Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_G23
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm (li... 124 4e-29
Z81039-5|CAB02770.1| 812|Caenorhabditis elegans Hypothetical pr... 36 0.033
AF016452-15|AAX88811.1| 349|Caenorhabditis elegans Hypothetical... 30 1.6
AF016452-14|AAB66020.1| 409|Caenorhabditis elegans Hypothetical... 30 1.6
Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical p... 29 2.2
Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical pr... 29 2.2
AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical ... 29 2.2
Z81132-14|CAB03432.3| 378|Caenorhabditis elegans Hypothetical p... 29 3.8
U80952-3|AAB38093.1| 279|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical ... 29 3.8
AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical ... 29 3.8
U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93388-14|CAN86927.1| 226|Caenorhabditis elegans Hypothetical p... 28 6.7
Z93388-13|CAB07666.1| 383|Caenorhabditis elegans Hypothetical p... 28 6.7
U53339-4|AAA96200.1| 298|Caenorhabditis elegans Hypothetical pr... 28 6.7
>AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 7 protein.
Length = 730
Score = 124 bits (300), Expect = 4e-29
Identities = 65/190 (34%), Positives = 114/190 (60%), Gaps = 9/190 (4%)
Frame = +1
Query: 112 DYTADKESFKNFFVDFCQTDDEGK-KYFKYAEQLTKVAHREQIAFEVDLDDLHEMNE--- 279
D+ A+K ++FF ++ +++G K F Y +Q+ ++A R++ A V++D + E +
Sbjct: 9 DWAAEKTKIRSFFDEYYVDNEDGSGKAFPYRDQVFEIARRDKQAIVVNVDHIKESDIPDA 68
Query: 280 -DLTEAVKQNTRRYTNMVSDVVYEMLPDYKF-KEVVAKDSLDVYIEHRIMLEARNHRIPG 453
+L+EA+ NT+RY + D + +M+ DY K+ D+LD Y+ R+ ++ RN
Sbjct: 69 LELSEAITSNTKRYEVLFKDTISDMIQDYLGDKQAPVIDALDAYMFQRLHMD-RNEGAAN 127
Query: 454 E---MRDPRNRYPPELIRRFEVYFKDLSTSKSVPIREVKAEHIGKLXTVRGIVTRCTDVK 624
E ++D R +YPP+L++RFEVYF + +R +KA IG L +++G+V R T+VK
Sbjct: 128 EEVSLQDKRKKYPPQLLQRFEVYFTTDDAAHETCVRNIKATEIGHLVSMKGVVIRATEVK 187
Query: 625 PLLVVATYSC 654
P + V TY+C
Sbjct: 188 PCVEVMTYTC 197
>Z81039-5|CAB02770.1| 812|Caenorhabditis elegans Hypothetical
protein C25D7.6 protein.
Length = 812
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 502 FEVYFKDLSTSKSVPIREVKAEHIGKLXTVRGIVTRCTDVKPLLVVATYSC 654
F V F+ + V R +K+ ++G L GIVT+C+ V+ L+ + + C
Sbjct: 103 FHVGFEGTFGERHVNPRTLKSSYLGNLVCCEGIVTKCSTVRQKLLTSVHYC 153
>AF016452-15|AAX88811.1| 349|Caenorhabditis elegans Hypothetical
protein T05H4.15c protein.
Length = 349
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +1
Query: 229 EQIAFEVDLDDLHEMNEDLTEAVKQNTRRYTNMVSDVVYEMLPDYKFKEVVAKD 390
EQ++F + D L EM++D+++ TRR T DV+ +++ ++ V+ +D
Sbjct: 8 EQLSFGLFGDLLDEMHQDISDQPTLATRRATQKEFDVLCKLIGGFEKWSVLNED 61
>AF016452-14|AAB66020.1| 409|Caenorhabditis elegans Hypothetical
protein T05H4.15a protein.
Length = 409
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +1
Query: 229 EQIAFEVDLDDLHEMNEDLTEAVKQNTRRYTNMVSDVVYEMLPDYKFKEVVAKD 390
EQ++F + D L EM++D+++ TRR T DV+ +++ ++ V+ +D
Sbjct: 8 EQLSFGLFGDLLDEMHQDISDQPTLATRRATQKEFDVLCKLIGGFEKWSVLNED 61
>Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical
protein F36G9.1 protein.
Length = 356
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -3
Query: 629 SGFTSVHRVTIPRTVXSFPICSALTSLIGTLFDVDKSL-KYTSNLLISSGGYLFLGSLIS 453
S F SVH +TIPR +C + + + + L + NL SS G L +
Sbjct: 115 SFFVSVHSITIPRIFQKLAVCFGVAMAVLRVIILKYPLNRRGQNLKRSSSGICILLIVCI 174
Query: 452 PGI-LWF 435
P I WF
Sbjct: 175 PHIPFWF 181
>Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical
protein F36G3.1 protein.
