Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_G16
         (796 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0303 - 17506392-17506399,17507055-17507286,17507390-175074...    29   5.6  
06_03_1296 - 29104857-29105870                                         28   9.8  
06_03_0721 - 23861426-23861929,23862013-23862219,23862598-238628...    28   9.8  
04_03_0811 - 19909128-19912214                                         28   9.8  
03_05_0450 - 24443396-24443501,24443642-24443794,24446213-24446325     28   9.8  
02_05_0668 + 30749474-30750007,30750818-30751403,30751405-307524...    28   9.8  

>02_03_0303 -
           17506392-17506399,17507055-17507286,17507390-17507461,
           17507561-17508586,17509194-17509448,17510483-17510962
          Length = 690

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +2

Query: 623 FDNDVYLEEITDVICISLAEIPNLLNICDVVEVLLYVNKGPSIISWVVANQPDMXQEV 796
           F+ND   +E    +      I N +   DV+ +L Y+ KGP ++  V+ NQ  + Q V
Sbjct: 441 FENDAVRKEAAIAVLALCGYIGNNMVTDDVLLLLDYLPKGPCVLE-VICNQTVVEQLV 497


>06_03_1296 - 29104857-29105870
          Length = 337

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = -2

Query: 510 EESDCSKSLAIPLIIFGISVDS 445
           E+++CSK L +PL +F + ++S
Sbjct: 7   EKNNCSKELMVPLALFAVELNS 28


>06_03_0721 -
           23861426-23861929,23862013-23862219,23862598-23862852,
           23862858-23863212,23863533-23863834,23864006-23864281,
           23864854-23865167,23865411-23865683,23865831-23866415,
           23866806-23867132,23867270-23867337,23868670-23868746
          Length = 1180

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = +2

Query: 581 KNTNADYTIKPSE---LFDNDVYLEEITDVICISLAEIPNLLNICDVVEVLLYVNKGP 745
           K +     I PS+    F   V  +E  D +C++L E+  +    D+ E+LL  +  P
Sbjct: 295 KRSKESPNINPSQGPTTFTEGVVDDEEEDALCVNLEEVVKIAGRYDLSEILLVKDSKP 352


>04_03_0811 - 19909128-19912214
          Length = 1028

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +2

Query: 587 TNADYTIKPSELFDNDVYLEEITDVICISLAEIPNLLN-ICDVVEVLLYVNKGPSIISWV 763
           T  +  I P +LF + + LEE+   +C +L E+P  ++ +  ++ + +   K  S+  W+
Sbjct: 414 TQLNINIFPCDLFQDMIKLEELLLSMCSNLEELPRSISALSSLLTLEISGTKLTSLPDWM 473


>03_05_0450 - 24443396-24443501,24443642-24443794,24446213-24446325
          Length = 123

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -2

Query: 342 KSMPESSVSIXXLASAQXLVIXNGDIKAIR-TRHGIMG 232
           KS PE++ +   +A+    ++  GDI AIR T+H I+G
Sbjct: 3   KSPPETAAAAAEVAARFRSLVDTGDIGAIRQTQHLILG 40


>02_05_0668 +
           30749474-30750007,30750818-30751403,30751405-30752497,
           30753105-30753255,30754055-30754870
          Length = 1059

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 587 TNADYTIKPSELFDNDVYLEEITD 658
           T  DYT  P+E  D+DV +EE+ +
Sbjct: 769 TPMDYTPAPTETLDHDVTIEEVEE 792


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,909,624
Number of Sequences: 37544
Number of extensions: 252362
Number of successful extensions: 460
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)