Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_G14
(717 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 33 0.031
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 29 0.66
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 28 1.2
SPBC19C7.06 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 28 1.5
SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit ... 27 2.0
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 27 2.0
SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr ... 27 2.0
SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual 27 3.5
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 27 3.5
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 26 4.7
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.2
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 26 6.2
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 6.2
SPBC106.08c |mug2||DUF1773 family protein 1|Schizosaccharomyces ... 25 8.2
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 8.2
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 33.5 bits (73), Expect = 0.031
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Frame = +2
Query: 398 RTQPRNVIGARESNDMPPDYGAP-PEXQQREVTMEGENLQDLSVISSTEMTFSREQIL-- 568
R PR + R ++ PP P P QRE + +N++ S T + QI+
Sbjct: 55 RRLPRKPLPFRSTSLQPPSSQPPAPPTHQREASPV-KNIEHSESFPSVFGTSNNHQIVPL 113
Query: 569 ---DGADTTLTEAALDRNTDASDSINHPTTSSRGQSLT-RVTSGEDSERD 706
DG D A+L+ NH +S SLT +SG+DS ++
Sbjct: 114 TLKDGNDFGALYASLNTTPHFPQVSNHAPNNSNSPSLTWHTSSGDDSNQN 163
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 29.1 bits (62), Expect = 0.66
Identities = 16/71 (22%), Positives = 32/71 (45%)
Frame = +2
Query: 344 SDIREQNVDGSDYSEQALRTQPRNVIGARESNDMPPDYGAPPEXQQREVTMEGENLQDLS 523
S +R +N+D + + Q + + A + P YG P + + E EN + S
Sbjct: 32 SSVRRKNIDSNGLQQTNQIEQAESSLNAEADHSEPERYGCTPSGKVFLLPKEQENRR--S 89
Query: 524 VISSTEMTFSR 556
++ + + FS+
Sbjct: 90 ILETVDPRFSK 100
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +2
Query: 206 VPGEPSNDQYQAGNYPQYQGTNYAVSEQRIVTGFDHDFQLRLDAGPSDIREQNVDGSDYS 385
+P EP Q Y + + +V EQ T D D + + +DI + N G D S
Sbjct: 86 IPNEPEIPDMQ-DEYSRDSHSQQSVEEQNNTTNTDEDASVNEFSVAADISDVNTLGKDNS 144
Query: 386 E 388
E
Sbjct: 145 E 145
>SPBC19C7.06 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 716
Score = 27.9 bits (59), Expect = 1.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 496 HSDFPLLXFRWSSVVRW 446
H D PL +W+SVVRW
Sbjct: 328 HRDLPLKLNQWNSVVRW 344
>SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit
Bdp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 507
Score = 27.5 bits (58), Expect = 2.0
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 458 GAPPEXQQREVTMEGENLQDLS--VISSTEMTFSREQILDGADTTLTEAALDRNTDASDS 631
GA RE +++ Q LS ++ S+E +E+I+ +L E D + DS
Sbjct: 226 GASTASSSREASLDSTIKQPLSASLLESSEPK-EKEEIVG----SLEEEGTDESASLEDS 280
Query: 632 INHPTTS 652
++HPT S
Sbjct: 281 LSHPTKS 287
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 156 LLLAEQTKEDQLAWIEWFQASQATTSIKLA 245
L+L E+ KED ++W+E Q I LA
Sbjct: 1083 LVLREKKKEDPISWMEGTMEDQTPDDISLA 1112
>SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 727
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/70 (24%), Positives = 29/70 (41%)
Frame = +2
Query: 77 DGQPTDNSSRPYRQADGQQTPDNYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQ 256
DG +S + + ++ D++T PP NE + + P PS+ + A N
Sbjct: 116 DGDSKKHSLQLQEEEKSSESLDSHTHPPKRVRNEDDSLTFSKTSPVSPSSLKDGASNTVT 175
Query: 257 YQGTNYAVSE 286
