Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_G20
(635 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 279 4e-74
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 279 5e-74
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 277 1e-73
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 276 4e-73
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 270 1e-71
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 259 3e-68
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 250 3e-65
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 241 1e-62
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 239 5e-62
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 238 9e-62
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 231 8e-60
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 229 3e-59
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 228 1e-58
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 225 7e-58
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 224 1e-57
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 213 3e-54
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 210 2e-53
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 206 3e-52
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 206 3e-52
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 203 3e-51
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 187 2e-46
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 187 2e-46
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 181 1e-44
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 179 6e-44
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 174 2e-42
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 171 9e-42
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 169 5e-41
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 169 5e-41
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 163 2e-39
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 161 1e-38
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 160 3e-38
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 159 4e-38
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 156 5e-37
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 155 6e-37
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 152 8e-36
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 151 1e-35
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 151 1e-35
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 149 6e-35
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 147 2e-34
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 146 3e-34
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 145 7e-34
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 145 7e-34
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 144 2e-33
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 144 2e-33
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 143 4e-33
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 142 5e-33
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 141 1e-32
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 139 4e-32
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 139 4e-32
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 138 1e-31
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 137 2e-31
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 136 4e-31
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 135 1e-30
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 134 2e-30
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 134 2e-30
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 134 2e-30
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 134 2e-30
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 133 3e-30
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 132 7e-30
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 131 1e-29
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 131 2e-29
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 130 4e-29
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 129 5e-29
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 129 6e-29
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 128 1e-28
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 128 1e-28
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 127 3e-28
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 126 3e-28
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 126 3e-28
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 125 8e-28
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 124 2e-27
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 124 2e-27
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 124 2e-27
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 122 1e-26
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 122 1e-26
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 118 9e-26
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 118 2e-25
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 117 2e-25
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 113 3e-24
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 103 5e-21
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 101 2e-20
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 97 3e-19
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 96 7e-19
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 90 5e-17
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 87 4e-16
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 86 8e-16
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 85 1e-15
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 84 2e-15
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 82 9e-15
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 81 2e-14
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 77 4e-13
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 77 4e-13
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 74 3e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 73 4e-12
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 67 3e-10
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 62 8e-09
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 60 3e-08
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 60 4e-08
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 60 6e-08
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 57 4e-07
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 55 1e-06
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 2e-06
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 54 2e-06
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 52 2e-05
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 51 3e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 1e-04
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 48 1e-04
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 48 2e-04
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 46 6e-04
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 44 0.003
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 44 0.004
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 43 0.005
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 43 0.007
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 42 0.009
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 42 0.012
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 38 0.27
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 36 1.1
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 1.9
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 34 2.5
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 34 2.5
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 33 4.4
UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: Sak... 33 5.8
UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2; Crypto... 33 5.8
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 7.6
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 279 bits (684), Expect = 4e-74
Identities = 133/211 (63%), Positives = 158/211 (74%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+N+R N + D++ LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDP
Sbjct: 153 LNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDP 212
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
ILYQHLF FFGHPEVYILILPGFGIISH+I E GKKETF FIV
Sbjct: 213 ILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKETFGMLGMIYAMLTIGFLGFIVW 272
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
AHH+FT+G+D+DTRAYFTSAT+IIA+PTGIKIF +AT G ++ N IL +GF+FLF
Sbjct: 273 AHHMFTIGMDVDTRAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFLF 332
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
TVGGLTGV+L+NSS+D+ LHDTYY VAH HY
Sbjct: 333 TVGGLTGVVLSNSSVDVVLHDTYYGVAHFHY 363
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 279 bits (683), Expect = 5e-74
Identities = 134/211 (63%), Positives = 157/211 (74%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
IN++ +S Q PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDP
Sbjct: 169 INMKPPTISQYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDP 228
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
ILYQHLF FFGHPEVYILILPGFGIISH+++ GKKE F FIV
Sbjct: 229 ILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVW 288
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLF
Sbjct: 289 AHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLF 348
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
TVGGLTG++LANSS+DI LHDTYYVVAH HY
Sbjct: 349 TVGGLTGIVLANSSLDIVLHDTYYVVAHFHY 379
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 277 bits (680), Expect = 1e-73
Identities = 132/211 (62%), Positives = 159/211 (75%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
IN++ ++ Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDP
Sbjct: 169 INMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDP 228
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
ILYQHLF FFGHPEVYILILPGFG+ISHI++ GKKE F FIV
Sbjct: 229 ILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVW 288
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L LGF+FLF
Sbjct: 289 AHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLF 348
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
TVGGLTG++LANSS+DI LHDTYYVVAH HY
Sbjct: 349 TVGGLTGIVLANSSLDIVLHDTYYVVAHFHY 379
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 276 bits (676), Expect = 4e-73
Identities = 132/211 (62%), Positives = 157/211 (74%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
IN++ ++ Q PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDP
Sbjct: 169 INMKPPAITQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDP 228
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
ILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F FIV
Sbjct: 229 ILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIVW 288
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLF
Sbjct: 289 AHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLF 348
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
TVGGLTG++LANSSIDI LHDTYYVVAH HY
