Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_G18
(704 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 87 5e-16
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 55 2e-06
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 50 6e-05
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 47 4e-04
UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-direct... 44 0.004
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 41 0.034
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 40 0.045
UniRef50_Q2F5Z1 Cluster: Lysosomal thiol reductase IP30 isoform ... 39 0.14
UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ... 38 0.32
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 36 0.73
UniRef50_Q17GC2 Cluster: Putative uncharacterized protein; n=2; ... 35 2.2
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 34 3.0
UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 34 3.9
UniRef50_P23678 Cluster: Kinesin-like protein unc-104; n=3; Caen... 34 3.9
UniRef50_UPI00015B63CC Cluster: PREDICTED: similar to ENSANGP000... 33 6.8
UniRef50_A1Z8P9 Cluster: CG8274-PA; n=4; Drosophila melanogaster... 33 9.0
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse
transcriptase-like protein; n=9; cellular organisms|Rep:
Endonuclease and reverse transcriptase-like protein -
Bombyx mori (Silk moth)
Length = 960
Score = 86.6 bits (205), Expect = 5e-16
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = -3
Query: 561 RRVMTYASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDDL 415
R VMTYASVVF HAA T++ LQ +QSRFCR+AVGAPWF+RNVDLHDDL
Sbjct: 819 RPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDL 867
Score = 35.9 bits (79), Expect = 0.97
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -2
Query: 382 RRRPKHVITDPPDPLTVFLGITST 311
RRRP+HV+TDP DP+T+ L S+
Sbjct: 913 RRRPRHVLTDPSDPITLALDTFSS 936
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = -3
Query: 561 RRVMTYASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDDLE 412
R V+TY+ VF H + N LQV Q+R R G PW++R VDLH +LE
Sbjct: 30 RPVITYSCPVFAHMSKDNFHKLQVFQNRVLRKVTGTPWYIRRVDLHRNLE 79
Score = 33.9 bits (74), Expect = 3.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 406 PVDRMVNSRRRPKHVITDPPDPLT 335
PV RRRP+H+ DPPD +T
Sbjct: 114 PVPNAARPRRRPRHIFIDPPDEIT 137
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 50.0 bits (114), Expect = 6e-05
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = -3
Query: 555 VMTYASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDDLE 412
+ TY S ++ +A+ +N+ +Q QSR RI GAPW+LRN ++H DL+
Sbjct: 793 IWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLK 840
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -3
Query: 561 RRVMTYASVVFVHA-AHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDDLE 412
R MTYASV + A T + LQ Q++F R A APWF+RN LH +++
Sbjct: 1272 RPTMTYASVAWAFAPCKTRMHKLQTFQNKFLRQAFNAPWFVRNNQLHREVK 1322
>UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 494
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = -3
Query: 567 TPRRVMTYASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDDLE 412
T R +++YAS + AA +NL + +Q++ R APWF+RN +L DL+
Sbjct: 393 TLRPILSYASPCWGSAASSNLSHILTVQNKIIRQISNAPWFIRNKNLEKDLK 444
>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
Length = 191
Score = 40.7 bits (91), Expect = 0.034
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -2
Query: 406 PVDRMVNSRRRPKHVITDPPDPLTVFLGITSTGH 305
P D SRR P HV++DP D L+V L ++STG+
Sbjct: 26 PRDGATKSRRHPNHVLSDPRDSLSVLLDLSSTGY 59
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 40.3 bits (90), Expect = 0.045
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = -3
Query: 546 YASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDDLE 412
Y ++ A +++K +Q IQ++ R+ G WF+RN LH DL+
