Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_G17
         (358 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC098419-1|AAH98419.1|  668|Homo sapiens TBC1D10B protein protein.     28   9.8  
BC093816-1|AAH93816.1|  533|Homo sapiens TBC1 domain family, mem...    28   9.8  
BC093814-1|AAH93814.1|  533|Homo sapiens TBC1 domain family, mem...    28   9.8  
BC072453-1|AAH72453.2|  533|Homo sapiens TBC1 domain family, mem...    28   9.8  
BC063112-1|AAH63112.1|  622|Homo sapiens TBC1D10B protein protein.     28   9.8  
BC050523-1|AAH50523.2|  385|Homo sapiens TBC1D10B protein protein.     28   9.8  
AL117408-1|CAB55908.1|  233|Homo sapiens hypothetical protein pr...    28   9.8  
AK023192-1|BAB14454.1|  533|Homo sapiens protein ( Homo sapiens ...    28   9.8  
AK002101-1|BAA92086.1|  289|Homo sapiens protein ( Homo sapiens ...    28   9.8  

>BC098419-1|AAH98419.1|  668|Homo sapiens TBC1D10B protein protein.
          Length = 668

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = +1

Query: 97  RPSQLVHGSRRVHRARR---GCLHRSAGLLSL 183
           RPS+ +HGSR +H  RR     L  S+ LLSL
Sbjct: 491 RPSRRLHGSRAIHEERRRQQPPLGPSSSLLSL 522


>BC093816-1|AAH93816.1|  533|Homo sapiens TBC1 domain family, member
           10B protein.
          Length = 533

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = +1

Query: 97  RPSQLVHGSRRVHRARR---GCLHRSAGLLSL 183
           RPS+ +HGSR +H  RR     L  S+ LLSL
Sbjct: 356 RPSRRLHGSRAIHEERRRQQPPLGPSSSLLSL 387


>BC093814-1|AAH93814.1|  533|Homo sapiens TBC1 domain family, member
           10B protein.
          Length = 533

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = +1

Query: 97  RPSQLVHGSRRVHRARR---GCLHRSAGLLSL 183
           RPS+ +HGSR +H  RR     L  S+ LLSL
Sbjct: 356 RPSRRLHGSRAIHEERRRQQPPLGPSSSLLSL 387


>BC072453-1|AAH72453.2|  533|Homo sapiens TBC1 domain family, member
           10B protein.
          Length = 533

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = +1

Query: 97  RPSQLVHGSRRVHRARR---GCLHRSAGLLSL 183
           RPS+ +HGSR +H  RR     L  S+ LLSL
Sbjct: 356 RPSRRLHGSRAIHEERRRQQPPLGPSSSLLSL 387


>BC063112-1|AAH63112.1|  622|Homo sapiens TBC1D10B protein protein.
          Length = 622

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = +1

Query: 97  RPSQLVHGSRRVHRARR---GCLHRSAGLLSL 183
           RPS+ +HGSR +H  RR     L  S+ LLSL
Sbjct: 445 RPSRRLHGSRAIHEERRRQQPPLGPSSSLLSL 476


>BC050523-1|AAH50523.2|  385|Homo sapiens TBC1D10B protein protein.
          Length = 385

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = +1

Query: 97  RPSQLVHGSRRVHRARR---GCLHRSAGLLSL 183
           RPS+ +HGSR +H  RR     L  S+ LLSL
Sbjct: 208 RPSRRLHGSRAIHEERRRQQPPLGPSSSLLSL 239


>AL117408-1|CAB55908.1|  233|Homo sapiens hypothetical protein
           protein.
          Length = 233

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = +1

Query: 97  RPSQLVHGSRRVHRARR---GCLHRSAGLLSL 183
           RPS+ +HGSR +H  RR     L  S+ LLSL
Sbjct: 56  RPSRRLHGSRAIHEERRRQQPPLGPSSSLLSL 87


>AK023192-1|BAB14454.1|  533|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13130 fis, clone NT2RP3002972, weakly similar to
           Halocynthia roretzi mRNA for HrPET-1. ).
          Length = 533

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = +1

Query: 97  RPSQLVHGSRRVHRARR---GCLHRSAGLLSL 183
           RPS+ +HGSR +H  RR     L  S+ LLSL
Sbjct: 356 RPSRRLHGSRAIHEERRRQQPPLGPSSSLLSL 387


>AK002101-1|BAA92086.1|  289|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11239 fis, clone PLACE1008533. ).
          Length = 289

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = +1

Query: 97  RPSQLVHGSRRVHRARR---GCLHRSAGLLSL 183
           RPS+ +HGSR +H  RR     L  S+ LLSL
Sbjct: 112 RPSRRLHGSRAIHEERRRQQPPLGPSSSLLSL 143


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,825,524
Number of Sequences: 237096
Number of extensions: 224029
Number of successful extensions: 669
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)