Sbjct: 349 TVGGLTGIVLANSSIDIVLHDTYYVVAHFHY 379
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 270 bits (663), Expect = 1e-71
Identities = 131/210 (62%), Positives = 155/210 (73%)
Frame = +1
Query: 4 NLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPI 183
N+R ++ +LPLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPI
Sbjct: 173 NMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPI 232
Query: 184 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 363
LYQHLF FFGHPEVYILILPGFGIISHI+S GK F F+V A
Sbjct: 233 LYQHLFWFFGHPEVYILILPGFGIISHIVSTFSGKP-VFGYLGMVYAMISIGVLGFLVWA 291
Query: 364 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 543
HH+FTVG+D+DTRAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L +GF+FLFT
Sbjct: 292 HHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFT 351
Query: 544 VGGLTGVILANSSIDITLHDTYYVVAHXHY 633
+GGLTG++LANS +DI LHDTYYVVAH HY
Sbjct: 352 IGGLTGIVLANSGLDIALHDTYYVVAHFHY 381
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 259 bits (635), Expect = 3e-68
Identities = 126/211 (59%), Positives = 154/211 (72%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+N+R S ++PLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDP
Sbjct: 177 LNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDP 236
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
ILYQHLF FFGHPEVYILILPGFG+ISHI+S +K F FIV
Sbjct: 237 ILYQHLFWFFGHPEVYILILPGFGMISHIVSTF-SRKPVFGYIGMVYAMVSIGVLGFIVW 295
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
AHH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF +ATI I+ +L +GF+FLF
Sbjct: 296 AHHMYTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLF 355
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
T+GGLTG++LANS +DI+LHDTYYVVAH HY
Sbjct: 356 TIGGLTGIVLANSGLDISLHDTYYVVAHFHY 386
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 250 bits (611), Expect = 3e-65
Identities = 122/210 (58%), Positives = 149/210 (70%)
Frame = +1
Query: 4 NLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPI 183
N+R + +L LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPI
Sbjct: 171 NMRSPGIRLHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPI 230
Query: 184 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 363
LYQHLF FFGHPEVYILI+PGFGIIS IS K F F+V +
Sbjct: 231 LYQHLFWFFGHPEVYILIIPGFGIISTTISAN-SNKSVFGYLGMVYAMCSIGILGFVVWS 289
Query: 364 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 543
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P++L LGFVF+FT
Sbjct: 290 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFT 349
Query: 544 VGGLTGVILANSSIDITLHDTYYVVAHXHY 633
+GGL+GV+LAN+S+DI HDTYYVVAH HY
Sbjct: 350 IGGLSGVVLANASLDIAFHDTYYVVAHFHY 379
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 241 bits (590), Expect = 1e-62
Identities = 116/204 (56%), Positives = 146/204 (71%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+N+R ++ +LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDP
Sbjct: 169 LNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDP 228
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
ILYQHLF FFGHPEVYILI+PGFG++SHI+S G K F F+V
Sbjct: 229 ILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSG-KPVFGYLGMVYAMFSIGILGFLVW 287
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
+HH++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT++G + +L LGF+ LF
Sbjct: 288 SHHMYAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALF 347
Query: 541 TVGGLTGVILANSSIDITLHDTYY 612
T+GGLTGVILAN+S+D+ LHD Y
Sbjct: 348 TIGGLTGVILANASLDVALHDLKY 371
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 239 bits (584), Expect = 5e-62
Identities = 118/211 (55%), Positives = 147/211 (69%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+N+R + +L LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD
Sbjct: 196 LNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDA 255
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
ILYQHLF FFGHPEVYILI+PGFGIIS +IS K F FIV
Sbjct: 256 ILYQHLFWFFGHPEVYILIIPGFGIISTVISAN-SNKNVFGYLGMVYAMMSIGLLGFIVW 314
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
+HH++TVG+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++ +L LGFV +F
Sbjct: 315 SHHMYTVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMF 374
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
T+GGL+GV+LAN+S +I HDTYYVVAH HY
Sbjct: 375 TIGGLSGVVLANASENIAFHDTYYVVAHFHY 405
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 238 bits (582), Expect = 9e-62
Identities = 114/211 (54%), Positives = 146/211 (69%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+N+R ++ ++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP
Sbjct: 212 LNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDP 271
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
LYQHLF FFGHPEVYI+ILPGFGIIS I+S +K F F+V
Sbjct: 272 ELYQHLFWFFGHPEVYIMILPGFGIISQIVSTF-SRKPVFGYLGMAYAMVAIGVVGFVVW 330
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
AHH+FT G+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++ ++ LGF+FLF
Sbjct: 331 AHHMFTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLF 390
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
TVGG+TGV+LAN +D LHDTYYVVAH HY
Sbjct: 391 TVGGVTGVVLANGGVDDVLHDTYYVVAHFHY 421
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 231 bits (566), Expect = 8e-60
Identities = 105/166 (63%), Positives = 128/166 (77%)
Frame = +1
Query: 136 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXX 315
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E F
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGM 250
Query: 316 XXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 495
F+V AHH+FTVG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ +
Sbjct: 251 VYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQ 310
Query: 496 YNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
+ + LGFVFLFT+GGLTG++LANSSID+ LHDTYYVVAH HY
Sbjct: 311 WETPLFWALGFVFLFTLGGLTGIVLANSSIDVVLHDTYYVVAHFHY 356
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 229 bits (561), Expect = 3e-59
Identities = 111/201 (55%), Positives = 139/201 (69%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+N+R N +S ++PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDP
Sbjct: 170 LNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDP 229
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
I YQH F FFGHPEVYILI+PGFGI+SHI+S KK F F+V
Sbjct: 230 IFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TYSKKPVFGEISMVYAMASIGLLGFLVW 288
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
+HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF LATI+G I ++ + F+FLF
Sbjct: 289 SHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLF 348
Query: 541 TVGGLTGVILANSSIDITLHD 603
TVGGLTGV+LAN+S+D+ HD
Sbjct: 349 TVGGLTGVVLANASLDVAFHD 369
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 228 bits (557), Expect = 1e-58
Identities = 113/208 (54%), Positives = 142/208 (68%), Gaps = 2/208 (0%)
Frame = +1
Query: 16 NHLSFDQ-LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 192
N F++ LPLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQ
Sbjct: 177 NEAMFNKDLPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQ 236
Query: 193 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHI 372
HLF FFGHPEVYILILPGFG++SHII+ KK F FIV AHH+
Sbjct: 237 HLFWFFGHPEVYILILPGFGLVSHIIA-TFSKKRVFGHVPMIAAMLMIGLIGFIVWAHHM 295
Query: 373 FTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNPNIL*RLGFVFLFTVG 549
+T GID T+AYFT+AT++IA+PTGIK+F +AT+ G I Y P GFV LFT+G
Sbjct: 296 YTSGIDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLFTIG 354
Query: 550 GLTGVILANSSIDITLHDTYYVVAHXHY 633
G+TG+IL+N+ ID ++HDT+YVV H HY
Sbjct: 355 GITGIILSNAGIDTSIHDTHYVVGHFHY 382
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 225 bits (550), Expect = 7e-58
Identities = 107/211 (50%), Positives = 144/211 (68%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+N+R ++ ++PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDP
Sbjct: 275 LNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDP 334
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
IL+QH+F FFGHPEVYI+ILP FG+ISHI++ KK F F+V
Sbjct: 335 ILFQHIFWFFGHPEVYIVILPAFGVISHIVA-TFSKKPIFGYLPMVYALVAIGGLGFVVW 393
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
AHH++TVG+ + +AYF AT++IAVPTGIKIF +AT+ I++ ++ LGF+FLF
Sbjct: 394 AHHMYTVGMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLF 453
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
T+GG TG+IL+ + +D HDTYYVVAH HY
Sbjct: 454 TLGGTTGIILSQAGVDRAYHDTYYVVAHFHY 484
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 224 bits (548), Expect = 1e-57
Identities = 108/207 (52%), Positives = 142/207 (68%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
IN+R N + + +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP
Sbjct: 187 INMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDP 246
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F F V
Sbjct: 247 LLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVW 305
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
+HH+FTVG+D D+RAYF+ A++IIA+PTG KIF LATI+G + + +L +GF+ LF
Sbjct: 306 SHHMFTVGLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLF 365
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVA 621
T+GG+TGV++ANSS+DI HDTYYVVA
Sbjct: 366 TIGGVTGVVIANSSLDIMFHDTYYVVA 392
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 213 bits (520), Expect = 3e-54
Identities = 106/214 (49%), Positives = 138/214 (64%), Gaps = 4/214 (1%)
Frame = +1
Query: 4 NLRXNHLSFDQL-PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
N+R L F L P+ + + T+ A +T+LL DR+ +TSF+ P GGGDP
Sbjct: 172 NMRMGALFFMSLNPMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDP 231
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
IL+QHLF FFGHPEVYILILP FG+ISHI+ + K F F+V
Sbjct: 232 ILWQHLFWFFGHPEVYILILPAFGVISHILCRSSAKLHVFGKIGMSWASMGIAWMGFLVW 291
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG---TQINYNPNIL*RLGFV 531
HH+F G+DIDTRAYFT+AT++IAVPTG+K+F LATI G + + +P+ +G V
Sbjct: 292 GHHMFVAGLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVV 351
Query: 532 FLFTVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
LFT+GGLTGVILAN+++ LHD+YYVVAH HY
Sbjct: 352 LLFTIGGLTGVILANAALSTLLHDSYYVVAHFHY 385
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 210 bits (513), Expect = 2e-53
Identities = 109/211 (51%), Positives = 127/211 (60%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
IN++ +S Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDP
Sbjct: 170 INMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDP 229
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
ILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F FIV
Sbjct: 230 ILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMLSIGFLGFIVW 289
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
A LAT+HG I ++P +L LGF+FLF
Sbjct: 290 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWLATLHGGTIKWDPPMLWALGFIFLF 349
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
TVGGLTG++LANSS+DI LHDTYYVVAH HY
Sbjct: 350 TVGGLTGIVLANSSLDIALHDTYYVVAHFHY 380
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 206 bits (503), Expect = 3e-52