+N SE
Sbjct: 176 NDASNKIKSE 185
>SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual
Length = 426
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 227 RCLARLEPFYPSQLVFFRLLC**EAVCN 144
+CL L PF+ +Q + F+L C A CN
Sbjct: 261 KCLIILVPFFYNQYLGFKLFCPGVAWCN 288
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 26.6 bits (56), Expect = 3.5
Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Frame = +2
Query: 62 MDRHGDGQPTDNSSRPYRQADGQQTPDNYTQPPTSRANERRPIGLDRMVPGEPSNDQYQA 241
+ R G P+ + P + P N + P R PI + +P N+ + A
Sbjct: 552 LKRSSIGTPSQQAYFPDAPHNCHSVPQNSSYPRPPMQVNRSPIDSMQTIPHANFNEMHNA 611
Query: 242 --GNYP-QYQGTNYAVSEQRIVTGFDHDFQLRLDAGPSDIRE 358
YP +Y + AVS ++ ++ L PSD +
Sbjct: 612 YSSRYPLKYSKSCNAVSHTSMMHPQEYGGSLPSSTVPSDYNQ 653
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 26.2 bits (55), Expect = 4.7
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 92 DNSSRPYRQADGQQTPDNYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQYQGTN 271
DN + PYR+ + P +YT+ R+ R G +R P+ Q+ +G ++ TN
Sbjct: 210 DNGADPYRRDKFGKLPTDYTKDENMRSLLRSYSG-NRDSSSAPAVPQHMSGYLKKW--TN 266
Query: 272 Y 274
Y
Sbjct: 267 Y 267
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.8 bits (54), Expect = 6.2
Identities = 20/85 (23%), Positives = 33/85 (38%)
Frame = +2
Query: 272 YAVSEQRIVTGFDHDFQLRLDAGPSDIREQNVDGSDYSEQALRTQPRNVIGARESNDMPP 451
YA + GF H + D + + D S+YS +R R +ND
Sbjct: 2368 YAFPNRNESDGFPHIYSRNHDKRKENGSQGEADNSNYSGSLMR---------RRTNDQEE 2418
Query: 452 DYGAPPEXQQREVTMEGENLQDLSV 526
D A P +R+ + +L D ++
Sbjct: 2419 DALATPSSSRRDSRSKRASLIDFTI 2443
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 25.8 bits (54), Expect = 6.2
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +3
Query: 144 ITHSLLLAEQTKEDQLAWIEWFQASQATTSIKLAIILNIREQTTQLANKGSSLASITIFS 323
I +S +L + + W + + + + II++ +T L +GSS SI +FS
Sbjct: 1004 IGNSTVLVRLPPSELKESVTWIKEAPPSNFLTWEIIISDLTRTYHLIPRGSSTVSIILFS 1063
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 6.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 92 DNSSRPYRQADGQQTPDNYTQPPTSRANERRPIGLDRMVPGEPSNDQ 232
DN+S+P + ++T + +P TS IG D P E N++
Sbjct: 109 DNTSKPSANSSAERTSSQHQKPETS-----SQIGKDNAAPVENVNEK 150
>SPBC106.08c |mug2||DUF1773 family protein 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 296
Score = 25.4 bits (53), Expect = 8.2
Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
Frame = +2
Query: 266 TNYAVSEQRIVTGFDHDFQLRLDAGPSDI--REQNVDGSDYSEQALRTQPRNVIGARESN 439
TN +E+ IV + +D + + E +VD +DY QAL T N
Sbjct: 33 TNMLSTEENIVKAKAVSRKKPVDVSYAGLARHESHVD-TDYHGQALNTD----------N 81
Query: 440 DMPPDYGAPPEXQQREVTMEGENLQDLSVISSTEMTFSREQI--LDGADTTLTEAALDRN 613
P +Y A ++ E+ E+ QD ++ QI L +D T TE ++
Sbjct: 82 QDPKNYQARSFVKENELY---ESSQDCGHSRLAQILSEENQIKRLPQSDNTTTERIIE-- 136
Query: 614 TDASDSINHPTTSSRGQSLTRVTSGEDS 697
N+P S++ L R SGE+S
Sbjct: 137 -------NNPNYSNKPSKLKRALSGENS 157
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.4 bits (53), Expect = 8.2
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +2
Query: 89 TDNSSRPYRQADGQQTPDNYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGN 247
T +S R + TPD++ P ++ + P G P + + AGN
Sbjct: 282 TGSSYRSAESSHAPTTPDHFKLTPLTKLEPQPPSGSPSKKPVSELEELHTAGN 334
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,824,437
Number of Sequences: 5004
Number of extensions: 57240
Number of successful extensions: 182
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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