Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_G22
(642 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 396 e-110
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 388 e-108
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 388 e-108
SB_56| Best HMM Match : Actin (HMM E-Value=0) 387 e-108
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 357 6e-99
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 203 8e-53
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 2e-47
SB_54| Best HMM Match : Actin (HMM E-Value=0) 160 8e-40
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 144 5e-35
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 125 3e-29
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 106 2e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 60 2e-09
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 3e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 58 5e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 49 3e-06
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 1.1
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 1.4
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 1.8
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 2.4
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 29 3.2
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 29 3.2
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 4.2
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 5.6
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 7.4
SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6) 28 7.4
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 7.4
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 7.4
SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 27 9.8
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 396 bits (974), Expect = e-110
Identities = 183/187 (97%), Positives = 186/187 (99%)
Frame = +2
Query: 80 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 259
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 260 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 439
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 440 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 619
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 620 LAGRXLT 640
LAGR LT
Sbjct: 181 LAGRDLT 187
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 388 bits (956), Expect = e-108
Identities = 180/185 (97%), Positives = 184/185 (99%)
Frame = +2
Query: 86 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 265
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 266 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 445
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 446 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 625
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 626 GRXLT 640
GR LT
Sbjct: 182 GRDLT 186
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 388 bits (954), Expect = e-108
Identities = 179/187 (95%), Positives = 185/187 (98%)
Frame = +2
Query: 80 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 259
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 260 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 439
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 440 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 619
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Query: 620 LAGRXLT 640
LAGR LT
Sbjct: 181 LAGRDLT 187
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 387 bits (952), Expect = e-108
Identities = 179/185 (96%), Positives = 184/185 (99%)
Frame = +2
Query: 86 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 265
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 266 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 445
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 446 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 625
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 626 GRXLT 640
GR LT
Sbjct: 182 GRDLT 186
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 357 bits (877), Expect = 6e-99
Identities = 165/173 (95%), Positives = 170/173 (98%), Gaps = 2/173 (1%)
Frame = +2
Query: 80 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 259
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 260 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 439
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 440 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 592
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 203 bits (496), Expect = 8e-53
Identities = 93/184 (50%), Positives = 128/184 (69%), Gaps = 3/184 (1%)
Frame = +2
Query: 98 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 271
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 272 ILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 448
+L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 449 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 628
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AG
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAG 186
Query: 629 RXLT 640
R +T
Sbjct: 187 RDIT 190
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 186 bits (452), Expect = 2e-47
Identities = 84/89 (94%), Positives = 86/89 (96%)
Frame = +2
Query: 86 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 265
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 266 RGILTLKYPIEHGIITNWDDMEKIWHHTF 352
RGILTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 134 bits (323), Expect = 8e-32
Identities = 63/72 (87%), Positives = 68/72 (94%)
Frame = +2
Query: 425 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 604
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 605 ILRLDLAGRXLT 640
I+RLDLAGR LT
Sbjct: 138 IIRLDLAGRDLT 149
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 160 bits (389), Expect = 8e-40
Identities = 73/103 (70%), Positives = 86/103 (83%)
Frame = +2
Query: 332 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 511
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 512 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRXLT 640
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGR LT
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLT 2231
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +2
Query: 47 ASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 205
AS T+ F+ V +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2080 ASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 144 bits (349), Expect = 5e-35
Identities = 60/87 (68%), Positives = 80/87 (91%)
Frame = +2
Query: 380 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 559
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 560 SHTVPIYEGYALPHAILRLDLAGRXLT 640
SH+VPIYEG+A+PH+I+R D+AGR ++
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVS 212
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 125 bits (302), Expect = 3e-29
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +2
Query: 446 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 625
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 626 GRXLT 640
GR LT
Sbjct: 61 GRDLT 65
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 106 bits (254), Expect = 2e-23
Identities = 47/117 (40%), Positives = 77/117 (65%)
Frame = +2
Query: 290 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 469
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 470 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRXLT 640
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFIT 119
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 59.7 bits (138), Expect = 2e-09
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Frame = +2
Query: 8 PMTRSLAAVESIPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 187
P+T A IP + + ++ FK+ A+V+DNG G+ K GFAGD PR + P++V
Sbjct: 672 PITLCTAFATVIPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVV 730
Query: 188 GRPRHQGVMVG--MGQKD-SYVGDEAQSKRGILTL 283
G P+ +++G + KD GD A +K G++ L
Sbjct: 731 GNPQRFSMLIGDNVNVKDYKKYGDAAVAKSGVMHL 765
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +2
Query: 491 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRXLT 640
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLT 816
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +2
Query: 104 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 205
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 58.4 bits (135), Expect = 5e-09
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 8/181 (4%)
Frame = +2
Query: 95 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 274
+A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 275 LTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 448
L Y P + G + NWD ++IW +TF E + M +I
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEI 324
Query: 449 MFETFNSPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 610
+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 325 LFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVR 384
Query: 611 R 613
R
Sbjct: 385 R 385
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +2
Query: 218 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 397
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.34
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 527 TGIVLDSGDGVSHTVPI 577
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -3
Query: 202 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 86
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 8/60 (13%)
Frame = +2
Query: 485 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRXLT 640
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGR +T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 335 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 514
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 515 SGRTTGIV 538
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 111 STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 257
S P+ R TT+P P +PSWV + + W TW RP
Sbjct: 36 SPSKPSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 75 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 179
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 281 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 433
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 422 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 538
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 75 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 179
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -3
Query: 442 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 263
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 262 AL 257
++
Sbjct: 214 SV 215
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -1
Query: 627 PAKSRRRMAWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNM 448
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 447 IWVIFSLLALGLR 409
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 66 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 179
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 29.1 bits (62), Expect = 3.2
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -1
Query: 567 VWE--TPSPESSTIPVVRPE-------AYSESTAWMATYMAGELKVSNMIWVIFSLLALG 415
VWE T P + T+P + + Y S +W+ L N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 414 LRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMIPCSMGYFRVRIPLLLWAS 250
L A + T C T +L ++ ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 27 LP*SQYQRPQHKHTQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 179
LP + P T S C +L+R T+ APA P SPAT P R
Sbjct: 397 LPADRRSEPLSAKTIVSSCLAPLLVRPLETIPAPAPTTPTSPATPASGPPIR 448
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 610 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 512
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 425 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 574
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 410 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 538
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 60 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 185
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 60 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 185
K T ++ ATT + +T PA P P TT P ++ P+
Sbjct: 133 KPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 174
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 75 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 179
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 207 PWWRGRPTMDGKTARGASSPAKPALHMPEP 118
P W + G T R PAKP+L++P P
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 75 SRCATTMLLR-L*STMAPACARPVSPAT 155
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6)
Length = 188
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -1
Query: 576 MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELK-VSNMIWVIFSLLALGLRGAS 400
M + + PSP P+A+ + A Y +G LK S V + L+ G G
Sbjct: 1 MAELADLPSPRMDWSSTDLPQAFKKFRATCELYFSGPLKEKSEPDKVSYLLIWTGDEGIE 60
Query: 399 VSSTGCSSGATRSSL*KVW 343
+SST S L W
Sbjct: 61 LSSTWALSADDSKKLDTYW 79
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 75 SRCATTMLLR-L*STMAPACARPVSPAT 155
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 75 SRCATTMLLR-L*STMAPACARPVSPAT 155
S C T+L+R L +T APA P SPAT
Sbjct: 14 SSCLATLLVRPLETTPAPAPTTPTSPAT 41
>SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = -1
Query: 501 STAWMATYMAGELKVSNMIWV---IFSLLALGL 412
S AW+ + + EL+ S +WV IFS+L +G+
Sbjct: 163 SVAWLCSLLYLELEASLYVWVPSLIFSILIIGV 195
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 77 KMCDDDVAALVVDNG-SGMCKAGFAGD 154
++CD D + +N MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 201 WRGRPTMDGKTARGASSPAKPALHMPEP 118
W + G T R PAKPAL++P P
Sbjct: 72 WLQQVKDGGNTNRRTRIPAKPALNLPSP 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,624,688
Number of Sequences: 59808
Number of extensions: 442771
Number of successful extensions: 1680
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1676
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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