Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_G15
(675 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0703 + 27398358-27398466,27398549-27398859,27399044-273991... 111 5e-25
06_03_0848 - 25334701-25334949,25335076-25335184,25335667-253357... 107 1e-23
02_02_0139 + 7122880-7122979,7123328-7123560,7123961-7124032,712... 85 4e-17
04_04_1653 + 35070026-35070064,35070358-35070408,35070490-350705... 41 0.001
02_05_1142 - 34391144-34391590,34391715-34391904,34392058-343921... 39 0.003
06_01_0296 - 2156895-2157160,2157435-2157527,2157932-2158031,215... 36 0.022
05_02_0108 + 6681656-6681944,6682041-6682183,6682548-6682610 34 0.12
02_05_1236 + 35141404-35142731,35142753-35143089,35143228-351433... 33 0.21
09_06_0215 - 21621889-21621949,21622275-21622333,21622442-216225... 31 0.64
01_06_1839 - 40245862-40246022,40246872-40246977,40247868-402479... 31 1.1
04_03_0797 + 19744815-19745030,19745190-19745273,19745375-197454... 30 1.5
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 30 1.9
07_03_0987 - 23155134-23155693,23155781-23157023 29 2.6
06_02_0265 - 13586552-13587985 29 3.4
12_01_1112 - 11866376-11866447,11866528-11866662,11866772-118669... 29 4.5
06_01_0206 - 1573796-1574071,1574580-1574678,1574859-1574951,157... 29 4.5
04_03_0933 + 20906482-20906660,20907770-20907832,20910028-209101... 29 4.5
10_08_0373 - 17286104-17288839 28 5.9
07_01_0985 - 8297560-8297610,8297728-8297939,8298327-8298449,829... 28 5.9
02_04_0300 + 21784634-21784691,21784784-21784893,21787486-217877... 28 5.9
10_08_0521 + 18500105-18500529,18501216-18501284,18501467-185015... 28 7.8
>04_04_0703 +
27398358-27398466,27398549-27398859,27399044-27399109,
27399196-27399258,27399304-27399444,27399535-27399612,
27399688-27399738,27399829-27399863,27399982-27400090,
27400235-27400441
Length = 389
Score = 111 bits (267), Expect = 5e-25
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 3/139 (2%)
Frame = +1
Query: 136 SFVMMYKWLPTNSKANLPPACHTNLGVGGMVFNSQNQILVVVEQHTDIV---HWKLPGGY 306
++VM+ W+P LP +GVGG V N Q ++LVV E++ WKLP G+
Sbjct: 194 AYVMLTYWIPHEEPCMLPANASHQVGVGGFVINDQMEVLVVQEKYCGSSLDGAWKLPTGF 253
Query: 307 VERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKAISDTINKS 486
+ E+I REV EETG++ F +V RH+HN F SD++ + ML+ S+ I
Sbjct: 254 ILASEEIFTGATREVKEETGVDTEFVDVVAFRHAHNVAFQKSDLFFICMLRPTSNNIKID 313
Query: 487 EIEIAACQWMDVDEYLNHP 543
E EI A +WM ++E++ P
Sbjct: 314 ETEIQAAKWMPLEEFVKQP 332
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 15 SLKKWSEQNKRCIWFKVNIKHADWVPILAK 104
SL W K+ +W K+ + +++VPI K
Sbjct: 133 SLSYWKSVGKKGVWLKLPVDRSEFVPIAVK 162
>06_03_0848 -
25334701-25334949,25335076-25335184,25335667-25335701,
25335793-25335843,25335941-25336018,25336214-25336351,
25336664-25336729,25337387-25337572
Length = 303
Score = 107 bits (256), Expect = 1e-23
Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 5/151 (3%)
Frame = +1
Query: 136 SFVMMYKWLPTNSKANLPPACHTNLGVGGMVFNSQNQILVVVEQH---TDIVHWKLPGGY 306
+++M+ WLP + LP +GVG V N + ++L V E+ + WK P G
