Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_G15
(675 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 3e-25
SB_39655| Best HMM Match : NUDIX (HMM E-Value=1e-22) 111 7e-25
SB_44012| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_43830| Best HMM Match : NUDIX (HMM E-Value=2.8e-09) 40 0.002
SB_27016| Best HMM Match : NUDIX (HMM E-Value=1.4e-16) 40 0.002
SB_56731| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.052
SB_18314| Best HMM Match : NUDIX (HMM E-Value=2e-05) 35 0.052
SB_14414| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_34205| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_48435| Best HMM Match : Ion_trans (HMM E-Value=1.7e-11) 31 0.85
SB_57999| Best HMM Match : DUF512 (HMM E-Value=1.2) 29 2.6
SB_23855| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 112 bits (269), Expect = 3e-25
Identities = 54/131 (41%), Positives = 77/131 (58%)
Frame = +1
Query: 136 SFVMMYKWLPTNSKANLPPACHTNLGVGGMVFNSQNQILVVVEQHTDIVHWKLPGGYVER 315
+F+++ +WLP + +LP T +GV G V Q+LVV E+ HWKLPGG +
Sbjct: 26 TFIVVTQWLPKDEPNSLPTFATTYIGVAGFVVRDDGQLLVVKERFRTQDHWKLPGGMADY 85
Query: 316 GEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKAISDTINKSEIE 495
EDI++ REV+EETGIEA F S+V +RH + FG SD+Y V ++ S I E
Sbjct: 86 NEDIRETARREVLEETGIEAEFVSLVCIRHIPDFRFGCSDLYFVCLMTPKSTEIKFDAKE 145
Query: 496 IAACQWMDVDE 528
IA +WM+ +
Sbjct: 146 IADAKWMETSQ 156
>SB_39655| Best HMM Match : NUDIX (HMM E-Value=1e-22)
Length = 322
Score = 111 bits (266), Expect = 7e-25
Identities = 59/141 (41%), Positives = 81/141 (57%), Gaps = 9/141 (6%)
Frame = +1
Query: 145 MMYKWLPTNSKANLPPACHTNLGVGGMVFNSQ-NQILVVVEQHTDIVH------WKLPGG 303
M+ KWLP N + +PP +GV G+V N + N++LVV ++ + WK PGG
Sbjct: 113 MLLKWLPDNVECKVPPYASHQIGVAGIVVNEEENKVLVVQDRQKYKMGVLKKPIWKFPGG 172
Query: 304 YVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSH--NSMFGNSDIYIVVMLKAISDTI 477
+ GEDI REV EETGI++ F SIV R H S F SDI++V +K ++ I
Sbjct: 173 LSDEGEDIGHTAEREVFEETGIKSEFQSIVLFRQQHKMRSAFNKSDIFVVCRMKPLTSDI 232
Query: 478 NKSEIEIAACQWMDVDEYLNH 540
+ EIAACQWM ++E L H
Sbjct: 233 ILCDDEIAACQWMPINELLVH 253
Score = 31.1 bits (67), Expect = 0.85
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 6 LNHSLKKWSEQNKRCIWFKVNIKHADWVPILAKAGFDFHHS 128
L + + R +W KV + + +P++ K GF +HH+
Sbjct: 67 LKDCIVQCKSNGNRAMWVKVPVDKSYLIPVVFKHGFTYHHA 107
>SB_44012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1
Query: 319 EDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVML 456
EDI++ REV+EETGIEA F S+V +RH + FG SD+Y V ++
Sbjct: 2 EDIRETARREVLEETGIEAEFVSLVCIRHIPDFRFGCSDLYFVCLM 47
>SB_43830| Best HMM Match : NUDIX (HMM E-Value=2.8e-09)
Length = 416
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 214 VGGMVFNSQNQILVVVE-QHTDIVHWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSI 390
V ++ +IL++ E + + + W LP G +E+ E + REV+EETG+E ++
Sbjct: 311 VAAVIIREDGKILMMREAKESCLGKWYLPAGRLEKNESLVQGAKREVIEETGLEFEPSTM 370
Query: 391 VTLRHSHNSMFGN 429
+ + +++FGN
Sbjct: 371 ICI----DTVFGN 379
>SB_27016| Best HMM Match : NUDIX (HMM E-Value=1.4e-16)
Length = 454
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 214 VGGMVFNSQNQILVVVE-QHTDIVHWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSI 390
V ++ +IL++ E + + + W LP G +E+ E + REV+EETG+E ++
Sbjct: 185 VAAVIIREDGKILMMREAKESCLGKWYLPAGRLEKNESLVQGAKREVIEETGLEFEPSTM 244
Query: 391 VTLRHSHNSMFGN 429
+ + +++FGN
Sbjct: 245 ICI----DTVFGN 253
>SB_56731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 35.1 bits (77), Expect = 0.052
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 247 ILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVMEE 360
+LV +H D W +P G +E GE+ K+ IREV EE
Sbjct: 117 LLVSSSKHPD--KWVVPAGGIEPGEEPKETAIREVQEE 152
>SB_18314| Best HMM Match : NUDIX (HMM E-Value=2e-05)
Length = 169
Score = 35.1 bits (77), Expect = 0.052
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 247 ILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVMEE 360
+LV +H D W +P G +E GE+ K+ IREV EE
Sbjct: 82 LLVSSSKHPD--KWVVPAGGIEPGEEPKETAIREVQEE 117
>SB_14414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 462
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 298 GGYVERGEDIKDAVIREVMEETG 366
GG+V+ GED++ AV REV EE G
Sbjct: 344 GGFVDDGEDLETAVNREVQEEMG 366
>SB_34205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 145 MMYKWLPTNSKANLPPACHTNLGVGGMVFNSQNQILVVVE-QHTDIVHWKLPGGYVERGE 321
++ +W P ++ + N G + + ++L V Q +D W +PGG +E G+
Sbjct: 515 LLGRWGPNHAADPIVTRWKRNPDTGQPLVLAGKRVLEFVAIQRSDTKEWAIPGGMMEVGD 574
Query: 322 DIKDAVIREVMEE 360
I + +E EE
Sbjct: 575 TISKTLKKEFFEE 587
>SB_48435| Best HMM Match : Ion_trans (HMM E-Value=1.7e-11)
Length = 1496
Score = 31.1 bits (67), Expect = 0.85
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +1
Query: 175 KANLPPACHTNLGVGGMVFNSQNQILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVM 354
K LP T+ GV M+ + + V Q D W +PGG VE G+ + A+ E
Sbjct: 1137 KDGLPLWKRTSAGV--MLQGGKKVLEFVAIQRKDNNQWAIPGGMVEPGQLVTQALKAEFG 1194
Query: 355 EE 360
EE
Sbjct: 1195 EE 1196
>SB_57999| Best HMM Match : DUF512 (HMM E-Value=1.2)
Length = 247
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 100 PRLDLISITPGXSFVMMYKWLPTNSKANLPPACHT 204
PR L + TPG F+ Y +LPT L AC T
Sbjct: 84 PRTTLSARTPGLDFLRSYLFLPTVLLTQLIYACRT 118
>SB_23855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = -1
Query: 573 HY*TVKFMYI---WMIKILINIHPLTGCYFNF*FVDSIRNRF*HNYY--VNIRISKHRIV 409
+Y T+ +Y+ WM+ HP+ C+ + D R F H ++ N S+ R+
Sbjct: 339 YYSTLNKVYVFCVWMVFFNSVCHPIVYCFIGKQYRDEARALF-HRFFPKKNYNNSRLRLT 397
Query: 408 TVPQSYN 388
+VP + N
Sbjct: 398 SVPSTNN 404
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,533,995
Number of Sequences: 59808
Number of extensions: 377955
Number of successful extensions: 838
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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