370 PEL 372 >AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical protein Y54G11A.3 protein. Length = 504 Score = 72.9 bits (171), Expect = 2e-13 Identities = 33/76 (43%), Positives = 54/76 (71%), Gaps = 1/76 (1%) Frame = +2 Query: 398 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSG 574 S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ GV QTGSG Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133 Query: 575 KTLAYILPXIVHINNQ 622 KTLA++LP ++HI+ Q Sbjct: 134 KTLAFLLPALLHIDAQ 149 >AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and belle-like helicase protein1, isoform c protein. Length = 660 Score = 69.7 bits (163), Expect = 2e-12 Identities = 35/83 (42%), Positives = 48/83 (57%) Frame = +2 Query: 365 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 544 ++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++ Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178 Query: 545 LXGVXQTGSGKTLAYILPXIVHI 613 L QTGSGKT A++LP I HI Sbjct: 179 LMSCAQTGSGKTAAFLLPIIQHI 201 >AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and belle-like helicase protein1, isoform b protein. Length = 644 Score = 69.7 bits (163), Expect = 2e-12 Identities = 35/83 (42%), Positives = 48/83 (57%) Frame = +2 Query: 365 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 544 ++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++ Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162 Query: 545 LXGVXQTGSGKTLAYILPXIVHI 613 L QTGSGKT A++LP I HI Sbjct: 163 LMSCAQTGSGKTAAFLLPIIQHI 185 >AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and belle-like helicase protein1, isoform a protein. Length = 641 Score = 69.7 bits (163), Expect = 2e-12 Identities = 35/83 (42%), Positives = 48/83 (57%) Frame = +2 Query: 365 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 544 ++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++ Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159 Query: 545 LXGVXQTGSGKTLAYILPXIVHI 613 L QTGSGKT A++LP I HI Sbjct: 160 LMSCAQTGSGKTAAFLLPIIQHI 182 >AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical protein Y71H2AM.19 protein. Length = 643 Score = 66.1 bits (154), Expect = 2e-11 Identities = 28/80 (35%), Positives = 45/80 (56%) Frame = +2 Query: 389 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTG 568 V +G +V PI F + + +++++ +KT GY PTP+Q P G++L QTG Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213 Query: 569 SGKTLAYILPXIVHINNQPP 628 SGKT A+++P + I P Sbjct: 214 SGKTAAFLVPLVNAILQDGP 233 >AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical protein H27M09.1 protein. Length = 630 Score = 64.5 bits (150), Expect = 6e-11 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Frame = +2 Query: 326 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 502 P + ++S + E R + ++ G + PI F E FP + + + K G PT Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215 Query: 503 IQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIV 607 IQ QG P+A+SG+++ G+ TGSGKT+ ++LP ++ Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVM 250 >U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase protein. Length = 763 Score = 56.0 bits (129), Expect = 2e-08 Identities = 25/65 (38%), Positives = 37/65 (56%) Frame = +2 Query: 419 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILP 598 P + F EAN + +Q+ V GY + TPIQ P+ G ++ QTGSGKT A++LP Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398 Query: 599 XIVHI 613 + + Sbjct: 399 IMTRL 403 >L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase protein. Length = 763 Score = 56.0 bits (129), Expect = 2e-08 Identities = 25/65 (38%), Positives = 37/65 (56%) Frame = +2 Query: 419 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILP 598 P + F EAN + +Q+ V GY + TPIQ P+ G ++ QTGSGKT A++LP Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398 Query: 599 XIVHI 613 + + Sbjct: 399 IMTRL 403 >AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line helicase protein 1 protein. Length = 763 Score = 56.0 bits (129), Expect = 2e-08 Identities = 25/65 (38%), Positives = 37/65 (56%) Frame = +2 Query: 419 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILP 598 P + F EAN + +Q+ V GY + TPIQ P+ G ++ QTGSGKT A++LP Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398 Query: 599 XIVHI 613 + + Sbjct: 399 IMTRL 403 >AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA helicase-3 protein. Length = 720 Score = 54.8 bits (126), Expect = 5e-08 Identities = 23/60 (38%), Positives = 36/60 (60%) Frame = +2 Query: 419 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILP 598 P + F +++ P +++ V+ GY TPIQ P+ GK++ QTGSGKT A++LP Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355 >AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line helicase protein 3 protein. Length = 720 Score = 54.8 bits (126), Expect = 5e-08 Identities = 23/60 (38%), Positives = 36/60 (60%) Frame = +2 Query: 419 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILP 598 P + F +++ P +++ V+ GY TPIQ P+ GK++ QTGSGKT A++LP Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355 >AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical protein Y71G12B.8 protein. Length = 763 Score = 54.4 bits (125), Expect = 6e-08 Identities = 23/65 (35%), Positives = 38/65 (58%) Frame = +2 Query: 431 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVH 610 FE+ N + + GY +PTPIQ P+A++GK++ TG+GKT A++LP + Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209 Query: 611 INNQP 625 + +P Sbjct: 210 MIYRP 214 >U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. Length = 974 Score = 51.2 bits (117), Expect = 6e-07 Identities = 23/61 (37%), Positives = 35/61 (57%) Frame = +2 Query: 431 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVH 610 F EAN + +++ V GY + TPIQ P+ G ++ QTGSGKT A++LP + Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613 Query: 611 I 613 + Sbjct: 614 L 614 >U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2 protein. Length = 974 Score = 51.2 bits (117), Expect = 6e-07 Identities = 23/61 (37%), Positives = 35/61 (57%) Frame = +2 Query: 431 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVH 610 F EAN + +++ V GY + TPIQ P+ G ++ QTGSGKT A++LP + Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613 Query: 611 I 613 + Sbjct: 614 L 614 >AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line helicase protein 2 protein. Length = 974 Score = 51.2 bits (117), Expect = 6e-07 Identities = 23/61 (37%), Positives = 35/61 (57%) Frame = +2 Query: 431 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVH 610 F EAN + +++ V GY + TPIQ P+ G ++ QTGSGKT A++LP + Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613 Query: 611 I 613 + Sbjct: 614 L 614 >AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical protein Y94H6A.5a protein. Length = 825 Score = 50.0 bits (114), Expect = 1e-06 Identities = 20/64 (31%), Positives = 37/64 (57%) Frame = +2 Query: 413 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYI 592 H +++ V + ++ G+ +PTPIQ + P M GK++ + +TGSGKT A++ Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79 Query: 593 LPXI 604 +P + Sbjct: 80 IPML 83 >AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical protein Y94H6A.5b protein. Length = 871 Score = 50.0 bits (114), Expect = 1e-06 Identities = 20/64 (31%), Positives = 37/64 (57%) Frame = +2 Query: 413 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYI 592 H +++ V + ++ G+ +PTPIQ + P M GK++ + +TGSGKT A++ Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79 Query: 593 LPXI 604 +P + Sbjct: 80 IPML 83 >AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical protein H20J04.4a protein. Length = 488 Score = 48.0 bits (109), Expect = 6e-06 Identities = 21/65 (32%), Positives = 37/65 (56%) Frame = +2 Query: 431 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVH 610 F + ++ Q ++TM K TP+QA P + G ++ G +TG+GKTLA+ +P + Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150 Query: 611 INNQP 625 ++ P Sbjct: 151 LSVDP 155 >AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical protein H20J04.4b protein. Length = 561 Score = 48.0 bits (109), Expect = 6e-06 Identities = 21/65 (32%), Positives = 37/65 (56%) Frame = +2 Query: 431 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVH 610 F + ++ Q ++TM K TP+QA P + G ++ G +TG+GKTLA+ +P + Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150 Query: 611 INNQP 625 ++ P Sbjct: 151 LSVDP 155 >Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical protein R05D11.4 protein. Length = 581 Score = 47.6 bits (108), Expect = 7e-06 Identities = 27/92 (29%), Positives = 44/92 (47%) Frame = +2 Query: 338 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 517 V KR +++ R + + G + N I F +++ + + ++P+PIQ Q Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156 Query: 518 WPIAMSGKNLXGVXQTGSGKTLAYILPXIVHI 613 P +N+ TGSGKTLA+ LP I I Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEI 188 >U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical protein F55F8.2a protein. Length = 746 Score = 46.8 bits (106), Expect = 1e-05 Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 1/56 (1%) Frame = +2 Query: 449 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLXGVXQTGSGKTLAYILPXIVHI 613 P+ V + ++ MG+ EPT IQ+ P A+ + ++ G +TGSGKTLA+ +P + + Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARL 218 >Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical protein T26G10.1 protein. Length = 489 Score = 44.4 bits (100), Expect = 7e-05 Identities = 20/65 (30%), Positives = 36/65 (55%) Frame = +2 Query: 431 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVH 610 F E + + +G+ +P+ IQ P A+ GK++ G+ +TGSGKT A+ +P + Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105 Query: 611 INNQP 625 + + P Sbjct: 106 LLDHP 110 >AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA helicase-4 protein. Length = 1156 Score = 44.4 bits (100), Expect = 7e-05 Identities = 22/82 (26%), Positives = 39/82 (47%) Frame = +2 Query: 368 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 547 ++ K + VE+ + + P + +K M PTPIQ + M G ++ Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776 Query: 548 XGVXQTGSGKTLAYILPXIVHI 613 TGSGKTLA+++P ++ + Sbjct: 777 VACAHTGSGKTLAFLIPFVIKL 798 >AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase protein 4 protein. Length = 1156 Score = 44.4 bits (100), Expect = 7e-05 Identities = 22/82 (26%), Positives = 39/82 (47%) Frame = +2 Query: 368 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 547 ++ K + VE+ + + P + +K M PTPIQ + M G ++ Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776 Query: 548 XGVXQTGSGKTLAYILPXIVHI 613 TGSGKTLA+++P ++ + Sbjct: 777 VACAHTGSGKTLAFLIPFVIKL 798 >AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical protein Y23H5B.6 protein. Length = 732 Score = 43.2 bits (97), Expect = 2e-04 Identities = 18/47 (38%), Positives = 30/47 (63%) Frame = +2 Query: 464 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXI 604 +G+K Y +PT IQ +++G ++ G +TGSGKTLA ++P + Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVL 135 >AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical protein B0511.6 protein. Length = 544 Score = 40.7 bits (91), Expect = 9e-04 Identities = 19/47 (40%), Positives = 30/47 (63%) Frame = +2 Query: 464 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXI 604 + V+ +G+ T IQA+ + GK++ +TGSGKTLA++LP I Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI 127 >AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved germline helicase protein1 protein. Length = 430 Score = 40.7 bits (91), Expect = 9e-04 Identities = 19/56 (33%), Positives = 35/56 (62%) Frame = +2 Query: 467 GVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVHINNQPPIR 634 G+ G+++P+PIQ +A++G+++ + G+GKT AY +P I I QP ++ Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALK 110 >Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.elegans mRNA for eIF-4A homologue. ). Length = 402 Score = 38.7 bits (86), Expect = 0.003 Identities = 15/69 (21%), Positives = 39/69 (56%) Frame = +2 Query: 422 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPX 601 ++ F++ + + +G+ G+++P+ IQ + +GK++ Q+G+GKT + + Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87 Query: 602 IVHINNQPP 628 + I+++ P Sbjct: 88 LQRIDHEDP 96 >U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor protein 1, isoforma protein. Length = 402 Score = 38.7 bits (86), Expect = 0.003 Identities = 15/69 (21%), Positives = 39/69 (56%) Frame = +2 Query: 422 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPX 601 ++ F++ + + +G+ G+++P+ IQ + +GK++ Q+G+GKT + + Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87 Query: 602 IVHINNQPP 628 + I+++ P Sbjct: 88 LQRIDHEDP 96 >AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical protein C24H12.4a protein. Length = 634 Score = 38.7 bits (86), Expect = 0.003 Identities = 15/58 (25%), Positives = 33/58 (56%) Frame = +2 Query: 431 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXI 604 F + + + + + +G+++ +Q +A+ KN+ G +TGSGKT A+++P + Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLV 148 >Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical protein T07D4.4c protein. Length = 613 Score = 37.5 bits (83), Expect = 0.008 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = +2 Query: 422 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLXGVXQTGSGKTLAYIL 595 I F E V + + TM ++ PT IQ P+ + NL Q+G+GKT A++L Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267 Query: 596 PXIVHIN 616 + I+ Sbjct: 268 TMLCRID 274 >Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical protein T07D4.4b protein. Length = 638 Score = 37.5 bits (83), Expect = 0.008 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = +2 Query: 422 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLXGVXQTGSGKTLAYIL 595 I F E V + + TM ++ PT IQ P+ + NL Q+G+GKT A++L Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292 Query: 596 PXIVHIN 616 + I+ Sbjct: 293 TMLCRID 299 >Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein T07D4.4a protein. Length = 1022 Score = 37.5 bits (83), Expect = 0.008 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = +2 Query: 422 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLXGVXQTGSGKTLAYIL 595 I F E V + + TM ++ PT IQ P+ + NL Q+G+GKT A++L Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676 Query: 596 PXIVHIN 616 + I+ Sbjct: 677 TMLCRID 683 >AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical protein F33D11.10 protein. Length = 399 Score = 37.5 bits (83), Expect = 0.008 Identities = 15/69 (21%), Positives = 37/69 (53%) Frame = +2 Query: 416 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYIL 595 N I F++ + + +G+ G+++P+ IQ + P + +++ Q+G+GKT + + Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82 Query: 596 PXIVHINNQ 622 + ++ Q Sbjct: 83 SVLQSLDTQ 91 >U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical protein F55F8.2b protein. Length = 579 Score = 37.1 bits (82), Expect = 0.011 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Frame = +2 Query: 485 YKEPTPIQAQGWPIAMSGK-NLXGVXQTGSGKTLAYILPXIVHI 613 + EPT IQ+ P A+ + ++ G +TGSGKTLA+ +P + + Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARL 51 >AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical protein Y55F3BR.1 protein. Length = 728 Score = 36.7 bits (81), Expect = 0.014 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +2 Query: 431 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILP 598 FEE + + ++ + PT +Q++ P + G + +TGSGKT A+ LP Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59 >EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. Length = 973 Score = 36.3 bits (80), Expect = 0.018 Identities = 14/64 (21%), Positives = 36/64 (56%) Frame = +2 Query: 431 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVH 610 FE + +K + P+P+QA+ P+ + G+++ ++G+GKTL + + + + Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83 Query: 611 INNQ 622 ++++ Sbjct: 84 LDSR 87 >CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical protein T06A10.1 protein. Length = 973 Score = 36.3 