Sbjct: 95 TYLMLAYWLPATTHT-LPVNATHRVGVGAFVMNDKREVLAVQEKSGVLRGLGVWKFPTGV 153
Query: 307 VERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKAISDTINKS 486
VE GEDI +REV EETGI+ F ++ R SH + F SD++ V +L+ +S I K
Sbjct: 154 VEPGEDINLGAVREVKEETGIDTEFVEVLAFRQSHKAFFDKSDLFFVCILRPLSFDITKQ 213
Query: 487 EIEIAACQWMDVDEYLNHPNV--HEFNRSIV 573
+ EI A QWM V+E+ P V HE + I+
Sbjct: 214 DSEIEAAQWMPVEEFAAQPFVQKHELVKYIL 244
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 6 LNHSLKKWSEQNKRCIWFKVNIKHADWVPILAKAGFDFHHSRXQF 140
L SL KW EQ R +W K+ I A+ + + GF +HH+ +
Sbjct: 52 LKASLSKWREQGIRGVWIKLPISLANLIQYAVEEGFWYHHAEETY 96
>02_02_0139 +
7122880-7122979,7123328-7123560,7123961-7124032,
7124257-7124334,7124529-7124579,7124654-7124703,
7124807-7124915,7125023-7125223
Length = 297
Score = 85.4 bits (202), Expect = 4e-17
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Frame = +1
Query: 181 NLPPACHTNLGVGGMVFNSQNQILVVVEQHTDIVH----WKLPGGYVERGEDIKDAVIRE 348
NL C T + +GG+ +S ++VV++ H WK+P G++++ ED+ IRE
Sbjct: 114 NLNFICFT-IFLGGLCLSSCRARVLVVKEGKCPSHCSDIWKIPTGFIDKFEDLFSGAIRE 172
Query: 349 VMEETG-----IEASFDSIVTLRHSHNSMFGNSDIYIVVMLKAISDTINKSEIEIAACQW 513
V EETG IE+ F +V RH+H +F SDI + LK +S I+ E EI A +W
Sbjct: 173 VREETGNSTFQIESCFLDVVAFRHAHQVLFDKSDILFICTLKPLSSDISIDESEIEAARW 232
Query: 514 MDVDEYLNHP 543
M V+E+++ P
Sbjct: 233 MPVEEFVSQP 242
>04_04_1653 +
35070026-35070064,35070358-35070408,35070490-35070582,
35070758-35070855,35072437-35072551,35072628-35072720
Length = 162
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 247 ILVVVEQHTDIVH-WKLPGGYVERGEDIKDAVIREVMEETGIEAS 378
IL+ DI + W++P G ++ GED ++A RE+ EETG+ ++
Sbjct: 12 ILIFTASRIDIANTWQMPQGGIDAGEDPREAAFRELREETGVTSA 56
>02_05_1142 -
34391144-34391590,34391715-34391904,34392058-34392128,
34392403-34392515,34392656-34392749,34392843-34392908,
34393120-34393282,34393441-34393547,34393918-34394115,
34394204-34394329,34394800-34394904,34395056-34395098,
34395334-34395391,34395479-34395659,34395751-34395917,
34396010-34396249,34396341-34396781,34397147-34397272,
34397457-34397561,34397935-34398002,34398169-34398272,
34398856-34399008,34399472-34399570,34399919-34400046,
34400149-34400300,34400423-34400502
Length = 1274
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +1
Query: 217 GGMVFNSQNQILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVT 396
G ++ + + ++V+ W P G + E+ +REV+EETG + S ++
Sbjct: 110 GAIILDDTYEKCLLVKGWKSSASWSFPRGKRSKDEEDHTCAVREVLEETGCDVS--KLLK 167
Query: 397 LR-HSHNSMFGNS-DIYIVVMLKAISDTINKSEIEIAACQWMDVDEYL 534
L + SM+ +YI+ +K + +++ EI+ W ++DE L
Sbjct: 168 LEDYIEVSMWQQRVRLYIITGVKGDTVFAPQTKKEISEISWHNIDELL 215
>06_01_0296 -
2156895-2157160,2157435-2157527,2157932-2158031,
2158634-2158738,2158832-2158972,2159056-2159568
Length = 405
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 223 MVFNSQNQILVVVEQHTDIVH-WKLPGGYVERGEDIKDAVIREVMEETGIE 372
+V + +N ++ Q + W G++E GE +++AV RE EETGI+
Sbjct: 223 LVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIQ 273
