Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_G16
         (796 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR533582-1|CAG38656.1| 1204|Homo sapiens KIAA1287 protein.            144   4e-34
AB033113-1|BAA86601.1| 1209|Homo sapiens KIAA1287 protein protein.    144   4e-34

>CR533582-1|CAG38656.1| 1204|Homo sapiens KIAA1287 protein.
          Length = 1204

 Score =  144 bits (348), Expect = 4e-34
 Identities = 84/217 (38%), Positives = 116/217 (53%)
 Frame = +2

Query: 146 MQPVQPHVFKALKAVXIPGLMXXXXXXXXXXXXXLVRMALISPLXITXYCAEAKXXILTL 325
           +Q V P  F+A++ V +  L              LVRMAL +P   +   A+ K  IL L
Sbjct: 15  LQFVSPFAFEAMQKVDVVCLASLSDPELRLLLPCLVRMALCAPADQSQSWAQDKKLILRL 74

Query: 326 LSGIDLVNFIVSLLSIEFHVLEADVKKEQQMRQKSGSQCIESTLIPNIINGIASDFEQXX 505
           LSG++ VN IV+LLS++FH LE D  KEQQ+R K G    ES L+  + +G+  +FE   
Sbjct: 75  LSGVEAVNSIVALLSVDFHALEQDASKEQQLRHKLGGGSGESILVSQLQHGLTLEFEHSD 134

Query: 506 XXXXXXXXXXXXXQMQAQLVEFNQTKNTNADYTIKPSELFDNDVYLEEITDVICISLAEI 685
                         +   L   N+   +N ++  K SELF++ VYLEE  DV+CI  AE+
Sbjct: 135 SPRRLRLV------LSELLAIMNKVSESNGEFFFKSSELFESPVYLEEAADVLCILQAEL 188

Query: 686 PNLLNICDVVEVLLYVNKGPSIISWVVANQPDMXQEV 796
           P+LL I DV E LL+V  G   +  +VAN PD   EV
Sbjct: 189 PSLLPIVDVAEALLHVRNGAWFLCLLVANVPDSFNEV 225


>AB033113-1|BAA86601.1| 1209|Homo sapiens KIAA1287 protein protein.
          Length = 1209

 Score =  144 bits (348), Expect = 4e-34
 Identities = 84/217 (38%), Positives = 116/217 (53%)
 Frame = +2

Query: 146 MQPVQPHVFKALKAVXIPGLMXXXXXXXXXXXXXLVRMALISPLXITXYCAEAKXXILTL 325
           +Q V P  F+A++ V +  L              LVRMAL +P   +   A+ K  IL L
Sbjct: 20  LQFVSPFAFEAMQKVDVVCLASLSDPELRLLLPCLVRMALCAPADQSQSWAQDKKLILRL 79

Query: 326 LSGIDLVNFIVSLLSIEFHVLEADVKKEQQMRQKSGSQCIESTLIPNIINGIASDFEQXX 505
           LSG++ VN IV+LLS++FH LE D  KEQQ+R K G    ES L+  + +G+  +FE   
Sbjct: 80  LSGVEAVNSIVALLSVDFHALEQDASKEQQLRHKLGGGSGESILVSQLQHGLTLEFEHSD 139

Query: 506 XXXXXXXXXXXXXQMQAQLVEFNQTKNTNADYTIKPSELFDNDVYLEEITDVICISLAEI 685
                         +   L   N+   +N ++  K SELF++ VYLEE  DV+CI  AE+
Sbjct: 140 SPRRLRLV------LSELLAIMNKVSESNGEFFFKSSELFESPVYLEEAADVLCILQAEL 193

Query: 686 PNLLNICDVVEVLLYVNKGPSIISWVVANQPDMXQEV 796
           P+LL I DV E LL+V  G   +  +VAN PD   EV
Sbjct: 194 PSLLPIVDVAEALLHVRNGAWFLCLLVANVPDSFNEV 230


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,394,658
Number of Sequences: 237096
Number of extensions: 1500992
Number of successful extensions: 6126
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6124
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)