Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_G23
(655 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02060.1 68417.m00276 prolifera protein (PRL) / DNA replicati... 118 3e-27
At5g44635.1 68418.m05469 minichromosome maintenance family prote... 40 0.001
At5g46280.1 68418.m05697 DNA replication licensing factor, putat... 39 0.003
At3g09660.1 68416.m01145 minichromosome maintenance family prote... 38 0.004
At3g50280.1 68416.m05498 transferase family protein similar to a... 33 0.17
At3g50300.1 68416.m05501 transferase family protein similar to a... 30 1.2
At1g08600.1 68414.m00953 SNF2 domain-containing protein / helica... 30 1.2
At1g44900.1 68414.m05144 DNA replication licensing factor, putat... 29 2.0
At4g37370.1 68417.m05292 cytochrome P450, putative similar to Cy... 29 2.7
At1g16380.1 68414.m01959 cation/proton exchanger, putative (CHX1... 29 3.6
At1g12070.1 68414.m01393 Rho GDP-dissociation inhibitor family p... 28 4.7
At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl transfera... 28 4.7
At1g47390.1 68414.m05246 F-box family protein contains F-box dom... 27 8.2
>At4g02060.1 68417.m00276 prolifera protein (PRL) / DNA replication
licensing factor Mcm7 (MCM7) identical to DNA
replication licensing factor Mcm7 SP|P43299 PROLIFERA
protein {Arabidopsis thaliana}; contains Pfam profile
PF00493: MCM2/3/5 family
Length = 716
Score = 118 bits (285), Expect = 3e-27
Identities = 74/188 (39%), Positives = 104/188 (55%), Gaps = 3/188 (1%)
Frame = +1
Query: 100 MAMRDYTADKESFKNFFVDFCQTDDEGKKYFKYAEQLTKVAHREQIAFEVDLDDLHEMNE 279
M D+ DK K F +F D G+ KY E L +V++R+ A +VDLDDL +
Sbjct: 1 MKDHDFDGDKGLAKGFLENFA--DANGRS--KYMEILQEVSNRKIRAIQVDLDDLFNYKD 56
Query: 280 DLTE---AVKQNTRRYTNMVSDVVYEMLPDYKFKEVVAKDSLDVYIEHRIMLEARNHRIP 450
+ E + +NTRRY ++ S V E+LP+ E D D+ + R A +
Sbjct: 57 ESEEFLGRLTENTRRYVSIFSAAVDELLPEPT--EAFPDDDHDILMTQR----ADDGTDN 110
Query: 451 GEMRDPRNRYPPELIRRFEVYFKDLSTSKSVPIREVKAEHIGKLXTVRGIVTRCTDVKPL 630
++ DP + P E+ R +EVYFK S + IREVKA HIG+L + GIVTRC+DVKPL
Sbjct: 111 PDVSDPHQQIPSEIKRYYEVYFKAPSKGRPSTIREVKASHIGQLVRISGIVTRCSDVKPL 170
Query: 631 LVVATYSC 654
+ VA Y+C
Sbjct: 171 MAVAVYTC 178
>At5g44635.1 68418.m05469 minichromosome maintenance family protein
/ MCM family protein similar to SP|P97311 DNA
replication licensing factor MCM6 {Mus musculus};
contains Pfam profile PF00493: MCM2/3/5 family
Length = 831
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/96 (30%), Positives = 45/96 (46%)
Frame = +1
Query: 367 FKEVVAKDSLDVYIEHRIMLEARNHRIPGEMRDPRNRYPPELIRRFEVYFKDLSTSKSVP 546
F + + K D Y+ L R EM +P + V F +L +K
Sbjct: 63 FNDALQKAIADEYLRFEPYLRNACKRFVIEM-NPSFISDDTPNKDINVSFYNLPFTKR-- 119
Query: 547 IREVKAEHIGKLXTVRGIVTRCTDVKPLLVVATYSC 654
+RE+ IGKL +V G+VTR ++V+P L+ T+ C
Sbjct: 120 LRELTTAEIGKLVSVTGVVTRTSEVRPELLYGTFKC 155
>At5g46280.1 68418.m05697 DNA replication licensing factor, putative
similar to SP|Q43704 DNA replication licensing factor
MCM3 homolog (Replication origin activator) (ROA
protein) {Zea mays}; contains Pfam profile PF00493:
MCM2/3/5 family
Length = 776
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 463 DPRNRYPPELIR-RFEVYFKDLSTSKSVPIREVKAEHIGKLXTVRGIVTRCTDVKPLLVV 639
DP+ EL+ FE YF S+ V RE+ ++ IG + V GIVT+C+ V+P +V
Sbjct: 79 DPKYLKEGELVLVGFEGYF----VSRVVTPRELLSDFIGSMVCVEGIVTKCSLVRPKVVK 134
Query: 640 ATYSC 654
+ + C
Sbjct: 135 SVHFC 139
>At3g09660.1 68416.m01145 minichromosome maintenance family protein
/ MCM family protein similar to SP|P49717 DNA
replication licensing factor MCM4 (CDC21 homolog) {Mus
musculus}; contains Pfam profile PF00493: MCM2/3/5
family
Length = 777
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 538 SVPIREVKAEHIGKLXTVRGIVTRCTDVKPLLVVATYSC 654
S+ ++ ++A +IGKL TV G V + + VKPL+ + C
Sbjct: 142 SISLKNLRAAYIGKLVTVHGTVVKVSTVKPLVTQMAFDC 180
>At3g50280.1 68416.m05498 transferase family protein similar to
anthranilate N-hydroxycinnamoyl/benzoyltransferase,
Dianthus caryophyllus, PIR:T10717 [gi:2239091]; contains