>05_02_0108 + 6681656-6681944,6682041-6682183,6682548-6682610
Length = 164
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 292 LPGGYVERGE-DIKDAVIREVMEETGIEASFDSIVTL 399
LPGG VE G+ D +RE EE G++ + SIVT+
Sbjct: 101 LPGGKVEEGDADATATALREAKEEIGLDPALVSIVTV 137
>02_05_1236 +
35141404-35142731,35142753-35143089,35143228-35143305,
35143395-35143703,35144449-35144572,35144620-35144789
Length = 781
Score = 33.1 bits (72), Expect = 0.21
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 274 DIVHWK-LPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDI 438
D V W L GG+V G + V+ E MEE G EA +IVT+ S +GN D+
Sbjct: 299 DTVAWTALIGGFVRAGRYKEAVVLFEEMEEAGFEADEATIVTVL-SACVGYGNIDL 353
>09_06_0215 -
21621889-21621949,21622275-21622333,21622442-21622582,
21622669-21622804,21623266-21623342,21623594-21623725,
21624915-21624938,21626147-21626365,21626401-21626718
Length = 388
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 286 WKLPGGYVERGEDIKDAVIREVMEE 360
W LP GY+E GE + RE +EE
Sbjct: 257 WTLPAGYLEVGESAAEGASRETLEE 281
>01_06_1839 -
40245862-40246022,40246872-40246977,40247868-40247949,
40248337-40248437,40248531-40248568,40248624-40248675
Length = 179
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +1
Query: 361 TGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKAISDTINKSEIEIAACQWMDVDEYLNH 540
TG EA D + T R S ++ +Y+ + + + + ++ AAC W+ V +N
Sbjct: 56 TGAEAETDRVST-RESSEKWSASAYVYLQWLGRTAATVCCRQKLASAACAWLTVFVLIND 114
Query: 541 PNVHEFN 561
E N
Sbjct: 115 AKARESN 121
>04_03_0797 +
19744815-19745030,19745190-19745273,19745375-19745473,
19745588-19745695,19747332-19747700
Length = 291
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 247 ILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHS 408
++V D+V K GG+ E ED+ +A RE MEE G++ + + + R++
Sbjct: 58 LMVSTPNRADLVFPK--GGW-EDDEDVYEAACREAMEEAGVKGNINVMSLYRNN 108
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 268 HTDIVHWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIV 447
+++I+H G +ER E++ +RE MEE GI+A D ++ H + + + +V
Sbjct: 405 YSNIIHAHCQSGNMERAEEL----VRE-MEEDGIDAPIDVYHSMMHGYTIIQNENKCLVV 459
>07_03_0987 - 23155134-23155693,23155781-23157023
Length = 600
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 364 GIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKAISDTINKSEIEIA 501
G+ S S+VTLR HN G+ V M+++ + + N + EI+
Sbjct: 136 GLRVSLPSLVTLRAEHNGFHGDLRALSVPMVRSFNVSRNMLDGEIS 181
>06_02_0265 - 13586552-13587985
Length = 477
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 241 NQILVVVEQHTDI-VHWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHS 408
N++ +V E I V PG V+ DI DA++R +ME + + ++ ++ S
Sbjct: 386 NKVFIVEEMKIGIEVRGYKPGALVQA--DIVDAILRRIMESDAQQGVLERVMAMKES 440
>12_01_1112 -
11866376-11866447,11866528-11866662,11866772-11866921,
11867263-11867338,11867426-11867559,11867655-11867747,
11868456-11868589,11868696-11868744,11869271-11869441,
11870291-11870452
Length = 391
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 586 PELDSLLNG*IHVHLDD*DTHQHPSTD 506
P+L + L I++HL + +T +HPSTD
