Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_G16
         (796 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81067-5|CAD92378.1|  965|Caenorhabditis elegans Hypothetical pr...    34   0.13 
Z67738-5|CAA91547.1|  484|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z67735-4|CAA91533.1|  484|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z83113-3|CAB05545.1|  479|Caenorhabditis elegans Hypothetical pr...    28   6.7  
L23645-7|AAK26132.2|  157|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z81529-12|CAB04303.1|  492|Caenorhabditis elegans Hypothetical p...    28   8.9  
AL023816-5|CAA19434.1|  492|Caenorhabditis elegans Hypothetical ...    28   8.9  

>Z81067-5|CAD92378.1|  965|Caenorhabditis elegans Hypothetical
           protein F23A7.7 protein.
          Length = 965

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 16/58 (27%), Positives = 35/58 (60%)
 Frame = +2

Query: 602 TIKPSELFDNDVYLEEITDVICISLAEIPNLLNICDVVEVLLYVNKGPSIISWVVANQ 775
           +++P  + D+ ++L+   D+I I   +I  +  +C+ VEV++ V K P +I+ +  +Q
Sbjct: 518 SVEPQSITDDTLHLKVNFDLILIIWNQILQIEQVCNAVEVII-VKKAPEMINGIKLHQ 574


>Z67738-5|CAA91547.1|  484|Caenorhabditis elegans Hypothetical
           protein W03G11.4 protein.
          Length = 484

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 611 PSELFDNDVYLEEITDVICISLAEIPNLLNIC--DVVEVLLYVNKGPS 748
           P E+ D  VY  +   V  +S  E+ NLL +C  D +E ++  +  PS
Sbjct: 291 PVEMMDQTVYYYDYDTVSFLSREELINLLMLCEPDQIEDIMVASSFPS 338


>Z67735-4|CAA91533.1|  484|Caenorhabditis elegans Hypothetical
           protein W03G11.4 protein.
          Length = 484

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 611 PSELFDNDVYLEEITDVICISLAEIPNLLNIC--DVVEVLLYVNKGPS 748
           P E+ D  VY  +   V  +S  E+ NLL +C  D +E ++  +  PS
Sbjct: 291 PVEMMDQTVYYYDYDTVSFLSREELINLLMLCEPDQIEDIMVASSFPS 338


>Z83113-3|CAB05545.1|  479|Caenorhabditis elegans Hypothetical
           protein K08H10.6 protein.
          Length = 479

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -2

Query: 708 SQIFSKFGISAKLIHITSVISSKYTSLSNNSEGLIV*SAFV 586
           S I    GISA+ + +T +  +K+  L+N+  GLI   AF+
Sbjct: 138 SGIAFAIGISAQGVFLTEISPAKFRGLTNSLSGLIGNCAFL 178


>L23645-7|AAK26132.2|  157|Caenorhabditis elegans Hypothetical
           protein F54F2.7 protein.
          Length = 157

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +2

Query: 599 YTIKPSELFDNDVYLEEITDVICISLAEIPNLLNICDVVEV 721
           Y+ K SEL+DN  YL   + V  + L  IP      +VVEV
Sbjct: 14  YSRKSSELYDNIAYLHHPSGVTVVVLRNIPE----SEVVEV 50


>Z81529-12|CAB04303.1|  492|Caenorhabditis elegans Hypothetical
           protein T05G11.1 protein.
          Length = 492

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -2

Query: 561 NCACICNSSDRTRRTLLEESDCSKSLAIPLIIFGISVDSMHCDPL 427
           NC C CN S  TRR L+   +C K       +  +++  M  D +
Sbjct: 366 NCRC-CNWSFATRRCLMSHVECLKKAGDARNVKPVAIPRMAADSI 409


>AL023816-5|CAA19434.1|  492|Caenorhabditis elegans Hypothetical
           protein T05G11.1 protein.
          Length = 492

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -2

Query: 561 NCACICNSSDRTRRTLLEESDCSKSLAIPLIIFGISVDSMHCDPL 427
           NC C CN S  TRR L+   +C K       +  +++  M  D +
Sbjct: 366 NCRC-CNWSFATRRCLMSHVECLKKAGDARNVKPVAIPRMAADSI 409


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,365,434
Number of Sequences: 27780
Number of extensions: 247401
Number of successful extensions: 565
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)