Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_G18
(704 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 50 3e-06
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 50 3e-06
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 40 0.002
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 40 0.002
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 36 0.041
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 36 0.041
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 34 0.16
AY050227-1|AAK84926.1| 951|Drosophila melanogaster SD01380p pro... 33 0.50
AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA... 33 0.50
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 32 0.66
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 32 0.66
AY118452-1|AAM49821.1| 318|Drosophila melanogaster AT09813p pro... 31 1.5
AE014296-2502|AAF49643.2| 318|Drosophila melanogaster CG7804-PA... 31 1.5
U91980-1|AAC47506.1| 2346|Drosophila melanogaster Tpr homolog pr... 30 2.7
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 30 3.5
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 30 3.5
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 30 3.5
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 30 3.5
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 30 3.5
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 30 3.5
BT029039-1|ABJ16972.1| 1718|Drosophila melanogaster IP03621p pro... 29 8.1
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = -3
Query: 555 VMTYASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDDLE 412
+ TY S ++ +A+ +N+ +Q QSR RI GAPW+LRN ++H DL+
Sbjct: 793 IWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLK 840
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = -3
Query: 555 VMTYASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDDLE 412
+ TY S ++ +A+ +N+ +Q QSR RI GAPW+LRN ++H DL+
Sbjct: 793 IWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLK 840
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/47 (34%), Positives = 31/47 (65%)
Frame = -3
Query: 555 VMTYASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDDL 415
+ TY S ++ +A+++N+ +Q QS+ R GAPW++R+ ++ DL
Sbjct: 795 IWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDL 841
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = -3
Query: 546 YASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDDLE 412
Y ++ A +++K +Q IQ++ R+ G WF+RN LH DL+
Sbjct: 805 YGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLK 849
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 36.3 bits (80), Expect = 0.041
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = -3
Query: 546 YASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDDLE 412
Y V+ AA ++L ++++Q++ R GAPW++R D+ DL+
Sbjct: 810 YGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLK 854
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 36.3 bits (80), Expect = 0.041
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = -3
Query: 546 YASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDDLE 412
Y V+ AA ++L ++++Q++ R GAPW++R D+ DL+
Sbjct: 612 YGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLK 656
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 34.3 bits (75), Expect = 0.16
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -3
Query: 570 HTPRRVMTYASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLHDDL 415
H + Y ++ AA +N +QV+Q+R R P+++R LH DL
Sbjct: 803 HCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDL 854
>AY050227-1|AAK84926.1| 951|Drosophila melanogaster SD01380p
protein.
Length = 951
Score = 32.7 bits (71), Expect = 0.50
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 407 SCRPNGKQSTSPKTRHYGSSRSINGVFRYHKHRSPSSSNPSLATKGSTSE 258
S + G QS P T GSS S + V H +PSSSN + G +S+
Sbjct: 448 SIQDGGSQSQQPSTS--GSSSSSSTVVSSHSRHTPSSSNVTTTQAGCSSQ 495
>AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA
protein.
Length = 2346
Score = 32.7 bits (71), Expect = 0.50
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 407 SCRPNGKQSTSPKTRHYGSSRSINGVFRYHKHRSPSSSNPSLATKGSTSE 258
S + G QS P T GSS S + V H +PSSSN + G +S+
Sbjct: 1843 SIQDGGSQSQQPSTS--GSSSSSSTVVSSHSRHTPSSSNVTTTQAGCSSQ 1890
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 32.3 bits (70), Expect = 0.66
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = -3
Query: 555 VMTYASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLH 424
++ Y S V+ A T++K LQ+ Q++ ++ + P++ LH
Sbjct: 827 ILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLH 870
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 32.3 bits (70), Expect = 0.66
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = -3
Query: 555 VMTYASVVFVHAAHTNLKPLQVIQSRFCRIAVGAPWFLRNVDLH 424
++ Y S V+ A T++K LQ+ Q++ ++ + P++ LH
Sbjct: 775 ILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLH 818
>AY118452-1|AAM49821.1| 318|Drosophila melanogaster AT09813p
protein.