Length = 964
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = +1
Query: 277 EDLTEAVKQ-NTRRYTNMVSDVVYEMLPDYKFKEVVAKDSLDVYIEHRIMLEARNHRIPG 453
+DL E VK + + N V + YE LPD + +AK + V E+ I ++ ++
Sbjct: 410 KDLNENVKAFDAEHHENSVLE--YEQLPDVFSEITIAKTPIPVVHENSISGVSKESQVSF 467
Query: 454 EMRDPRNRYPPELIRRFEVYFKDLSTSKSVPIREVKAEHI 573
+N P I EV + ++P + +
Sbjct: 468 NQEAVQNELMPTHIISDEVETSSTTADNNIPFSDCSTHKV 507
>AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical
protein Y102A11A.9 protein.
Length = 332
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = +1
Query: 127 KESFKNFFVDFCQTDDEGKKYFKYAEQLTKVAHREQIAFEVDLDDLHEMNEDLTEAVKQN 306
KE N+ + +G+++ K +E +K + + LD L + EDL+E K+N
Sbjct: 219 KEVKNNYASMLEKNKKKGEEFIKQSEN-SKAVVEKTVQISTVLDSLQKEREDLSEIRKKN 277
Query: 307 TRRYTNMVSDVV 342
++ + +++
Sbjct: 278 EQKIEGLSQELI 289
>Z81132-14|CAB03432.3| 378|Caenorhabditis elegans Hypothetical
protein T26E4.3 protein.
Length = 378
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 193 KYAEQLTKVAHREQIAFEVDLDDLHEMNEDLTEAVKQNTRRYT 321
+Y + + +H +I+ V DDL+ +NE T+++K NT YT
Sbjct: 252 EYLVDIYEKSH-SRISVVVLGDDLNFVNEVFTQSIKSNTSSYT 293
>U80952-3|AAB38093.1| 279|Caenorhabditis elegans Hypothetical
protein F54H5.3 protein.
Length = 279
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 238 AFEVDLDDLHEMNEDLTEAVKQNTRRYTNMV 330
A EVDLD ++ +L+E VK+ +Y+N+V
Sbjct: 226 AVEVDLDRQAQLVNELSERVKRGEIQYSNLV 256
>AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical
protein Y17G7B.5a protein.
Length = 881
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 547 IREVKAEHIGKLXTVRGIVTRCTDVKPLLVVATYSC 654
IR ++ H+ L G+VT + + P L V Y C
Sbjct: 270 IRMLRQVHLNMLIRTAGVVTIASGILPQLAVVKYDC 305
>AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical
protein C09E8.1a protein.
Length = 783
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 305 IPEDTLIWCQTWFMKCCLIT 364
+P +I C TW CC++T
Sbjct: 711 VPPLLIIMCNTWIRSCCIVT 730
>U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical
protein C24A3.1 protein.
Length = 638
Score = 28.3 bits (60), Expect = 5.0
Identities = 24/117 (20%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Frame = +1
Query: 202 EQLTKVAHREQIAFEVDLDDLHEMNEDLTEAVKQNTRRYTNMVSDVVYEMLPDYKFKEVV 381
++L + ++ +A + +++L + + E + + TRR + ++ + E+ +
Sbjct: 241 QRLQDMIRQQDLARQDIMNNLSKKGDVDKEKLNEETRRLNDKINLITSEVTKKMTENQQK 300
Query: 382 AKDSLDVYIE-HRIMLEARNHRI---PGEMRDPRNRYPPELIRRFEVYFKDLSTSKS 540
AKD + I M+ A++ RI EMR EL + E+ K +++ K+
Sbjct: 301 AKDDFNSRISVLESMIRAQSERIVANENEMRHSFEAKLAELSGQLELAMKQITSEKA 357
>Z93388-14|CAN86927.1| 226|Caenorhabditis elegans Hypothetical
protein T10C6.10b protein.
Length = 226
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 466 PRNRYPPELIRRFEVYFKDLSTSKSVPIREVKAEHIGKLXTV 591
P+NR PP + F + K S + + + E+ A HI +L V
Sbjct: 10 PKNRRPPPELIPFSQFLKLPSKALRIVLHELDAHHIFELSQV 51
>Z93388-13|CAB07666.1| 383|Caenorhabditis elegans Hypothetical
protein T10C6.10a protein.
Length = 383
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 466 PRNRYPPELIRRFEVYFKDLSTSKSVPIREVKAEHIGKLXTV 591
P+NR PP + F + K S + + + E+ A HI +L V
Sbjct: 10 PKNRRPPPELIPFSQFLKLPSKALRIVLHELDAHHIFELSQV 51
>U53339-4|AAA96200.1| 298|Caenorhabditis elegans Hypothetical
protein F58A6.5 protein.
Length = 298
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 12/64 (18%)
Frame = +1
Query: 250 DLDDLHEMNEDLTEAVKQNTRRYTNMVSDVVYEM------LPDY------KFKEVVAKDS 393
D D+ +E ED+T AVK T+++ DV+ L +Y KF E V + +
Sbjct: 4 DADNGYERLEDITNAVKNEGTEVTHVLRDVIRNYSDLGHDLQEYYDKNLRKFPETVERTA 63
Query: 394 LDVY 405
DVY
Sbjct: 64 NDVY 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,448,846
Number of Sequences: 27780
Number of extensions: 303204
Number of successful extensions: 873
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -