Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_G21
         (557 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.32 
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.32 
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    26   0.96 
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    26   0.96 
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            23   5.1  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            23   5.1  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            23   5.1  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            23   5.1  
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            23   6.8  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 27.5 bits (58), Expect = 0.32
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = -3

Query: 300 SGQSYELGEFQTTRFVGVDFLNKLLEDFLVEWLPHHSQDISHEVXRGYYP 151
           S Q++ +  +  T F+G DFL + L      ++ +H + +S ++   +YP
Sbjct: 334 SPQTHRMAPWVKTFFIGKDFLPRFLFMKRPPYIENHRKLLSKDLHACFYP 383


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 27.5 bits (58), Expect = 0.32
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = -3

Query: 300 SGQSYELGEFQTTRFVGVDFLNKLLEDFLVEWLPHHSQDISHEVXRGYYP 151
           S Q++ +  +  T F+G DFL + L      ++ +H + +S ++   +YP
Sbjct: 334 SPQTHRMAPWVKTFFIGKDFLPRFLFMKRPPYIENHRKLLSKDLHACFYP 383


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 25.8 bits (54), Expect = 0.96
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 516 HELVEVNSAASVSVDLLDEAIEFIVSQLLVQFPEDLAQA 400
           H + E+ +AA+VSV+++ EAI     +L  Q   +  QA
Sbjct: 274 HTVEELAAAANVSVEVIKEAIRVRQQELRAQKQYEKQQA 312


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 25.8 bits (54), Expect = 0.96
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = -3

Query: 516 HELVEVNSAASVSVDLLDEAIEFIVSQLLVQFPEDLAQA 400
           H + E+ +AA+VSV+++ EAI   V Q  ++ PE + +A
Sbjct: 281 HTVEELAAAANVSVEVIKEAIR--VRQQELRGPEAVREA 317


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 268 LEFPEFVTLAAKFIVEEDAE-AMQKELREAFRLYDKEGNGYIPTSSL 405
           ++ P  +T+  +F + + +  A +K +++ F    K G G  PTSS+
Sbjct: 54  IQEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTGTGVTPTSSI 100


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 268 LEFPEFVTLAAKFIVEEDAE-AMQKELREAFRLYDKEGNGYIPTSSL 405
           ++ P  +T+  +F + + +  A +K +++ F    K G G  PTSS+
Sbjct: 54  IQEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTGTGVTPTSSI 100


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 268 LEFPEFVTLAAKFIVEEDAE-AMQKELREAFRLYDKEGNGYIPTSSL 405
           ++ P  +T+  +F + + +  A +K +++ F    K G G  PTSS+
Sbjct: 54  IQEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTGTGVTPTSSI 100


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 268 LEFPEFVTLAAKFIVEEDAE-AMQKELREAFRLYDKEGNGYIPTSSL 405
           ++ P  +T+  +F + + +  A +K +++ F    K G G  PTSS+
Sbjct: 54  IQEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTGTGVTPTSSI 100


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 268 LEFPEFVTLAAKFIVEEDAE-AMQKELREAFRLYDKEGNGYIPTSSL 405
           ++ P  +T+  +F + + +  A +K +++ F    K G G  PTSS+
Sbjct: 54  IQEPRSLTIMHQFPLHKISYCADEKGVKKFFSFIAKTGTGATPTSSI 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,068
Number of Sequences: 2352
Number of extensions: 8471
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)