Length = 318
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 394 FGLQD-RFQVIMKIHVPEKPWCSDGYPAKSGLNNLKGFQVSVGRVNE 531
FG D + V+ K H + WC PA G+ N + +V VGR E
Sbjct: 155 FGSYDVQMHVLSKRHSIDGRWCEVKVPASRGMGNQEPGKVFVGRCTE 201
>AE014296-2502|AAF49643.2| 318|Drosophila melanogaster CG7804-PA
protein.
Length = 318
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 394 FGLQD-RFQVIMKIHVPEKPWCSDGYPAKSGLNNLKGFQVSVGRVNE 531
FG D + V+ K H + WC PA G+ N + +V VGR E
Sbjct: 155 FGSYDVQMHVLSKRHSIDGRWCEVKVPASRGMGNQEPGKVFVGRCTE 201
>U91980-1|AAC47506.1| 2346|Drosophila melanogaster Tpr homolog
protein.
Length = 2346
Score = 30.3 bits (65), Expect = 2.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 407 SCRPNGKQSTSPKTRHYGSSRSINGVFRYHKHRSPSSSNPSLATKG 270
S + G QS P T GSS S + V H +PSSSN + G
Sbjct: 1843 SIQDGGSQSQQPSTS--GSSSSSSTVVSSHSRHTPSSSNVTTTQAG 1886
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -1
Query: 395 NGKQSTSPKTRHYGSSRSINGVFRYHKHRSPSSSNPSLATKGSTSELTHRH 243
NG + +TRH RS R H RSPSS + S ++ S+ +H H
Sbjct: 417 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSH 466
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -1
Query: 395 NGKQSTSPKTRHYGSSRSINGVFRYHKHRSPSSSNPSLATKGSTSELTHRH 243
NG + +TRH RS R H RSPSS + S ++ S+ +H H
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSH 472
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -1
Query: 395 NGKQSTSPKTRHYGSSRSINGVFRYHKHRSPSSSNPSLATKGSTSELTHRH 243
NG + +TRH RS R H RSPSS + S ++ S+ +H H
Sbjct: 366 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSH 415
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -1
Query: 395 NGKQSTSPKTRHYGSSRSINGVFRYHKHRSPSSSNPSLATKGSTSELTHRH 243
NG + +TRH RS R H RSPSS + S ++ S+ +H H
Sbjct: 366 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSH 415
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -1
Query: 395 NGKQSTSPKTRHYGSSRSINGVFRYHKHRSPSSSNPSLATKGSTSELTHRH 243
NG + +TRH RS R H RSPSS + S ++ S+ +H H
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSH 472
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -1
Query: 395 NGKQSTSPKTRHYGSSRSINGVFRYHKHRSPSSSNPSLATKGSTSELTHRH 243
NG + +TRH RS R H RSPSS + S ++ S+ +H H
Sbjct: 423 NGVPTHPIRTRHNLHGRSTTSSSRSHS-RSPSSYSSSHSSSSSSHSSSHSH 472
>BT029039-1|ABJ16972.1| 1718|Drosophila melanogaster IP03621p
protein.
Length = 1718
Score = 28.7 bits (61), Expect = 8.1
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -1
Query: 401 RPNGKQSTSPKTRHYGSSRSINGVFRYHKHRS--PSSSNPSLATKGSTSELTHR 246
+PNG Q T K +R+ NG + + ++ SSS+ S +T +T+ TH+
Sbjct: 170 QPNGTQHTQRKQLEVLKARTANGAMQVIRTQTVQKSSSSWSSSTSTTTTSTTHQ 223
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,409,683
Number of Sequences: 53049
Number of extensions: 587614
Number of successful extensions: 1509
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1503
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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