Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_G14
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    26   0.35 
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   3.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.3  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   7.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.6  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 632 INHPTTSSRGQSLTRVTSGEDSERDRTY 715
           + H  T   GQS+  +TS +D +R R Y
Sbjct: 136 LGHLQTDLMGQSIFNITSPDDHDRLRMY 163


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 85  LAIAVTIHVIFSWWIVSVF 29
           L  A+TI   FSW  + VF
Sbjct: 90  LVHAITIRSTFSWTFIDVF 108


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 481 EGSHYGRRKFTGSE 522
           +  HYGRR+ +GSE
Sbjct: 796 QSHHYGRRERSGSE 809


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 467 VELRSPVACRCF 432
           V+LR P  C+C+
Sbjct: 117 VKLREPAECKCY 128


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 143 NYTQPPTSRANERRPIGLDRMVPG 214
           N T PPT++       GLD   PG
Sbjct: 431 NQTPPPTAQMGLDMVTGLDVKPPG 454


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,238
Number of Sequences: 336
Number of extensions: 3339
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)