Identities = 100/138 (72%), Positives = 109/138 (78%)
Frame = +1
Query: 220 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 399
EVYILILPGFG+ISHIISQE GKKE F F+V AHH+FTVG+D+DT
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDT 214
Query: 400 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 579
RAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L LGFVFLFTVGGLTGV+LANS
Sbjct: 215 RAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTVGGLTGVVLANS 274
Query: 580 SIDITLHDTYYVVAHXHY 633
SIDI LHDTYYVVAH HY
Sbjct: 275 SIDIVLHDTYYVVAHFHY 292
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 206 bits (503), Expect = 3e-52
Identities = 99/210 (47%), Positives = 130/210 (61%)
Frame = +1
Query: 4 NLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPI 183
N+R ++ DQ+ +FV +T+F AG++ LL DRN NTSF+D GG+P+
Sbjct: 180 NMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPL 239
Query: 184 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 363
LYQHLF FFGHPEVY++ILP FGIIS + K F V
Sbjct: 240 LYQHLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFGQTSMTFASIWIAVLGTSVWG 299
Query: 364 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 543
HH++T G+DIDTR YF++AT+IIA+P+ +KIF L T G+ P F+FLFT
Sbjct: 300 HHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFT 359
Query: 544 VGGLTGVILANSSIDITLHDTYYVVAHXHY 633
VGGL+G+IL+ +S+DI LHDTYYVVAH HY
Sbjct: 360 VGGLSGIILSAASLDIILHDTYYVVAHFHY 389
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 203 bits (495), Expect = 3e-51
Identities = 94/143 (65%), Positives = 111/143 (77%)
Frame = +1
Query: 205 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 384
FFGHPEVYILILPGFG+ISHI++ GKKE F FIV AHH+FTVG
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 385 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 564
+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L LGF+FLFTVGGLTG+
Sbjct: 62 MDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGGLTGI 121
Query: 565 ILANSSIDITLHDTYYVVAHXHY 633
ILANSS+DI LHDTYYVVAH HY
Sbjct: 122 ILANSSLDIVLHDTYYVVAHFHY 144
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 187 bits (456), Expect = 2e-46
Identities = 90/178 (50%), Positives = 117/178 (65%), Gaps = 1/178 (0%)
Frame = +1
Query: 103 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 282
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLS 352
Query: 283 GKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR 462
+F +V HH+F VG D T +F+S T+II VPTGIK+F
Sbjct: 353 NNDSSFGYYGLICAMASIVCLGSVVWGHHMFMVGFDSLTGVFFSSITMIIGVPTGIKVFS 412
Query: 463 *LATIHGTQIN-YNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
L ++ + +P + +GF+FLFTVGG+TGV L+ S++DI HDT++VVAH HY
Sbjct: 413 WLYMLNSCGMRVLDPIVWWLVGFIFLFTVGGVTGVALSASALDILFHDTWFVVAHFHY 470
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 187 bits (455), Expect = 2e-46
Identities = 94/212 (44%), Positives = 128/212 (60%), Gaps = 1/212 (0%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
++LR L+ L + ++ IT+ G + +LL+D + NT FFDP GDP
Sbjct: 175 MHLRAKGLTLGILSVSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDP 234
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
ILYQHLF FFGHPEVYILILP FG+ISH+IS + F +V
Sbjct: 235 ILYQHLFWFFGHPEVYILILPAFGVISHVISTNY-CRNLFGNQSMILAMGCIAVLGSLVW 293
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN-YNPNIL*RLGFVFL 537
HH++T G+++DTRAYFTS TI+I++PTG K+F + T + + + L L F+
Sbjct: 294 VHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICT 353
Query: 538 FTVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
FT GG TGVIL N++ID+ LHDTYYV+AH H+
Sbjct: 354 FTFGGTTGVILGNAAIDVALHDTYYVIAHFHF 385
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 181 bits (440), Expect = 1e-44
Identities = 89/169 (52%), Positives = 111/169 (65%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+N+R N ++ +LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDP
Sbjct: 170 LNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDP 229
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
ILY+HLF FFGHPEVYILI+PGFGIISH++S KK F F+V
Sbjct: 230 ILYEHLFWFFGHPEVYILIIPGFGIISHVVS-TYSKKPVFGEISMVYAMASIGLLGFLVW 288
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 507
+HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 289 SHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 179 bits (435), Expect = 6e-44
Identities = 89/208 (42%), Positives = 123/208 (59%)
Frame = +1
Query: 10 RXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 189
R SF LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+
Sbjct: 175 RRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILF 234
Query: 190 QHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHH 369
QH+F FFGHPEVYI++LP FG+IS I+ + G + F V AHH
Sbjct: 235 QHIFWFFGHPEVYIILLPVFGLISTIV-EVIGFRCVFSTVAMIYSMILIAILGMFVWAHH 293
Query: 370 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVG 549
+F VG+D+D+RAYF +I+I +PT +K+F + + T + + + F+F+F +G
Sbjct: 294 MFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIG 353
Query: 550 GLTGVILANSSIDITLHDTYYVVAHXHY 633
+TG+ L+N IDI LHDTY+VV H HY
Sbjct: 354 AVTGLFLSNVGIDIMLHDTYFVVGHFHY 381
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 174 bits (423), Expect = 2e-42
Identities = 89/199 (44%), Positives = 123/199 (61%), Gaps = 1/199 (0%)
Frame = +1
Query: 37 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 216
L LF ++ + + A IT++LTD++L T F+D GGDP+LYQHLF FFGH
Sbjct: 165 LSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGH 224
Query: 217 PEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDID 396
PEVY++ILP FG+ S I Q +V AHH++T G+DID
Sbjct: 225 PEVYVVILPVFGLFSSSI-QLSSLHRIPGELSLVLAMASIALIGSVVWAHHMYTAGLDID 283
Query: 397 TRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLFTVGGLTGVILA 573
TR+YFT+AT+IIAVPTGIKIF L++ + ++ N ++ F+ F +GG +G+IL+
Sbjct: 284 TRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIVSFAIGGTSGIILS 343
Query: 574 NSSIDITLHDTYYVVAHXH 630
N+S+D LHDTYYVVAH H
Sbjct: 344 NASVDHYLHDTYYVVAHFH 362
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 171 bits (417), Expect = 9e-42
Identities = 88/211 (41%), Positives = 119/211 (56%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+ +R + +PLF A+ T+ A A+ +L D TSFF+P GGGDP
Sbjct: 180 LKMRIKDMDLHSMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDP 239
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
++YQHLF F+ HP VYI+ILP FG+IS +I +K F IV
Sbjct: 240 VVYQHLFWFYSHPAVYIMILPFFGVISEVIPVH-ARKPIFGYRAIAYSSLAISFLGLIVW 298
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
AHH+FT G R +F + T++IAVPTGIKIF T+ G +I N +L GF+ F
Sbjct: 299 AHHMFTSGTPGWLRMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSF 358
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
+GGLTGV++A+ DI +HDTY+VV H HY
Sbjct: 359 MIGGLTGVMVASVPFDIHVHDTYFVVGHFHY 389
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 169 bits (411), Expect = 5e-41
Identities = 86/211 (40%), Positives = 122/211 (57%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
INLR +S ++PLFV + + A A+ +LL DR L ++FFDP GG
Sbjct: 188 INLRAPGMSLQRVPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSA 247
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
+L+QH F FGHPEVYILILPGFG+IS +I +K + + V
Sbjct: 248 VLWQHYFWIFGHPEVYILILPGFGMISEVIPVF-SRKPIYGYTFVAASSVAIVLLGYGVW 306
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
AHH+F VG+ + +F +++IA+PTGIK+F AT+ G +I +N ++ + F+ F
Sbjct: 307 AHHMFAVGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQF 366
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
+GGLTG++ A ID L DTY+VVAH HY
Sbjct: 367 VIGGLTGIMFAAVPIDWQLTDTYFVVAHFHY 397
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 169 bits (411), Expect = 5e-41
Identities = 88/211 (41%), Positives = 124/211 (58%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+N+R ++ +++PLFV + AF A LL DR+ T FF P GGD
Sbjct: 187 LNMRAPGMTLNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDA 246
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
+L+QHLF FFGHPEVYILILP GIIS ++ +K F F+V
Sbjct: 247 VLWQHLFWFFGHPEVYILILPTMGIISEVLPTF-SRKPIFGYAFVAYSGVAIGFLGFLVW 305
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
AHH+F VG+ A+F +A+ +IAVPTG+KIF LAT+ +N ++L +GF+ +F
Sbjct: 306 AHHMFAVGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMF 365
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
+GG++GV LA+ I++ D+YYVVAH HY
Sbjct: 366 IIGGISGVTLASPPINVQQTDSYYVVAHMHY 396
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 163 bits (397), Expect = 2e-39
Identities = 83/211 (39%), Positives = 118/211 (55%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
IN+R +++ +LPLF + + + +++ DR T+FF+P GG+
Sbjct: 178 INMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNT 237
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
++++HLF FGHPEVYILILP FGI S +I +K F F+V
Sbjct: 238 VIWEHLFWIFGHPEVYILILPAFGIFSEVIPVF-ARKRLFGYSSMVFAIVLIGFLGFMVW 296
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
HH+FT G+ A F AT+ IA+PTGIKIF L TI G + Y +L + F+ F
Sbjct: 297 VHHMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSF 356
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
+GG+TGV+LA ++ D HDTY+VVAH HY
Sbjct: 357 VLGGVTGVMLAAAAADYQFHDTYFVVAHFHY 387
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 161 bits (391), Expect = 1e-38
Identities = 82/208 (39%), Positives = 123/208 (59%)
Frame = +1
Query: 10 RXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 189
R +S D++PLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+
Sbjct: 188 RAPGMSLDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLW 247
Query: 190 QHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHH 369
QHLF FFGHPEVYI+ LP G++S I++ ++ F F + HH
Sbjct: 248 QHLFWFFGHPEVYIIFLPAVGMVSSIVATFT-QRPVFGYLAMVMALIATGVLAFGLWVHH 306
Query: 370 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVG 549
+F G+ ++FT++++ IAVP G++IF LATI + + L +GF+ +F +G
Sbjct: 307 MFVAGLPRLGESFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFVIG 366
Query: 550 GLTGVILANSSIDITLHDTYYVVAHXHY 633
GLTGV++A+ D +HDTY+VVAH HY
Sbjct: 367 GLTGVMVASVPFDTQVHDTYFVVAHFHY 394
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 160 bits (388), Expect = 3e-38
Identities = 90/220 (40%), Positives = 123/220 (55%), Gaps = 10/220 (4%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG 168
INLR +SF +LPL + A ITA A +L+ DR+L TSFF AG
Sbjct: 221 INLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAG 280
Query: 169 ------GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXX 330
GG P+L+QHLF F GHPEVYI+++P GI S +I+ +K F
Sbjct: 281 EALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGITSEVIATN-ARKPIFGYKAMIGSIL 339
Query: 331 XXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 510
FIV AHH+F G++ + F T+IIAVP+ +K F + T+ I + P +
Sbjct: 340 GIAVLSFIVWAHHMFVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAM 399
Query: 511 L*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXH 630
+ +G V +F GG+TG+IL N+++DI LHDTYYVVAH H
Sbjct: 400 MFSIGLVSMFISGGVTGIILGNNAMDIQLHDTYYVVAHFH 439
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 159 bits (387), Expect = 4e-38
Identities = 83/211 (39%), Positives = 118/211 (55%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+N+R ++ ++P+FV +T+ A+ +L+ DR +FF+ GG
