Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_G15
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    24   0.99 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   9.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.2  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +1

Query: 475 INKSEIEIAACQWMDVDEYL 534
           +++SE+EI AC++  +D  L
Sbjct: 400 LSQSELEITACKFFSIDNAL 419



 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +1

Query: 475 INKSEIEIAACQWMDVDEYL 534
           ++++E+EI AC++  +D  L
Sbjct: 347 LSQNELEITACKFFSIDNAL 366


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +1

Query: 340 IREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLK 459
           I+ V+ E+G++ S  +  + RH+  S      I + ++ K
Sbjct: 270 IKMVLAESGVDTSIYTAHSTRHAATSAAARKGISLDLIRK 309


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 561 PFNSESSSGTPRKE 602
           P + ESSS TPR E
Sbjct: 421 PESPESSSSTPRHE 434


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,651
Number of Sequences: 336
Number of extensions: 3475
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)