Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_G16
         (796 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1A6.05c |||triacylglycerol lipase|Schizosaccharomyces pombe|...    29   0.77 
SPMIT.06 |||mitochondrial DNA binding endonuclease|Schizosacchar...    27   2.3  
SPAC977.10 |sod2||CPA1 sodium ion/proton antiporter |Schizosacch...    27   3.1  
SPBC32F12.01c ||SPBC685.10c|inositol phosphosphingolipid phospho...    26   5.4  
SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+, L-...    26   7.1  

>SPAC1A6.05c |||triacylglycerol lipase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 483

 Score = 29.1 bits (62), Expect = 0.77
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +2

Query: 596 DYTIKPSELFDNDVYLEEITDVICISLAEIPNLLNICDVVEVLLY 730
           D+T +  E +D   Y+  +T V C SL E+P+LLN      VL++
Sbjct: 245 DFTFQ--EAYDRSGYILNVT-VSCGSLFEMPSLLNYITAPNVLVW 286


>SPMIT.06 |||mitochondrial DNA binding
           endonuclease|Schizosaccharomyces pombe|chr
           mitochondrial|||Manual
          Length = 807

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
 Frame = +2

Query: 260 ALISPLXITXYCAEAKXXILTLLSGIDLVNFIVSLLSIE---FHVLEADVKKEQQMRQKS 430
           +++SP+    Y  +    I  L S  D    I    + E    H L A  K+E    +  
Sbjct: 425 SIVSPILANIYLHQLDEFIENLKSEFDYKGPIARKRTSESRHLHYLMAKAKRENADSKTI 484

Query: 431 GSQCIESTLIPNIINGIASD 490
               IE   +PN I+GI S+
Sbjct: 485 RKIAIEMRNVPNKIHGIQSN 504


>SPAC977.10 |sod2||CPA1 sodium ion/proton antiporter
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 468

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 534 DRTRRTLLEESDCSKSLAIPLIIFGISV 451
           +R R  L+ ES C+  +A+P   F I +
Sbjct: 164 ERIRSLLIAESGCNDGMAVPFFYFAIKL 191


>SPBC32F12.01c ||SPBC685.10c|inositol phosphosphingolipid
           phospholipase C |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 424

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 486 LAIPLIIFGISVDSMHCDPLFCLICCSFFT 397
           ++IPLII G+ V    CDP +  +   FFT
Sbjct: 342 ISIPLII-GVHVAIAWCDPAWLKVIILFFT 370


>SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+,
           L-lysine forming] |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 368

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = +2

Query: 566 EFNQTKNTNADYTIKPSELFDNDVYLEEITDVIC-ISLAEIPN--LLNICDV 712
           + N+TK       I  S++F N +YL       C +    +PN  L  +CDV
Sbjct: 227 DINETKKGGPFTEITESDIFVNCIYLSMPIPKFCTVESLNVPNRKLRVVCDV 278


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,577,531
Number of Sequences: 5004
Number of extensions: 43685
Number of successful extensions: 92
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)