Sbjct: 189 LNMRAPGMTLMKMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSV 248
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
+ YQHLF FGHPEVYILILP GIIS +I +K F F V
Sbjct: 249 VFYQHLFWTFGHPEVYILILPAMGIISEVIPVH-ARKMLFGYSVMVFSTALIGFMGFTVW 307
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
+HH+FTVG+ + F+ T+ IAVPTG+KIF L+T+ G QI + +L +GF+ F
Sbjct: 308 SHHMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASF 367
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
T+GGL+G + A + D HDTY+VVAH HY
Sbjct: 368 TIGGLSGFMHAAAPSDAQQHDTYFVVAHFHY 398
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 156 bits (378), Expect = 5e-37
Identities = 83/204 (40%), Positives = 121/204 (59%), Gaps = 1/204 (0%)
Frame = +1
Query: 22 LSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 201
L+F + ++ ++ +T+ AIT LL DRN+N++ +D G DP+LYQHLF
Sbjct: 188 LTFMNINIYNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLF 245
Query: 202 *FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTV 381
FFGHPEVY++ILP FG+ S I++ K+ F + V AHH+FTV
Sbjct: 246 WFFGHPEVYVIILPVFGLTSLILTSII-HKDIFGREGMMYCIISIGVVGYFVWAHHMFTV 304
Query: 382 GIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLFTVGGLT 558
G+DID+R+YF+ AT II++PT +K+F + T G N + F+ F GG T
Sbjct: 305 GLDIDSRSYFSIATSIISIPTSVKMFSYINTWASGRGFRGNNSSWSFFSFLICFCFGGFT 364
Query: 559 GVILANSSIDITLHDTYYVVAHXH 630
G++L++ S+DI LHDTY+VV H H
Sbjct: 365 GLLLSSGSLDIMLHDTYFVVGHFH 388
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 155 bits (377), Expect = 6e-37
Identities = 78/175 (44%), Positives = 108/175 (61%)
Frame = +1
Query: 109 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 288
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ + G+
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGR 318
Query: 289 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 468
K F F V AHH+FT GID R+ F + ++ I++P+ +K+F +
Sbjct: 319 K-LFGFKFVVYSTLAIGVLSFGVWAHHMFTTGIDPRIRSSFMAVSLAISIPSAVKVFNWI 377
Query: 469 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
T+ ++ +L +GFV F +GG+TGV LA ID+ LHDTYYVV H H+
Sbjct: 378 TTMWNGKLRLTAPMLFCIGFVQNFIIGGVTGVFLAVIPIDLILHDTYYVVGHFHF 432
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 152 bits (368), Expect = 8e-36
Identities = 80/175 (45%), Positives = 105/175 (60%)
Frame = +1
Query: 109 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 288
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G+
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGR 349
Query: 289 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 468
+ F F V AHH+F G+D RA F + ++ IAVP+ +K F +
Sbjct: 350 R-LFGFKFVVYSTLAIGVLSFGVWAHHMFATGLDPRLRASFMAVSLAIAVPSAVKTFNWI 408
Query: 469 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
T+ I +L +GFV F +GG+TGV LA+ +D+ LH TYYVV H HY
Sbjct: 409 TTMWNGNIRLTTPMLFSVGFVANFILGGVTGVFLASIPVDLVLHATYYVVGHFHY 463
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 151 bits (367), Expect = 1e-35
Identities = 79/211 (37%), Positives = 117/211 (55%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
I +R +F + LFV + AGA+T+L D+ L T+FF+PA GGDP
Sbjct: 125 ITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPAKGGDP 184
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
++YQ++F F+ HP VY+ +LP FG S II ++ F F +
Sbjct: 185 LIYQNIFWFYSHPVVYVQVLPVFGFYSEIIPVF-ARRPLFGYTSMVFAVWAITAVSFFLW 243
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
HH+F G+ TR F+ T++IAVPTGIKIF + T++ I++ +L LG VF+F
Sbjct: 244 IHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVFMF 303
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
+GGLTG+ L +ID+ + D+ +VV H HY
Sbjct: 304 LIGGLTGLPLGMVAIDLGVSDSLFVVGHFHY 334
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 151 bits (366), Expect = 1e-35
Identities = 75/182 (41%), Positives = 106/182 (58%), Gaps = 5/182 (2%)
Frame = +1
Query: 103 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 267
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEV 267
Query: 268 ISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 447
I Q ++ + F V HH+FT D R AT+ +A+P+G
Sbjct: 268 I-QRMARRRAYGYTAIAISSVAIASISFAVWMHHMFTAVQDFAPRVAMAIATMAVAIPSG 326
Query: 448 IKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHX 627
+K+F +AT++G +I +L L F+ F VGG+TGV ++D+ LHDTY+V+ H
Sbjct: 327 VKVFNWVATLYGGRIQLKAPMLFMLTFLLFFIVGGVTGVFFPVITLDLHLHDTYFVLGHF 386
Query: 628 HY 633
HY
Sbjct: 387 HY 388
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 149 bits (361), Expect = 6e-35
Identities = 80/222 (36%), Positives = 122/222 (54%), Gaps = 11/222 (4%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP------ 162
I +R ++ +LPL + A+ ITA A ++L DR + T FF P
Sbjct: 207 IQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVN 266
Query: 163 -----AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 327
AGGG P+L+QHLF F+ HP VYI+ILP G++S I++ +K F
Sbjct: 267 NSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILACF-SRKPIFGYKPMVYSI 325
Query: 328 XXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 507
FIV HH+F G++ F AT++IA+P+ +K F L T++G ++ +
Sbjct: 326 CGIAGLGFIVWGHHMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQFTTP 385
Query: 508 IL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
+L L FV +F +GGL+G+ +A + +DI +HDTY++VAH HY
Sbjct: 386 MLFALSFVSMFVIGGLSGIFMAATPVDIVIHDTYFIVAHFHY 427
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 147 bits (356), Expect = 2e-34
Identities = 75/210 (35%), Positives = 114/210 (54%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
I +R + +P+F GA+ +L DR L+ FF GG+
Sbjct: 214 IKMRAPGMKLMDMPIFTWTCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNA 273
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
++Y +LF +GHPEVYIL+LP FGI S ++S GK+ F F+V
Sbjct: 274 MMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR-LFGHKSMIYASGAISVLGFMVW 332
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
HH FT+G + A+F AT+II++PTG+K+F L TI+ ++ + IL LGF+ F
Sbjct: 333 LHHFFTMGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLGFMVTF 392
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXH 630
++GG+TGV+LA D LH++ +++AH H
Sbjct: 393 SIGGMTGVLLAVPGADYVLHNSLFLIAHFH 422
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 146 bits (355), Expect = 3e-34
Identities = 78/211 (36%), Positives = 108/211 (51%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
I +R + F ++P+FV G +LL D + TSFF P GGGDP
Sbjct: 195 IRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDP 254
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
+L+QH F F+ HP VY+L+LP FGI S + +K F IV
Sbjct: 255 VLFQHFFWFYSHPAVYVLVLPVFGIFSELFPVY-ARKPLFGYRFVAIASFGITFLSLIVW 313
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
AHH+F G R F T++IA+PTG+K+F L T+ + N +L +G + F
Sbjct: 314 AHHMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINF 373
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
G+TGV+LA IDI + +TY+VVAH HY
Sbjct: 374 IFAGITGVMLATVPIDIHVGNTYFVVAHFHY 404
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 145 bits (352), Expect = 7e-34
Identities = 74/211 (35%), Positives = 115/211 (54%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+ +R ++ ++P+F IT A+ +L DR FF GG P
Sbjct: 209 LKMRTKGMTLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMP 268
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
+L+ +LF +GHPEVYI+ILP FGI S IIS +K+ F F+V
Sbjct: 269 MLWANLFWIWGHPEVYIVILPAFGIFSEIISSF-ARKQLFGYKAMVGSIIAISVLSFLVW 327
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
HH FT+G ++F+ T+ I++PTG+KIF L T++ +I++ +L L F+ F
Sbjct: 328 THHFFTMGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPNF 387
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
+GG+TGV+LA ++ D H+TY++V+H HY
Sbjct: 388 VIGGVTGVMLAMAAADYQYHNTYFLVSHFHY 418
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 145 bits (352), Expect = 7e-34
Identities = 73/209 (34%), Positives = 116/209 (55%)
Frame = +1
Query: 4 NLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPI 183
NLR +S ++P++V +V + A ++L +R + S+F+PA GGDP+
Sbjct: 180 NLRAQGMSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPV 239
Query: 184 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 363
L+Q F F+ HP VY+++LP GI++ + S +K F +V A
Sbjct: 240 LFQQFFWFYSHPTVYVMLLPYLGILAEVASTF-ARKPLFGYRQMVWAQMGIVVLGTMVWA 298
Query: 364 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 543
HH+FTVG + F T +IAVPTG+K+F + T+ G ++ + LGF+F F
Sbjct: 299 HHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFL 358
Query: 544 VGGLTGVILANSSIDITLHDTYYVVAHXH 630
+GG+TGV+L+ + +D HD+Y+VVAH H
Sbjct: 359 LGGITGVMLSMTPLDYQFHDSYFVVAHFH 387
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 144 bits (349), Expect = 2e-33
Identities = 77/204 (37%), Positives = 117/204 (57%)
Frame = +1
Query: 22 LSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 201
+S +++P+FV AV + +F A +L DR FF A GDPIL+QHLF
Sbjct: 199 MSLNRMPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLF 257
Query: 202 *FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTV 381
FFGHPEVYI+ +P G++S II ++ F F + HH+FT
Sbjct: 258 WFFGHPEVYIIFIPALGMVSSIIITFT-QRPIFGYIPIVLSIVAIGFIGFGLWVHHMFTA 316
Query: 382 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 561
G+ +FT+++ +IA+P+G++IF +AT+ G++ +L LGF +F +GGL+G
Sbjct: 317 GLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFIIGGLSG 376
Query: 562 VILANSSIDITLHDTYYVVAHXHY 633
V++A+ D+ HDTY+VVAH HY
Sbjct: 377 VMVASVPFDMQAHDTYFVVAHFHY 400
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 144 bits (349), Expect = 2e-33
Identities = 77/207 (37%), Positives = 118/207 (57%), Gaps = 3/207 (1%)
Frame = +1
Query: 22 LSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 201
+S ++P+F A+ I A A +L +R+ FF GGDP+L+QHLF
Sbjct: 202 MSLTRMPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLF 261
Query: 202 *FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTV 381
FFGHPEVYI+ LP G++S I+ + F + HH+FT
Sbjct: 262 WFFGHPEVYIIFLPAAGLVSMIV-PTMARHPLVGYRLIVVALIGTGFFSFGLWVHHMFTT 320
Query: 382 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY---NPNIL*RLGFVFLFTVGG 552
GI + +F++A++ +A+P+GI++F +ATI ++ + P++ LGF+F+FTVGG
Sbjct: 321 GIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLFIFTVGG 379
Query: 553 LTGVILANSSIDITLHDTYYVVAHXHY 633
+TGV++A ID +HDTY+VVAH HY
Sbjct: 380 VTGVMVALVPIDFQVHDTYFVVAHFHY 406
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 143 bits (346), Expect = 4e-33
Identities = 66/83 (79%), Positives = 75/83 (90%)
Frame = +1
Query: 385 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 564
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 565 ILANSSIDITLHDTYYVVAHXHY 633
+LANSS+DI LHDTYYVVAH HY
Sbjct: 61 VLANSSLDIVLHDTYYVVAHFHY 83
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 142 bits (345), Expect = 5e-33
Identities = 83/221 (37%), Positives = 116/221 (52%), Gaps = 11/221 (4%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AV-GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA---- 165
+ R ++ +LPL V + T G++ +LL DR L TSFF P
Sbjct: 199 LQARTRGMTLMRLPLTVWGIFTATVMALLAFPALFVGSVMLLL-DRLLGTSFFMPTLVEM 257
Query: 166 ------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 327
GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +IS +K F