bits (80), Expect = 0.018 Identities = 14/64 (21%), Positives = 36/64 (56%) Frame = +2 Query: 431 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVH 610 FE + +K + P+P+QA+ P+ + G+++ ++G+GKTL + + + + Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83 Query: 611 INNQ 622 ++++ Sbjct: 84 LDSR 87 >AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical protein Y65B4A.6 protein. Length = 399 Score = 35.9 bits (79), Expect = 0.024 Identities = 14/67 (20%), Positives = 36/67 (53%) Frame = +2 Query: 422 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPX 601 I F++ + + +G+ G+++P+ IQ + P + +++ Q+G+GKT + + Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84 Query: 602 IVHINNQ 622 + ++ Q Sbjct: 85 LQSLDTQ 91 >Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical protein ZK512.2 protein. Length = 578 Score = 31.1 bits (67), Expect = 0.69 Identities = 20/66 (30%), Positives = 33/66 (50%) Frame = +2 Query: 422 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPX 601 ++ F E P+ ++ V YK T +Q ++ ++ TGSGKTLA++LP Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67 Query: 602 IVHINN 619 + I N Sbjct: 68 MRMIQN 73 >L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical protein ZK686.2 protein. Length = 593 Score = 30.3 bits (65), Expect = 1.2 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = +2 Query: 563 TGSGKTLAYILPXIVHINNQP 625 TGSGKT+ Y+LP + + ++P Sbjct: 165 TGSGKTICYVLPVLAAVGSKP 185 >U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical protein F57B9.3 protein. Length = 363 Score = 29.9 bits (64), Expect = 1.6 Identities = 14/51 (27%), Positives = 28/51 (54%) Frame = +2 Query: 464 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPXIVHIN 616 +G+ G+++P+ IQ +GK++ Q GSGKT+ ++ + I+ Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGID 59 >Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical protein F08A8.8 protein. Length = 222 Score = 29.5 bits (63), Expect = 2.1 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +3 Query: 132 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 248 +ETV+ LE N +RL A VA E LE++ GK N Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109 >AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine receptor, class z protein9 protein. Length = 281 Score = 29.1 bits (62), Expect = 2.8 Identities = 15/61 (24%), Positives = 32/61 (52%) Frame = -2 Query: 544 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 365 ++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85 Query: 364 D 362 + Sbjct: 86 N 86 >AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine receptor, class z protein8 protein. Length = 281 Score = 29.1 bits (62), Expect = 2.8 Identities = 15/61 (24%), Positives = 32/61 (52%) Frame = -2 Query: 544 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 365 ++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85 Query: 364 D 362 + Sbjct: 86 N 86 >Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical protein T20D3.5b protein. Length = 312 Score = 28.7 bits (61), Expect = 3.7 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = -2 Query: 187 RRIIAEFVASSKFGTTVSTAIIPV 116 +++I +FVA S G T+STA P+ Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243 >Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical protein T20D3.5a protein. Length = 221 Score = 28.7 bits (61), Expect = 3.7 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = -2 Query: 187 RRIIAEFVASSKFGTTVSTAIIPV 116 +++I +FVA S G T+STA P+ Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152 >Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical protein M04G12.1b protein. Length = 403 Score = 27.9 bits (59), Expect = 6.4 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = +2 Query: 326 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 484 P PTVL SP+ V N +V H + +AN D +QQ ++++G Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194 >Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical protein M04G12.1a protein. Length = 457 Score = 27.9 bits (59), Expect = 6.4 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = +2 Query: 326 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 484 P PTVL SP+ V N +V H + +AN D +QQ ++++G Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221 >Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical protein D2005.5 protein. Length = 1119 Score = 27.9 bits (59), Expect = 6.4 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +2 Query: 527 AMSGKNLXGVXQTGSGKTLAYILPXIVHINNQ 622 A+ GKN V TGSGKT I + HI + Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER 413 >AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical protein Y46G5A.4 protein. Length = 2145 Score = 27.9 bits (59), Expect = 6.4 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Frame = +2 Query: 482 GYKEPTPIQAQGW-PIAMSGKNLXGVXQTGSGKTLAYILPXIVHINNQP 625 G+K PIQ Q + + S +N+ GSGKT L + H N P Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTP 1366 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,348,221 Number of Sequences: 27780 Number of extensions: 273267 Number of successful extensions: 881 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 847 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 878 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1406256614 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -