Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_G16
         (796 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   3.3  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   4.3  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   7.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   7.5  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   10.0 

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 477 PLIIFGISVDSMHCDPLFCLICCSFF 400
           PL+I G         P  C++C +FF
Sbjct: 176 PLLIMGNEHTYSETGPSHCVVCQNFF 201


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -1

Query: 88  CWEEHTXXQTQRRDXNEQIE 29
           CW EH   Q Q  D   Q E
Sbjct: 330 CWNEHQPLQRQNMDMVAQNE 349


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 698 NICDVVEVLLYVNKGPSIIS 757
           N CD V+ L+    GP ++S
Sbjct: 171 NECDHVQFLITNTSGPGVVS 190


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 698 NICDVVEVLLYVNKGPSIIS 757
           N CD V+ L+    GP ++S
Sbjct: 171 NECDHVQFLITNTSGPGVVS 190


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -1

Query: 88  CWEEHTXXQTQRRDXNEQIE 29
           CW EH   Q +  D   Q E
Sbjct: 330 CWNEHQPLQRENMDMVAQNE 349


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,975
Number of Sequences: 438
Number of extensions: 2997
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)