Sbjct: 258 GQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDLISTH-ARKNIFGYRMMVWAI 316
Query: 328 XXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 507
F+V AHH++ G+ +F + T+IIA+PT IK++ + T+ I+
Sbjct: 317 VAIGALSFVVWAHHMYVSGMYPYFGFFFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVP 376
Query: 508 IL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXH 630
+L LGF+ F GGLTG+ L N +D+ L DT +VVAH H
Sbjct: 377 MLFALGFIITFVNGGLTGLFLGNVVVDVPLSDTMFVVAHFH 417
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 141 bits (341), Expect = 1e-32
Identities = 68/174 (39%), Positives = 101/174 (58%)
Frame = +1
Query: 109 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 288
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S GK
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGK 308
Query: 289 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 468
+ F F V HH FT+G +F AT++I++PTG+K+F L
Sbjct: 309 R-LFGHHSMIYASGAIAVLGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWL 367
Query: 469 ATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXH 630
TI+ ++ + I+ LGF+ F++GG+TGV+LA D LH++ +V+AH H
Sbjct: 368 FTIYQGRLRFTAPIMWTLGFMITFSIGGMTGVLLAVPGADFVLHNSLFVIAHFH 421
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 139 bits (337), Expect = 4e-32
Identities = 71/210 (33%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Frame = +1
Query: 7 LRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPI 183
+R +++ ++PLFV A+ T+ G + +L+T NL FDPA GGDP+
Sbjct: 197 MRAPGITWFKMPLFVWAIYATSCIQVLATPVI-GLLLVLVTVENLFGFGMFDPARGGDPV 255
Query: 184 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 363
L+QHLF F+ HP VYI++LP FG++S +++ +K F F
Sbjct: 256 LFQHLFWFYSHPAVYIMVLPSFGVMSEVVA-TYSRKNIFGYRAVAYSSLGIAFVGFFAWG 314
Query: 364 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 543
HH+F G F T+I+ V T IK+F + T++ + + GF+F
Sbjct: 315 HHMFVSGQSTFAGGLFGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTV 374
Query: 544 VGGLTGVILANSSIDITLHDTYYVVAHXHY 633
GG+TG+ L S+D+ HDTY+VVAH H+
Sbjct: 375 FGGMTGIALGTVSLDVAWHDTYFVVAHFHF 404
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 139 bits (337), Expect = 4e-32
Identities = 75/194 (38%), Positives = 103/194 (53%), Gaps = 1/194 (0%)
Frame = +1
Query: 55 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 234
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIM 252
Query: 235 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 414
ILPGFGIIS ++S KE F + YFT
Sbjct: 253 ILPGFGIISLLLSTYT-TKEMFGNQTMILAMGFNSFVRLFGLGTSYVHIRFGSRYSRYFT 311
Query: 415 SATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDI 591
+ TI+IA+PTG KIF + T+ + I +L + F+ F +GG TGV+L N+ ID+
Sbjct: 312 TVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNAGIDL 371
Query: 592 TLHDTYYVVAHXHY 633
LHDT YVV H H+
Sbjct: 372 ALHDTVYVVGHFHF 385
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 138 bits (334), Expect = 1e-31
Identities = 77/222 (34%), Positives = 118/222 (53%), Gaps = 11/222 (4%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG---- 168
IN+R ++F +LP+ + + ITA + + DR T FF P+G
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVIN 269
Query: 169 -------GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 327
GG P+L+QHLF F+ HP VYI++LP G++S ++S +K F
Sbjct: 270 NAAPTVGGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSM 328
Query: 328 XXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 507
FIV HH+FT G++ F +T++IA+P+ IK F ATI G ++ +N
Sbjct: 329 SAIASLGFIVWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTV 388
Query: 508 IL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
L + F+ +F VGGL+G+ +A +D+ HDTY++VAH HY
Sbjct: 389 TLNCIAFLSMFIVGGLSGIFMAAVPVDVYFHDTYFIVAHFHY 430
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 137 bits (331), Expect = 2e-31
Identities = 73/208 (35%), Positives = 115/208 (55%)
Frame = +1
Query: 10 RXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 189
R +S ++P+ + + TAF +L +R L FFD GGDP+L+
Sbjct: 214 RAPGMSLTKMPILMWYLLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLW 273
Query: 190 QHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHH 369
QHLF FGHPEVYI+ LP G+++ ++ G K F F + AHH
Sbjct: 274 QHLFWLFGHPEVYIIFLPAAGMVATMLPTFVG-KPLFGYGFAVAAVVTMSFLSFGLWAHH 332
Query: 370 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVG 549
+F G+ I + + F++A+ ++AVPTG++IF +AT+ + + LGF+F+F +G
Sbjct: 333 MFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFVLG 392
Query: 550 GLTGVILANSSIDITLHDTYYVVAHXHY 633
G+TGV++A ++ HD+Y+VVAH HY
Sbjct: 393 GMTGVMVAAVPFNLQAHDSYFVVAHLHY 420
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 136 bits (329), Expect = 4e-31
Identities = 73/210 (34%), Positives = 112/210 (53%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+ LR +++ +LP V T A+ +L DR L T FF GG+
Sbjct: 232 VKLRAPGMTWSRLPFVVWTSLTTNIIALTAFPILGVALAMLGADRYLGTHFFTAGLGGNL 291
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
+LY +LF +GHPEVY ++LP FG IS II +K F + V
Sbjct: 292 MLYTNLFWIWGHPEVYFVVLPAFGFISEIIPTF-AEKPLFGYATMVIATFAIGGISWGVW 350
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
HH FT+G +F++AT+++ +PTG+K+F T+ ++ + P +L LG +FL
Sbjct: 351 LHHFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALFLL 410
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXH 630
VGGLTG++LA +I+ T+H++ +VVAH H
Sbjct: 411 LVGGLTGMMLAIPAINYTVHNSVFVVAHFH 440
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 135 bits (326), Expect = 1e-30
Identities = 75/216 (34%), Positives = 113/216 (52%), Gaps = 5/216 (2%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA----- 165
I LR +++ +LPL + + +TA A +LL DR+ T FF
Sbjct: 202 IRLRAPGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVR 261
Query: 166 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXX 345
GGGDPIL+QHLF FGHPEVYI+ILP +GI+ ++S K +
Sbjct: 262 GGGDPILWQHLFWIFGHPEVYIMILPAWGILGDVLSFFARKPHHWYRGTVWAMVLVTVLS 321
Query: 346 XFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLG 525
+ HH+F G+ F T++I++P+ + + + T+ + Y+ +L LG
Sbjct: 322 AMVY-GHHMFMTGMSPLLGEGFMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFALG 380
Query: 526 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
VF+F VGGLTG+ L + S+D+ LHDT +VV H H+
Sbjct: 381 TVFVFGVGGLTGLFLGDISMDLYLHDTMFVVGHFHF 416
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 134 bits (324), Expect = 2e-30
Identities = 63/97 (64%), Positives = 79/97 (81%), Gaps = 2/97 (2%)
Frame = +1
Query: 349 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN--YNPNIL*RL 522
FIV A H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N + + L
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWAL 309
Query: 523 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
GF+FLFT+GGLTG++L+NSS+DI LHDTYYVVAH HY
Sbjct: 310 GFIFLFTIGGLTGIVLSNSSLDILLHDTYYVVAHFHY 346
Score = 87.8 bits (208), Expect = 2e-16
Identities = 42/71 (59%), Positives = 51/71 (71%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+N+R ++ ++PLFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDP
Sbjct: 170 MNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDP 229
Query: 181 ILYQHLF*FFG 213
ILYQHLF FFG
Sbjct: 230 ILYQHLFWFFG 240
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 134 bits (323), Expect = 2e-30
Identities = 72/211 (34%), Positives = 110/211 (52%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+ +R + +S D+LP+ V + + A +L DRN T FFD A GG P
Sbjct: 205 LRMRAHGMSIDRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRP 264
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
+L+QHLF F HP VY+++LP GI+S + ++ F V
Sbjct: 265 LLWQHLFWMFAHPWVYVVVLPAMGIVSDALPTFC-RRPLVAYEAVAVSTVATMLIGFEVW 323
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
HH+F GI A+F +A+++I++P+ + +F +ATI + + L GFV +F
Sbjct: 324 VHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMF 383
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
VGG++GV+ A +D L DTY+VVAH HY
Sbjct: 384 VVGGVSGVMTAAVPLDWQLTDTYFVVAHLHY 414
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 134 bits (323), Expect = 2e-30
Identities = 66/198 (33%), Positives = 110/198 (55%)
Frame = +1
Query: 37 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 216
+P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGH
Sbjct: 342 MPFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGH 401
Query: 217 PEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDID 396
PEVY+LI+P FG I+ I+ ++ ++V HH++ VG+D
Sbjct: 402 PEVYVLIIPTFGFINMIVPHNNTRR-VASKHHMIWAIYVMAYMGYLVWGHHMYLVGLDHR 460
Query: 397 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 576
+R +++ TI+I++P IK+ ++ + + L + F+ LF V G TG+ L++
Sbjct: 461 SRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFLVAGFTGMWLSH 520
Query: 577 SSIDITLHDTYYVVAHXH 630
S+++++HDT+YVVAH H
Sbjct: 521 VSLNVSMHDTFYVVAHFH 538
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 134 bits (323), Expect = 2e-30
Identities = 73/209 (34%), Positives = 110/209 (52%)
Frame = +1
Query: 7 LRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIL 186
LR ++ ++P+F + + + A +L DR L +DPA GG +L
Sbjct: 197 LRAPGMTMFRMPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LL 255
Query: 187 YQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AH 366
+QHLF FFGHPEVY+L LP FGI+S II +K F V AH
Sbjct: 256 WQHLFWFFGHPEVYVLALPFFGIVSEIIPVF-SRKPMFGYVGLIFATLSIGALSMAVWAH 314
Query: 367 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 546
H+F G + +F+ T +I+VPTG+K F + T+ I + ++ +GF+ F
Sbjct: 315 HMFVTGAVL--LPFFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPMIWSVGFMATFLF 372
Query: 547 GGLTGVILANSSIDITLHDTYYVVAHXHY 633
GGLTG++LA+ +D L D+Y+++AH HY
Sbjct: 373 GGLTGIMLASPPLDFHLADSYFLIAHFHY 401
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 133 bits (322), Expect = 3e-30
Identities = 69/201 (34%), Positives = 104/201 (51%), Gaps = 1/201 (0%)
Frame = +1
Query: 34 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 213
++PLFV TA + +R T FFD A GG P+L+Q LF FFG
Sbjct: 178 KMPLFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFG 237
Query: 214 HPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI-V*AHHIFTVGID 390
HPEVYILILP G++S ++ + ++E F + V HH+FT +
Sbjct: 238 HPEVYILILPAMGLVSELLPK-MARREIFGYTAIALSSIAIAFLSALGVWMHHMFTAIDN 296
Query: 391 IDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVIL 570
+ ++ T+ IA+P+G+K+ AT++G +I Y + + F+ +F +GG+TGV
Sbjct: 297 TLVQIVSSATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFLLGGITGVFF 356
Query: 571 ANSSIDITLHDTYYVVAHXHY 633
ID L+ TY+VV H HY
Sbjct: 357 PLVPIDYALNGTYFVVGHFHY 377
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 132 bits (319), Expect = 7e-30
Identities = 76/221 (34%), Positives = 112/221 (50%), Gaps = 11/221 (4%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG---- 168
++LR +S ++P+ A IT+ A +L DR TSFF P+G
Sbjct: 206 LDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAGTSFFIPSGLVFN 265
Query: 169 -------GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 327
GG +L+QHLF FFGHPEVYI ILP GI+SHI+ ++
Sbjct: 266 DHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSHILINSM-RRPLLSHRVVIGSM 324
Query: 328 XXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 507
++V HH+F G++ + F+ T+II +P + L +++G+++ N
Sbjct: 325 ISIGFLSYVVWGHHMFVSGMNPLSSLVFSFPTLIITIPATVLTLIWLGSLYGSRLRINSA 384
