Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_G23
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   1.7  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   6.7  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   6.7  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +1

Query: 316 YTNMVSDVVYEMLPDYKFKEVVAKDSLDVYIEHRIMLEARNHR 444
           Y+ +   V +E LP+ +  E   + S+DV ++  +  E  N +
Sbjct: 44  YSPVSKPVSFESLPNRRLHEEFLRSSVDVLLQEAV-FEGTNRK 85


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = +1

Query: 412 HRIMLEARNHRIPGEMRDPRNRYPPELIRRFEVYFKDLSTSKSVPIREVKAEHI 573
           H++      HR P    +   ++ P      E+  + L  SK  P  EVK +H+
Sbjct: 82  HKVFQHLMIHR-PNWWHELETKFNPH----HEIKLQHLHQSKFNPHEEVKLQHL 130


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 459 HFSRNPVVSGFQHNSVLNVYIQGI 388
           HF +  ++ G ++  VLNVY + +
Sbjct: 42  HFFKKNLIVGSENCLVLNVYTKNL 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,530
Number of Sequences: 336
Number of extensions: 3187
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)