Sbjct: 805 YGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLK 849
>UniRef50_Q2F5Z1 Cluster: Lysosomal thiol reductase IP30 isoform 1;
n=2; Bombyx mori|Rep: Lysosomal thiol reductase IP30
isoform 1 - Bombyx mori (Silk moth)
Length = 228
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 649 SPGQQASLLSIIXLPTPH 702
SPGQQASLLSII LPTPH
Sbjct: 129 SPGQQASLLSIISLPTPH 146
>UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein;
n=80; Culicimorpha|Rep: Reverse transcriptase homolog
protein - Chironomus thummi
Length = 883
Score = 37.5 bits (83), Expect = 0.32
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -3
Query: 561 RRVMTYASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDD 418
R + TY F A T+L+ LQV+Q++F RI + + R DLH +
Sbjct: 808 RPIFTYGCSAFGSMAKTHLQKLQVLQNKFLRIVLNKTRYERITDLHTE 855
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 36.3 bits (80), Expect = 0.73
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = -3
Query: 546 YASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDDLE 412
Y V+ AA ++L ++++Q++ R GAPW++R D+ DL+
Sbjct: 810 YGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLK 854
>UniRef50_Q17GC2 Cluster: Putative uncharacterized protein; n=2;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 489
Score = 34.7 bits (76), Expect = 2.2
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -1
Query: 350 SRSINGVFRYHKHRSPSS-SNPSLATKGSTSELT 252
S +NG FR+H+HR PS+ + P+ +T +T+ T
Sbjct: 342 SNEVNGEFRHHRHRRPSTEATPTTSTTSTTTTTT 375
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 34.3 bits (75), Expect = 3.0
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -3
Query: 570 HTPRRVMTYASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDDL 415
H + Y ++ AA +N +QV+Q+R R P+++R LH DL
Sbjct: 803 HCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDL 854
>UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1249
Score = 33.9 bits (74), Expect = 3.9
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 561 RRVMTYASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRN 436
R + TYA V+ A ++LKP++ R R + PW++RN
Sbjct: 1127 RSIQTYAIPVWGAAGESHLKPIEGSFFRMLRSILDIPWYIRN 1168
>UniRef50_P23678 Cluster: Kinesin-like protein unc-104; n=3;
Caenorhabditis|Rep: Kinesin-like protein unc-104 -
Caenorhabditis elegans
Length = 1584
Score = 33.9 bits (74), Expect = 3.9
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -1
Query: 440 GTWIFMMTWNRSCRPNGKQSTSPKTRHYGSSRSING---VFRYHKHRSPSSSNPSLA 279
G M N SC NGKQ T+P H G SR I G VFRY+ + S +LA
Sbjct: 521 GNVTLTMKPNASCYINGKQVTTPTVLHTG-SRVILGEHHVFRYNDPQEARQSRHNLA 576
>UniRef50_UPI00015B63CC Cluster: PREDICTED: similar to
ENSANGP00000005472; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000005472 - Nasonia
vitripennis
Length = 2581
Score = 33.1 bits (72), Expect = 6.8
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -2
Query: 676 TAATPAVPGSX*SKNKNESCASISNILSV*SMICTPYAPSRHDVCK 539
T TP+V + + +SCAS+S I+S+ S +C A HD+ +
Sbjct: 259 TPPTPSVAATTIPAPEAKSCASVSTIISLLSTLCRGSASITHDLLR 304
>UniRef50_A1Z8P9 Cluster: CG8274-PA; n=4; Drosophila melanogaster|Rep:
CG8274-PA - Drosophila melanogaster (Fruit fly)
Length = 2346
Score = 32.7 bits (71), Expect = 9.0
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 407 SCRPNGKQSTSPKTRHYGSSRSINGVFRYHKHRSPSSSNPSLATKGSTSE 258
S + G QS P T GSS S + V H +PSSSN + G +S+
Sbjct: 1843 SIQDGGSQSQQPSTS--GSSSSSSTVVSSHSRHTPSSSNVTTTQAGCSSQ 1890
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,186,299
Number of Sequences: 1657284
Number of extensions: 12250952
Number of successful extensions: 25593
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 24661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25583
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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