Query: 508 IL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXH 630
L LGF+ +F GG++G LA SIDI LH TY+VV H H
Sbjct: 385 SLFALGFISMFVSGGVSGFFLAQPSIDIYLHATYFVVGHFH 425
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 131 bits (317), Expect = 1e-29
Identities = 64/209 (30%), Positives = 102/209 (48%)
Frame = +1
Query: 7 LRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIL 186
+R + + +LPLFV ++ T+ ++ ++ + FDPA GGDP+L
Sbjct: 190 MRAPGMGWTRLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVL 249
Query: 187 YQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AH 366
+QH F F+ HP VYI++LP +IS ++ +K F F H
Sbjct: 250 FQHFFWFYSHPAVYIMVLPAMAVISEVVCAF-SRKNIFGYKAVAYSSLGIAFVGFFTWGH 308
Query: 367 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTV 546
H+FT G F ++ + + T IK+F AT++ I + GF+F
Sbjct: 309 HMFTSGQSAFNGGVFGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLVF 368
Query: 547 GGLTGVILANSSIDITLHDTYYVVAHXHY 633
GG+TG+ LA S+D+ HDTY++VAH H+
Sbjct: 369 GGMTGIALATVSLDVHWHDTYFIVAHFHF 397
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 131 bits (316), Expect = 2e-29
Identities = 65/134 (48%), Positives = 83/134 (61%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
IN+R N + + +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP
Sbjct: 187 INMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDP 246
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F F V
Sbjct: 247 LLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVW 305
Query: 361 AHHIFTVGIDIDTR 402
+HH+FTVG+D D R
Sbjct: 306 SHHMFTVGLDADKR 319
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 130 bits (313), Expect = 4e-29
Identities = 71/198 (35%), Positives = 104/198 (52%)
Frame = +1
Query: 37 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 216
+PLF TA L DR L+ FF GG+ + + ++F FGH
Sbjct: 245 MPLFTWTALCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGH 304
Query: 217 PEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDID 396
PEVYILILP FG+ S I S GK F F+V HH FT+G
Sbjct: 305 PEVYILILPAFGVYSEIFSTFSGKV-LFGYKSLVWATISIAFLSFLVWLHHFFTMGQSGH 363
Query: 397 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 576
A F A+++I +PTG+KI+ + T+ +I ++ ++ L F+FLF +GG+TG++LAN
Sbjct: 364 INAVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFVIGGITGIMLAN 423
Query: 577 SSIDITLHDTYYVVAHXH 630
+D +H+T ++VAH H
Sbjct: 424 PILDYQVHNTVFLVAHFH 441
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 129 bits (312), Expect = 5e-29
Identities = 99/211 (46%), Positives = 111/211 (52%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+N+R + ++ ++PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDP
Sbjct: 88 LNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDP 147
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
ILYQHLF F GH
Sbjct: 148 ILYQHLFWFXGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 207
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
Y SA P G+K F + + G P I F
Sbjct: 208 XXXXXXXXXXXXXXXYLXSAXXFXXGPPGVK-FLGDSYLSGNFNFXKPQIFMIFSIYFSI 266
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
GGLTGVILANSS DI LHDTYYVVAH HY
Sbjct: 267 HGGGLTGVILANSSXDIILHDTYYVVAHXHY 297
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 129 bits (311), Expect = 6e-29
Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 1/210 (0%)
Frame = +1
Query: 7 LRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGGGDPI 183
+R + + ++P+F ++ T +LL DRNL T FF +PAGG +
Sbjct: 180 MRAPGIGWFKMPMFTWSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--L 237
Query: 184 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 363
L+ HLF FFGHPEVYIL+ P G ++ +IS GK + F+V
Sbjct: 238 LWDHLFWFFGHPEVYILLFPALGAMADVISTFSGKP-IYAKRYILTAFLIATIISFVVWM 296
Query: 364 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 543
HH+F G +I TR +++ TI+I++P + + + T++ ++ Y +L +G + F
Sbjct: 297 HHMFITGTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFAVGALLNFI 356
Query: 544 VGGLTGVILANSSIDITLHDTYYVVAHXHY 633
+GG TGV L + +ID TY+VVAH HY
Sbjct: 357 IGGSTGVYLGSIAIDRGFRGTYWVVAHFHY 386
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 128 bits (309), Expect = 1e-28
Identities = 56/81 (69%), Positives = 62/81 (76%)
Frame = +3
Query: 135 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRN 314
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 315 NLCYTSNWVIRIHCLSSSYIH 377
NLCY SNW+I I+CLSSSYI+
Sbjct: 67 NLCYISNWIISIYCLSSSYIY 87
Score = 95.1 bits (226), Expect = 1e-18
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +1
Query: 406 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 567
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P+IL LGFVFLFTVGGLTGVI
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 128 bits (308), Expect = 1e-28
Identities = 60/79 (75%), Positives = 65/79 (82%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
IN+R N +SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDP
Sbjct: 142 INMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDP 201
Query: 181 ILYQHLF*FFGHPEVYILI 237
ILYQHLF FFGHPEVYILI
Sbjct: 202 ILYQHLFWFFGHPEVYILI 220
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 127 bits (306), Expect = 3e-28
Identities = 70/210 (33%), Positives = 104/210 (49%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+NLR + ++P+F ++ T+ A + + L S F+P GG P
Sbjct: 187 VNLRAPGMGLWKMPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVP 246
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
+LYQ F F+ HP VY+++LP GI + + S +K F IV
Sbjct: 247 VLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS-TMARKPLFGYRVMVYSMLAIVLVSCIVW 305
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
HH+F VGI + F +T+I+AVPTG+KIF + T+ G +I +GF+F F
Sbjct: 306 LHHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNF 365
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXH 630
+GG+TGV L D + +YYVVAH H
Sbjct: 366 LIGGITGVSLGMIPFDYQVTMSYYVVAHFH 395
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 126 bits (305), Expect = 3e-28
Identities = 71/215 (33%), Positives = 113/215 (52%), Gaps = 4/215 (1%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+ R ++ ++P+F A+ + A A +L +R + FF GGDP
Sbjct: 254 LRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDP 313
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
+L+QHLF FFGHPEVYI+ LP G++S I+ + F +
Sbjct: 314 LLWQHLFWFFGHPEVYIIFLPAAGMVSMIV-PTMARTPLVGYRFVVLALVGTAFLSFGLW 372
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGT---QINYNPNIL*RLGF 528
HH+FT GI + ++F +A+ +A+P+G+++F +AT G ++ L LGF
Sbjct: 373 VHHMFTTGIPQLSLSFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGF 432
Query: 529 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
+F+F +GGLTGV++A D HD+Y++VAH HY
Sbjct: 433 LFIFVLGGLTGVMVAVIPFDWQAHDSYFIVAHLHY 467
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 126 bits (305), Expect = 3e-28
Identities = 69/210 (32%), Positives = 110/210 (52%), Gaps = 1/210 (0%)
Frame = +1
Query: 7 LRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPI 183
+R + +++L +FV A + AF G A+T+L D+ + T FFD A GGD +
Sbjct: 171 MRAPGIGWNKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDAL 229
Query: 184 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 363
YQ+LF F+ HP VY++ LP ++ I++ + V
Sbjct: 230 TYQNLFWFYSHPAVYVIFLPFMAMVFEIVATFARNRVFNYKMVVYGGIGGIVLLSGEVWI 289
Query: 364 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 543
HH++ G+ R T++I++P G+ + + T++G I++ +L LGF+FLF
Sbjct: 290 HHLYVTGMPDWLRVGQMVTTVLISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFL 349
Query: 544 VGGLTGVILANSSIDITLHDTYYVVAHXHY 633
+GGLTGV LA S+ + L +TYYVV H HY
Sbjct: 350 IGGLTGVPLALVSLTVHLSETYYVVGHFHY 379
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 125 bits (302), Expect = 8e-28
Identities = 58/85 (68%), Positives = 69/85 (81%)
Frame = +1
Query: 379 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 558
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 559 GVILANSSIDITLHDTYYVVAHXHY 633
G++LANSS+DI LHDTYYVVAH HY
Sbjct: 356 GIVLANSSLDIALHDTYYVVAHFHY 380
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 124 bits (298), Expect = 2e-27
Identities = 68/210 (32%), Positives = 108/210 (51%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+ LR L F+++ +F+ + + + DR L+T F+ GG
Sbjct: 208 LKLRKKKLFFNKISIFMWTCLCSNILILISFPILTILLFQIFLDRTLSTHFYSSFYGGQQ 267
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
+LY +L +GHPEVYILILP FGI S IIS K F F+V
Sbjct: 268 MLYINLIWAWGHPEVYILILPSFGIFSEIISY-ICVKSVFSYISLIYATISITVLSFLVW 326
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
HH FT+G + +F+ +T+IIA+PTG+KIF + TI + + + F+ +F
Sbjct: 327 LHHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWFISFIIIF 386
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXH 630
++GG +GVIL+ ++D H++ +++AH H
Sbjct: 387 SIGGFSGVILSIPNLDFIFHNSMFLIAHFH 416
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 124 bits (298), Expect = 2e-27
Identities = 61/168 (36%), Positives = 96/168 (57%)
Frame = +1
Query: 130 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 309
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+ ++
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIVPTA-ARQPIVGYS 312
Query: 310 XXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ 489
F + HH+FT G+ + +F++A+ + +PTGI++F +AT+ +
Sbjct: 313 WIVLSAVGTGFLSFGLWVHHMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGR 372
Query: 490 INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
+ +L G + +FT GGLTGV++A + D +HDTY++VAH HY
Sbjct: 373 VKMILPMLWIAGGLAVFTAGGLTGVMVAIAPFDWQVHDTYFIVAHLHY 420
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 124 bits (298), Expect = 2e-27
Identities = 70/211 (33%), Positives = 105/211 (49%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+ R +S ++P+F +TA +L +R + FF A GGD
Sbjct: 185 LRYRAPGMSLSKMPIFAWYALVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDA 244
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
+L+QHLF FGHPEVYI+ LP G IS I+ + F +
Sbjct: 245 LLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTGLLGYGWIVAAAVALGVLSFGLW 303
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
HH+FT GI A+F++A+ ++AVPT +++F + T+ + +L L F F
Sbjct: 304 VHHMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATF 363
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
+GGLTGV++A D +HDTY++VAH HY
Sbjct: 364 VIGGLTGVMVAIVPFDWQVHDTYFIVAHLHY 394
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 122 bits (293), Expect = 1e-26
Identities = 72/212 (33%), Positives = 107/212 (50%), Gaps = 1/212 (0%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+ R +S D++P++ +TA +L +R FF A GGD
Sbjct: 185 LRFRAPGMSLDRMPIYGWYALVTATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDS 244
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
+L+QHLF FGHPEVYI+ LP G IS I+ + E F +
Sbjct: 245 LLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTELIGYRWVVAAAISLAVLSFGLW 303
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL*RLGFVFL 537
HH+FT GI A F++A+ ++AVPT +++F + T+ GT P ++ L F
Sbjct: 304 VHHMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP-MMWILAFFAT 362
Query: 538 FTVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
F +GGLTGV++A D +HDT+++VAH HY
Sbjct: 363 FVIGGLTGVMVAVVPFDWQVHDTHFIVAHLHY 394
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 122 bits (293), Expect = 1e-26
Identities = 57/75 (76%), Positives = 63/75 (84%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
IN+R N+LSFDQ+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDP
Sbjct: 166 INMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDP 225
Query: 181 ILYQHLF*FFGHPEV 225
ILYQHLF FFGHP++
Sbjct: 226 ILYQHLFWFFGHPKL 240
Score = 43.6 bits (98), Expect = 0.004
Identities = 36/104 (34%), Positives = 39/104 (37%)
Frame = +2
Query: 242 QDLV*FLILFHXXXXXXXXXXXXXXFMLY*QLGY*DSLFEXXXXXXXXXXXXXXXXXXXX 421
QDLV F +LF FM L Y D LFE
Sbjct: 246 QDLVSFHMLFPKKVEKSKLLVVSVSFMQSWLLVYSDLLFELIMYLPSESMLKLELVLHQQ 305
Query: 422 XXXXXXXXXXKFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED 553
KFL D +MELKLI+ L FYED L FY Q ED
Sbjct: 306 LSLLLSQLGLKFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSED 349
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 118 bits (285), Expect = 9e-26
Identities = 55/137 (40%), Positives = 86/137 (62%)
Frame = +1
Query: 223 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 402
VY++ILP FG++SH + + G + + V AHH+FTVG+D+DTR
Sbjct: 1 VYVIILPVFGLVSHSLHRG-GLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDVDTR 59
Query: 403 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 582
YF+SAT++IA+PT IK+F + + + + + F+ +F +GG+TG++LANS
Sbjct: 60 VYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFLLGGVTGLVLANSE 118
Query: 583 IDITLHDTYYVVAHXHY 633
+D+ +HD+YYVVAH HY
Sbjct: 119 VDLVMHDSYYVVAHFHY 135
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 118 bits (283), Expect = 2e-25
Identities = 63/203 (31%), Positives = 101/203 (49%)
Frame = +1
Query: 22 LSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 201
+S Q+PL + ++ A A+ +LLTDR + FF+PA GGDPI Y HLF
Sbjct: 178 MSLGQVPLLAWSYLSSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLF 237
Query: 202 *FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTV 381
F HPEVY+L++P G++ ++ + +K + F AHH+F
Sbjct: 238 WFTFHPEVYVLVIPAIGMMYEMVPR-FSRKPIYSYNSGLFAFVLLTIVGFSSWAHHMFAT 296
Query: 382 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 561
G+ + F T+ + + +F +AT+ +I ++ ++ +G + LF G G
Sbjct: 297 GMSFTEKTVFMLGTLAAVPASAMHVFNFVATMWNGRIRFDSPMMWSIGGIALFFSAGAGG 356
Query: 562 VILANSSIDITLHDTYYVVAHXH 630
V+ A +D T HDTY+VV H H
Sbjct: 357 VLNAAMPLDFTTHDTYWVVGHFH 379
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 117 bits (282), Expect = 2e-25
Identities = 60/100 (60%), Positives = 73/100 (73%), Gaps = 14/100 (14%)
Frame = +1
Query: 364 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 543
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFT 408
Query: 544 VGGL--------------TGVILANSSIDITLHDTYYVVA 621
+GGL +GV+LAN+S+DI HDTYYVVA
Sbjct: 409 IGGLLNHLLWKINKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 99 bits (238), Expect = 4e-20
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +1
Query: 112 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 288
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 113 bits (272), Expect = 3e-24
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Frame = +1
Query: 7 LRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF---------- 156
+R L +P+F ++ +T + A+ IL +D L T++F
Sbjct: 182 MRAEGLRMRDIPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMA 241
Query: 157 -DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXX 333
D G +L+ HLF FFGHPEVYI+ P G+++ G++
Sbjct: 242 TDADNPGASLLWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVL 300
Query: 334 XXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 513
F+V HH+F GI++ + F + TI I++P + +F + T+ ++ + L
Sbjct: 301 VALQSFVVWMHHMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFL 360
Query: 514 *RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
LG + LF +GG+TGV L +D TY+VVAH HY
Sbjct: 361 FSLGALILFIIGGITGVFLGAIVLDYQFRGTYWVVAHFHY 400
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 103 bits (246), Expect = 5e-21
Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Frame = +1
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP-NIL*RLGFVFL 537
AHH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T + ++ L F+ L
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILL 61
Query: 538 FTVGGLTGVILANSSIDITLHDTYYVVAHXHY 633
FT+GG TGV++ N+ +DI LHDTYY+VAH H+
Sbjct: 62 FTLGGTTGVVMGNAGMDIALHDTYYIVAHFHF 93
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 101 bits (241), Expect = 2e-20
Identities = 46/90 (51%), Positives = 65/90 (72%), Gaps = 2/90 (2%)
Frame = +1
Query: 370 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFT 543
++T G+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFT 59
Query: 544 VGGLTGVILANSSIDITLHDTYYVVAHXHY 633
GG TGVIL N +ID+ LHDTYYV+AH H+
Sbjct: 60 FGGTTGVILGNGAIDVALHDTYYVIAHFHF 89
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 97.1 bits (231), Expect = 3e-19
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = +1
Query: 388 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 552
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGG 55
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 95.9 bits (228), Expect = 7e-19
Identities = 62/199 (31%), Positives = 95/199 (47%)
Frame = +1
Query: 37 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 216
LPLFV AV A G +LL ++ S++ GG +++++LF +FGH
Sbjct: 211 LPLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGH 269
Query: 217 PEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDID 396
PEVY+L+LPG G + +S + + +V HH F GI
Sbjct: 270 PEVYLLLLPGTGAMFDYLSN-LNHRPPYLKKWMIAAMGAISVDSVMVFLHHTFMTGIVFA 328
Query: 397 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 576
+ T I++PT + I +AT+ G + + IL L F +GG++GV ++
Sbjct: 329 WLMADSIFTETISIPTSMLIVGLIATMIGGRHKFQTPILFALAASTSFMIGGVSGVTQSS 388
Query: 577 SSIDITLHDTYYVVAHXHY 633
+ID +H YYVVAH HY
Sbjct: 389 LAIDTIVHGDYYVVAHFHY 407
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 89.8 bits (213), Expect = 5e-17
Identities = 59/210 (28%), Positives = 91/210 (43%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+ +R +S ++P+FV + A + L+D + F+ G P
Sbjct: 263 VYMRAKGMSLGRVPIFVWGLFAAATTLVVESPATYTGALMDLSDMIAGSHFYT-GPTGHP 321
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
+ Y F F HPEVY+ ILP F I I+ K+ F +
Sbjct: 322 LAYLDQFWFLFHPEVYVFILPAFAIWLEILPAA-AKRPLFARGWAIAGLVGVSMSGAMSG 380
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 540
HH FT D + T T +++PTG + TI G ++ N +L L + F
Sbjct: 381 VHHYFTAVSDARMPIFMT-ITETVSIPTGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNF 439
Query: 541 TVGGLTGVILANSSIDITLHDTYYVVAHXH 630
+GGLTG+ A+ D+ LH+TY+V+AH H
Sbjct: 440 LIGGLTGIFNADVPADLQLHNTYWVIAHFH 469
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 86.6 bits (205), Expect = 4e-16
Identities = 40/67 (59%), Positives = 49/67 (73%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+N+R ++ +LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDP
Sbjct: 169 LNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDP 228
Query: 181 ILYQHLF 201
ILYQHLF
Sbjct: 229 ILYQHLF 235
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 85.8 bits (203), Expect = 8e-16
Identities = 40/80 (50%), Positives = 54/80 (67%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+N+R N ++ +LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDP
Sbjct: 170 LNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDP 229
Query: 181 ILYQHLF*FFGHPEVYILIL 240
ILY+HLF FFG I++L
Sbjct: 230 ILYEHLFWFFGQTVATIIML 249
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/93 (43%), Positives = 52/93 (55%)
Frame = +1
Query: 205 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 384
FFGHPEVY+LILP FGI+SHI F +V AHH+F VG
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 385 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 483
D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 61 YDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 84.2 bits (199), Expect = 2e-15
Identities = 41/67 (61%), Positives = 47/67 (70%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
IN+R + + + LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDP
Sbjct: 152 INMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDP 211
Query: 181 ILYQHLF 201
ILYQHLF
Sbjct: 212 ILYQHLF 218
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 82.2 bits (194), Expect = 9e-15
Identities = 38/71 (53%), Positives = 49/71 (69%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
+N+R N ++ +LPLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDP
Sbjct: 170 LNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDP 229
Query: 181 ILYQHLF*FFG 213
ILY+HLF FFG
Sbjct: 230 ILYEHLFWFFG 240
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
IN+R N + + +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP
Sbjct: 187 INMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDP 246
Query: 181 ILYQHLF*FFGH--PEVYILIL 240
+LY+H+F FFG P + I+I+
Sbjct: 247 LLYEHIFWFFGQIWPIIIIIII 268
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = -1
Query: 200 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKG 39
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSG 53
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/80 (46%), Positives = 50/80 (62%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
IN+R + ++ +PLF AV TA A +T+ + DRN NTSFF+ AGGGD
Sbjct: 175 INMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDA 234
Query: 181 ILYQHLF*FFGHPEVYILIL 240
+LYQHLF ++ HPEV I+ L
Sbjct: 235 VLYQHLFYWWNHPEVKIICL 254
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/85 (48%), Positives = 54/85 (63%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 180
IN+R N + + +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP
Sbjct: 187 INMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDP 246
Query: 181 ILYQHLF*FFGHPEVYILILPGFGI 255
+LY+H+ F+ +P V ILI GI
Sbjct: 247 LLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 73.3 bits (172), Expect = 4e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +3
Query: 192 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLS 362
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 67.3 bits (157), Expect = 3e-10
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Frame = +1
Query: 205 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 384
FFGHP VY + P FG + + I K+ F ++ HH+ T
Sbjct: 2 FFGHPVVYYVPFPLFGALYYYIPIY-AKRSLFSEKWARWNIFLLAIGSMLIWVHHLQTFP 60
Query: 385 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL-----FTVG 549
+ +D RA+ T +T+++A +G+ + TI T Y+ LG FL F +G
Sbjct: 61 LPVDLRAWITVSTLVLASGSGLTVLNLGLTIL-TSKGYDYKD--PLGMTFLIALIGFIIG 117
Query: 550 GLTGVILANSSIDITLHDTYYVVAHXHY 633
G+ + L + I+ +H+TYYVV H HY
Sbjct: 118 GVQALPLPINIINGVVHNTYYVVGHFHY 145
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 62.5 bits (145), Expect = 8e-09
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +1
Query: 352 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL-*RLGF 528
+V HH+F VG D+ T +F+S T+II VPTGIK+F L + ++ N I+ +GF
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGF 85
Query: 529 VFLFTVGGLTG 561
+FLFT+GG G
Sbjct: 86 IFLFTMGGRQG 96
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 60.5 bits (140), Expect = 3e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +3