Pfam transferase family domain PF002458
Length = 443
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 499 RFEVYFKDLSTSKSVPIREVKAEHI-GKLXTVRGIVTRCTDVKPLLV 636
RFEVY D K + +R + I GKL RGI C DV L+
Sbjct: 379 RFEVYDNDFGWGKPIAVRAGPSNSISGKLVFFRGIEEGCIDVHAFLL 425
>At3g50300.1 68416.m05501 transferase family protein similar to
anthranilate N-hydroxycinnamoyl/benzoyltransferase,
Dianthus caryophyllus [gi:2239091]; contains Pfam
transferase family domain PF002458
Length = 448
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 502 FEVYFKDLSTSKSVPIREVKAEHIG-KLXTVRGIVTRCTDVKPLLVVATYS 651
F+VY D K + +R A IG KL RGI DV +L ++ +S
Sbjct: 380 FQVYDNDFGLGKPMAVRAGPANGIGGKLVVFRGIEEGSIDVHAILTLSLWS 430
>At1g08600.1 68414.m00953 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|P46100
Transcriptional regulator ATRX {Homo sapiens}; contains
PFam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain;
non-consensus GC donor splice site at exon boundary 28614
Length = 1457
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 202 EQLTKVAHREQIAFEVDLDDLHEMNEDLTEAVKQNTRRYTNMVSDVV 342
+Q+ + +E++ + DD E +E +TE KQN ++N+V +
Sbjct: 1258 QQVHRTISKEEMLHLFEFDDDDEKSEAVTEISKQNEAGHSNLVEQAI 1304
>At1g44900.1 68414.m05144 DNA replication licensing factor, putative
similar to DNA replication licensing factor MCM2 from
{Xenopus laevis} SP|P55861, SP|P49736 {Homo sapiens};
contains Pfam profile PF00493: MCM2/3/5 family
Length = 928
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 505 EVYFKDLSTSKSVPIREVKAEHIGKLXTVRGIVTRCTDVKPLLVVATYSC 654
++Y + + + IR ++ H+ + + G+VTR + V P L Y C
Sbjct: 298 KIYVRVTNLPVNDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDC 347
>At4g37370.1 68417.m05292 cytochrome P450, putative similar to
Cytochrome P450 91A1 (SP:Q9FG65 )[Arabidopsis thaliana];
cytochrome P450, Glycyrrhiza echinata, AB001379
Length = 497
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +2
Query: 68 SNYSNNIFLTKWQCVITLQIKNLSRTFSWIFVKLMMKEKSILNMLNNLLKL 220
SN+ N FL+ + I + LSR FS FVK+ MK NN+L++
Sbjct: 138 SNHRLNSFLSIRKDEIRRLVFRLSRNFSQEFVKVDMKSMLSDLTFNNILRM 188
>At1g16380.1 68414.m01959 cation/proton exchanger, putative (CHX1)
monovalent cation:proton antiporter family 2 (CPA2)
member, PMID:11500563
Length = 785
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 581 SFPICSALTSLIGTLFDVDKSLKYTSNLLISSGGYLFLGSLISPGILWFL 432
SF + +A LIG D+D + N ++ + G L + +I LWFL
Sbjct: 84 SFLLRTAFVFLIGLEIDLDFMKRNLKNSIVITLGSLVISGIIWLPFLWFL 133
>At1g12070.1 68414.m01393 Rho GDP-dissociation inhibitor family
protein similar to SP|P52565 Rho GDP-dissociation
inhibitor 1 (Rho GDI 1) (Rho-GDI alpha) {Homo sapiens};
contains Pfam profile PF02115: RHO protein GDP
dissociation inhibitor
Length = 223
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 133 SFKNFFVDFCQTDDEGKKYFKYAEQLTKVAHREQIAFEVDLDDLHEMNEDLTEAV 297
S KN C TDD+ ++ K E +A +EQ+ + D + L E L +V
Sbjct: 23 SRKNSHSSMCPTDDDEEEEDKKLELGPMIALKEQLEKDKDDESLRRWKEQLLGSV 77
>At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 480
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +1
Query: 115 YTADKESFKNFFVDFCQTDDEGKKYFKYAEQLTKVAHREQIAFEVDLDDLHEMNEDLTEA 294
+ A + +FF+ + D F+Y + K+ I + LD + + N+D +
Sbjct: 137 FYASNANVLSFFLHLPKLDKTVSCEFRYLTEPLKIPGCVPITGKDFLDTVQDRNDDAYKL 196
Query: 295 VKQNTRRY 318
+ NT+RY
Sbjct: 197 LLHNTKRY 204
>At1g47390.1 68414.m05246 F-box family protein contains F-box domain
Pfam:PF00646
Length = 370
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = -3
Query: 593 RTVXSFPICSALTSLIGTLFD-VDKSLKYTSNLLISSGGYLFLGSLIS-PGILWFLASNI 420
+T+ S+P T + + D S KYT+ ++ S G G+ +S GIL+++AS++
Sbjct: 147 KTLVSYPNELDPTRSVWKIHDFASNSWKYTNLVMSCSSGVTLFGASVSLNGILYWVASHL 206
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,366,293
Number of Sequences: 28952
Number of extensions: 272451
Number of successful extensions: 1013
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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