Sbjct: 154 PQLCATLASDIYMHLREAETRKHPSTD 180
>06_01_0206 -
1573796-1574071,1574580-1574678,1574859-1574951,
1575036-1575128,1575638-1575715,1575833-1576051
Length = 285
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +1
Query: 289 KLPGGYV--ERGEDIKDAVIREVMEETGIEASFDSIVTL 399
+LP G + E+G+ + AV REV EETGI+ + + ++ L
Sbjct: 141 ELPAGMLDDEKGDFVGTAV-REVEEETGIKLNLEDMIDL 178
>04_03_0933 +
20906482-20906660,20907770-20907832,20910028-20910144,
20910433-20910688,20910788-20910946,20911052-20911203,
20911310-20911454
Length = 356
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +1
Query: 157 WLPTNSKANLPPACHTNLGVGGMVFNSQNQILVVVEQHTDIVHWKL 294
WL +K + CH ++ +F + ++ + H D+ HW+L
Sbjct: 201 WLVIQAKVSKVYPCHYSIAAMVCLFGALQSTVMALCVHRDMEHWRL 246
>10_08_0373 - 17286104-17288839
Length = 911
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +1
Query: 274 DIVHWK-LPGGYVERGEDIKDAVIREVMEETGIE---ASFDSIVTLRHSHNSMFGNSDIY 441
D+V W L G Y + GE + + E M+E+G+ S++++V+ + + ++
Sbjct: 151 DVVAWTALVGAYADAGELGEAFELFETMQESGVRPDVISWNTLVSGFARNGDLRAALHLF 210
Query: 442 IVVMLKAISDTINKSEIEIAAC-QWMDVDEYLN 537
+ L+ + +N I+ C Q DE LN
Sbjct: 211 DEMRLRGVKPGVNSWNCIISGCVQNARYDEALN 243
>07_01_0985 -
8297560-8297610,8297728-8297939,8298327-8298449,
8298763-8298817,8299940-8300077,8300187-8300261,
8300339-8300398,8301335-8301392,8301948-8302054,
8302484-8302558,8302643-8302838,8304222-8304301,
8308887-8309757,8310672-8310679
Length = 702
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +1
Query: 211 GVGGMVFNSQNQILVVVEQHTDIVHW 288
G GG+V N++L +V++H+ ++ W
Sbjct: 311 GPGGVVSKPTNELLTMVKKHSHLIGW 336
>02_04_0300 +
21784634-21784691,21784784-21784893,21787486-21787771,
21788292-21788472,21788978-21789195,21789511-21789631,
21789703-21789800,21789894-21790105,21790199-21790311,
21790404-21790499,21790626-21790841,21790958-21791099,
21791280-21791525,21792078-21792389
Length = 802
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 334 AVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIY---IVVMLKAISDTINKSEIEIAA 504
AVI ++ + G+E ++++ L G + Y + ++ +A+ +T+N+ + +A
Sbjct: 546 AVIDDLFDVGGLEQEQENLLALMEKWEEP-GEDEYYSEDVKIVFQALYNTVNEIGAKASA 604
Query: 505 CQWMDVDEYL 534
Q DV +YL
Sbjct: 605 LQGHDVTKYL 614
>10_08_0521 +
18500105-18500529,18501216-18501284,18501467-18501555,
18501726-18501838,18502023-18502124,18502576-18502663,
18502795-18503361,18503766-18504149,18504168-18504384,
18504466-18504548,18505174-18505256,18505796-18506032,
18506481-18506658,18506814-18507328,18507740-18507916,
18508385-18508768,18508885-18509031
Length = 1285
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 88 CPYLPRLDLISITPGXSFVMMYKWLPTNSKAN 183
C + R DL +T S + Y+WLP NS +
Sbjct: 246 CEHEWRQDLSVVTKWLSGISPYRWLPANSSTS 277
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,572,313
Number of Sequences: 37544
Number of extensions: 324681
Number of successful extensions: 715
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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