Query: 48 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 215
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 60.1 bits (139), Expect = 4e-08
Identities = 32/73 (43%), Positives = 42/73 (57%)
Frame = +1
Query: 22 LSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 201
L+ DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++
Sbjct: 9 LNSDQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYML 68
Query: 202 *FFGHPEVYILIL 240
FGH +V LIL
Sbjct: 69 WLFGHTDVLFLIL 81
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 59.7 bits (138), Expect = 6e-08
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Frame = +1
Query: 181 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 360
+L+ LF F+GHP VY + P FG + + I Q G + + V
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAG-RSLYSEKWARWNIYLLAIGTMGVW 282
Query: 361 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY---NPNIL*RLGFV 531
HH+ T + I R + +T+I+A +G+ + TI T Y +P + L +
Sbjct: 283 VHHLQTWPLPIVLREWVNLSTLILATGSGLTVLNLGLTIF-TSRKYDWKDPVGMGALISL 341
Query: 532 FLFTVGGLTGVILANSSIDITLHDTYYVVAHXH 630
F + G ++L +SI+ H++YYVV H H
Sbjct: 342 IGFILAGAQALVLPENSINPLFHNSYYVVGHFH 374
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 56.8 bits (131), Expect = 4e-07
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +1
Query: 364 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 513
HH+FTVG+D++T +F+S T+II VPTGIK+F L + +++N IL
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 55.2 bits (127), Expect = 1e-06
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 1/162 (0%)
Frame = +1
Query: 148 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 327
S +P G + L ++F FFGHP VY L+ P + +++ + ++
Sbjct: 242 STVNPNFGINVGLADNMFWFFGHPIVYQLLFPAVAAL-YLLFELGSNRDWLGYTVTGAIW 300
Query: 328 XXXXXXXFIV*AHHIFTVGID-IDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 504
+V HH++ + + +T+ I++ + + +F LA + + I P
Sbjct: 301 VLATVTNLLVWVHHLYLYPFEPLPVNLMSQLSTMGISIVSAVSVFALLAMMWRSGIKMTP 360
Query: 505 NIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXH 630
+ L +F + G +GV A + ++ LH+T +VVAH H
Sbjct: 361 PYMFSLIAMFAWLEAGYSGVAQAIVAWNLYLHNTLWVVAHFH 402
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +1
Query: 370 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 459
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 54.4 bits (125), Expect = 2e-06
Identities = 38/154 (24%), Positives = 61/154 (39%)
Frame = +1
Query: 169 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 348
G DPI Q F FGH VY+ +P G + +++ K +
Sbjct: 233 GLDPIANQIAFWIFGHAIVYMAWVPAVGAL-YLLIPMLANKPLYSDRMGRISALLYLIFS 291
Query: 349 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGF 528
V HH++ V + I + T + +P+ + F AT G + +N +
Sbjct: 292 NNVPIHHLYMVNLPIALKLLQEVLTYSVVIPSMMTFFNLWATAKGADVKWNIITAWTVTS 351
Query: 529 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHXH 630
G+TG+ A S D +H+T +VV H H
Sbjct: 352 FAGAIAAGVTGISNATISFDAIVHNTDWVVGHFH 385
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/54 (51%), Positives = 34/54 (62%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 162
+N++ +S Q PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 158 MNMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 391 IDTRAYFTSATIIIAVPTGIKIFR*LAT 474
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 51 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 203
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 48.4 bits (110), Expect = 1e-04
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Frame = +1
Query: 175 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 354
D +L + LF +FGHP VY +LP + + I + G F
Sbjct: 207 DVLLARTLFWWFGHPLVYFWLLPAVALWYYAIPRILG-VPLFSETMAKVAYILYMIASTP 265
Query: 355 V*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL----- 513
V HH F GI + T T ++A P+ + F LAT+ ++ ++
Sbjct: 266 VGLHHQFVDPGIGPFFKLVHTLVTFVVATPSMLTAFNILATLERAGRMRGGRGLVGWVFK 325
Query: 514 ---*RLGF------VFLFTVGGLTGVILANSSIDITLHDTYYVVAHXH 630
L F + LF GG+TG+I A+ ++ +H+T ++V H H
Sbjct: 326 LPWGSLAFSGLMLPIILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 48.0 bits (109), Expect = 2e-04
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 17/169 (10%)
Frame = +1
Query: 175 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 354
D + ++ F FFGHP VY ++P I I+ + G E F
Sbjct: 206 DVLEWRLWFWFFGHPLVYFWLVPAVTIWYTILPRVLG-TEVFSKTAAKAAFMLYLIASVP 264
Query: 355 V*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG--------------TQ 489
V HH F G+ + T T ++AVP+ I F +AT+ T
Sbjct: 265 VGLHHQFVDPGVHPVYKYLHTVLTYLVAVPSFITAFNVIATLEKAGRMRGGKGLFGWITA 324
Query: 490 INYNPN-IL*RLGF-VFLFTVGGLTGVILANSSIDITLHDTYYVVAHXH 630
+ + + + + F + LF + G +GV+ A+ +++ +H+T +VV H H
Sbjct: 325 LPWGKDPVFTGITFAIILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFH 373
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 192 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSSY 371
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 372 IH 377
+H
Sbjct: 61 VH 62
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 44.0 bits (99), Expect = 0.003
Identities = 29/92 (31%), Positives = 43/92 (46%)
Frame = +3
Query: 63 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 242
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 243 RIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNW 338
I ++ +K N ++NNL ++ W
Sbjct: 154 SIRNRITHLHNIFSQKSNILYYKNNLRHSIYW 185
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 43.6 bits (98), Expect = 0.004
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 16/170 (9%)
Frame = +1
Query: 169 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 348
G DP+L + LF F GHP VY +LP + + + Q+ G + F
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAGGR-LFSDPMARVSFILFLILS 282
Query: 349 FIV*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQIN--------- 495
+ HH +T GI + T + P+ + F +A++ +G +
Sbjct: 283 TPIGMHHQYTDPGISEIWKLVHAIFTFGVFFPSLLTFFNVVASLENGGRARGGKGWLVWV 342
Query: 496 YN-----PNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXH 630
+N P+ ++ + LF GG G+I A+ +I++ +H+T ++ H H
Sbjct: 343 FNLPWREPSFTTQVLAMILFAFGGAGGLINASYNINLVVHNTSWISGHFH 392
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 43.2 bits (97), Expect = 0.005
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 25/177 (14%)
Frame = +1
Query: 175 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK-ETFXXXXXXXXXXXXXXXXF 351
+P+L + LF FFGHP VY +LP + + I+ + +K + +
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGKLYSDPAARLAFILFLIFSL 268
Query: 352 IV*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI------ 510
V HH FT GI + T +A+P+ I F ++ + +P +
Sbjct: 269 PVGLHHQFTDPGITNTWKLIHALFTFGVALPSMITAFTVATSLEYSVKAEHPELKNSKFY 328
Query: 511 ------L*RL-GFVFLFT----------VGGLTGVILANSSIDITLHDTYYVVAHXH 630
RL G ++F+ +GG+TG++ A+ ++++ +H+T YV H H
Sbjct: 329 WWTFLPFMRLEGNKWMFSYFFAGLVLFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 42.7 bits (96), Expect = 0.007
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = -1
Query: 485 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQT 354
VP + +H K LIPVGT +I+V E+K V S PTVN+ AQT
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQT 94
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 42.3 bits (95), Expect = 0.009
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 147
IN+R L+ D++ L ++ ITA AGAIT+LLTDRN+NT
Sbjct: 153 INMRHTMLTMDKISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 41.9 bits (94), Expect = 0.012
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +1
Query: 1 INLRXNHLSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 135
IN+R ++ D++PLF+ AV IT AGAIT+LLTDR
Sbjct: 110 INMRAKGMTLDRVPLFIWAVFITTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 37.5 bits (83), Expect = 0.27
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 16/168 (9%)
Frame = +1
Query: 175 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 354
DP+L + LF F GH VY +LP + ++ ++ G K
Sbjct: 223 DPLLTRTLFWFTGHAIVYAWLLPAYVSWYALVPRQAGGK-IVSDSLTRLVFILFLLLSIP 281
Query: 355 V*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI------HGTQ--INY--- 498
HH +T GI + T + P+ I F +A++ HG + + +
Sbjct: 282 TGFHHQYTDPGIHEGFKFVHAILTFGVFFPSLITAFSVMASLEMGGRAHGGRGLLGWIPK 341
Query: 499 ----NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXH 630
+P++ +L + F GG+TG+I A+ +++ +H+T +V H H
Sbjct: 342 LPWGDPSLSAQLLAMITFVFGGITGLINASFTMNQVVHNTTWVPGHFH 389
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 562 VILANSSIDITLHDTYYVVAHXHY 633
+ L+ D T HDTYYVVAH HY
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHY 52
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 217 PEVYILILPGFGIISHIISQERGKK 291
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 34.3 bits (75), Expect = 2.5
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 456 F*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQF 578
F MT Y +W++N L P + FC FI+ N +FSQF
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQF 64
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 34.3 bits (75), Expect = 2.5
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Frame = +1
Query: 403 AYFTSATIIIAVPTGIKIFR*LATIHGTQINY-------NPNIL*RLGFVFLFT-VGGLT 558
A F S A+P G++ R + G + NP + + LF +GG+T
Sbjct: 316 AAFASMIHAFAIPAGLEAGRRQRGLGGGLFGWLTSGPWKNPVFSATIFSIILFGFMGGIT 375
Query: 559 GVILANSSIDITLHDTYYVVAHXH 630
GV++ +++T H+T+ V H H
Sbjct: 376 GVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 33.5 bits (73), Expect = 4.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 520 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHXH 630
L + +GG++GV + I+I +H+T YV H H
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFH 387
>UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: SakB -
Lactobacillus sakei
Length = 430
Score = 33.1 bits (72), Expect = 5.8
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +3
Query: 168 RRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIR 347
RRR FI+ F I + +LY + + + S YF K KK N +L N+L + + +
Sbjct: 35 RRRVLFIAVFFPITFLV-ALYSDISNVIPILSGYFILKEKKENDYLLLNDLLFCTFIIFG 93
Query: 348 IHCLSSS 368
+ LSS+
Sbjct: 94 CNVLSSN 100
>UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2;
Cryptosporidium|Rep: Cation-transporting ATPase -
Cryptosporidium parvum Iowa II
Length = 1434
Score = 33.1 bits (72), Expect = 5.8
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 195 FILIFWT--S*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSS 368
+I+ FW+ S SLYFN + N + T KK N L + +C+ + + S +
Sbjct: 558 YIIPFWSTSSMSLYFNNAIKYLNSEHILTTNPKKLNQLLLVDTICFDKTGTLTVPTFSIN 617
Query: 369 YIH 377
+H
Sbjct: 618 NVH 620
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 7.6
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -1
Query: 188 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 51
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 425,523,513
Number of Sequences: 1657284
Number of extensions: 7577501
Number of successful extensions: 19047
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 17760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18861
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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