Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_G14
(717 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0702 - 26934736-26935551,26937494-26937538,26938484-26938594 33 0.17
09_04_0500 - 18120287-18122233 33 0.30
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 32 0.40
08_02_1080 - 24197514-24199415 32 0.40
03_02_0114 + 5704002-5704037,5704547-5704666,5705040-5705076,570... 30 1.6
08_02_0550 + 18509365-18509589,18509668-18510644,18510828-185118... 30 2.1
02_02_0265 - 8405936-8406367,8406488-8406940,8407073-8407335,840... 30 2.1
06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866 29 2.8
04_04_1523 - 34148407-34150224 29 2.8
02_05_1326 - 35712102-35712473,35712608-35712720,35712944-357148... 29 2.8
04_03_0448 - 16020773-16021066,16023040-16023291,16023470-160236... 29 3.7
01_06_1259 - 35810926-35811777 29 4.9
12_02_0781 + 23105554-23106855,23107191-23107511,23107581-231076... 28 6.4
05_06_0005 + 24802843-24803101,24804086-24804333,24804417-248045... 28 6.4
04_04_1410 + 33363784-33364086,33364221-33364280,33364388-333644... 28 6.4
02_05_0167 - 26415319-26415494,26415591-26415840,26415909-264159... 28 6.4
11_06_0325 + 22376195-22377001,22377136-22377525,22377638-223777... 28 8.5
11_04_0444 + 17816207-17817436 28 8.5
09_06_0260 - 21911358-21911438,21911715-21911828,21911911-219120... 28 8.5
08_01_0889 + 8753877-8754236,8754995-8755054,8755174-8755250,875... 28 8.5
04_03_0103 + 11288977-11290353,11291962-11292075,11294987-112954... 28 8.5
03_06_0424 + 33837032-33837634 28 8.5
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 8.5
02_02_0271 + 8445823-8445994,8446206-8446468,8446583-8447053,844... 28 8.5
01_01_1174 + 9348256-9349734 28 8.5
>03_05_0702 - 26934736-26935551,26937494-26937538,26938484-26938594
Length = 323
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +2
Query: 65 DRHGDGQPTDNSSRPYRQADGQQTPDNYTQPPTSRANERRPIGLDRMVPGEPSN-DQYQA 241
DR GD D YR+ D Y AN+R P G DR VP D+YQ
Sbjct: 173 DRFGDRYMDDRYDGGYREP--VDVRDRYGGGRDRYANDRYPSGGDRYVPDRYGGPDRYQP 230
Query: 242 GNYPQYQGTNYAVSEQRIVTGFD 310
+Y + + +Y R G+D
Sbjct: 231 SSYGRERERSYERDGVRGNGGYD 253
>09_04_0500 - 18120287-18122233
Length = 648
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 129 SKLLIITHSLLLAEQTKEDQLAWIEWFQASQATTSIKLAIILNI 260
++L+ I H L L E ++ WI W QAS T +L I N+
Sbjct: 326 TELIPIDHGLCLPESLEDPYFEWIHWPQASIPFTEEELEYIANL 369
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 458 GAPPEXQQREVTMEGENLQDLSVISSTEMTFSREQILDGADTTLTEAALDRNTDA 622
G E + V +EG L I + +TFS Q+ A T+ AAL + DA
Sbjct: 615 GTSSEGSSKSVNVEGARRMALKHIQTFVLTFSDPQVFTTASTSSASAALSQIADA 669
>08_02_1080 - 24197514-24199415
Length = 633
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 120 QTVSKLLIITHSLLLAEQTKEDQLAWIEWFQASQATTSIKLAIILNI 260
+T ++L+ I H L L E ++ WI W QAS + L I N+
Sbjct: 323 ETQTELIPIDHGLCLPESLEDPYFEWIHWPQASIPFSEEDLEYITNL 369
>03_02_0114 +
5704002-5704037,5704547-5704666,5705040-5705076,
5705905-5705981,5706642-5706755,5706902-5706969,
5707051-5707129,5707367-5707511,5707627-5707731,
5707917-5707994,5708192-5708247,5708533-5708651,
5708853-5709096,5709203-5709385,5709956-5710264,
5710350-5710399,5711042-5711102,5711184-5711267,
5711461-5711577,5711665-5711831,5711938-5712010,
5712497-5712581,5712693-5712886,5713073-5713228
Length = 918
Score = 30.3 bits (65), Expect = 1.6
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 3/135 (2%)
Frame = +2
Query: 308 DHDFQLRLDAGPSDIREQNVDGSDYSEQALRTQ---PRNVIGARESNDMPPDYGAPPEXQ 478
D+D D+G +I E D ++YS RN G + SN + P +
Sbjct: 453 DNDVDGSYDSGEDNIEEDMEDDTEYSSGGSECDDKVKRNNSG-KASNGNDKGFQPPKKAA 511
Query: 479 QREVTMEGENLQDLSVISSTEMTFSREQILDGADTTLTEAALDRNTDASDSINHPTTSSR 658
+ E + E+ +S + E T S+ + D + L E+ + +TD + N +SSR
Sbjct: 512 RTEHGVLREDTNQISSVPPVENT-SQMESNDPSHRKLHES--NGSTDQIEKSNVRASSSR 568
Query: 659 GQSLTRVTSGEDSER 703
+ + + +S S++
Sbjct: 569 AKFMEKSSSRNKSKK 583
>08_02_0550 +
18509365-18509589,18509668-18510644,18510828-18511802,
18511885-18512142,18512216-18512326,18512418-18512496,
18512595-18512687,18512773-18512958
Length = 967
Score = 29.9 bits (64), Expect = 2.1
Identities = 31/134 (23%), Positives = 56/134 (41%)
Frame = +2
Query: 143 NYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQYQGTNYAVSEQRIVTGFDHDFQ 322
N QP +ANE PIGL + S+ +AG+ + ++ S R G D +
Sbjct: 5 NEAQPAGDKANETEPIGLQVIAEESSSSSSGEAGSDSYHSPSDPHPSPPRKNKGGGEDDE 64
Query: 323 LRLDAGPSDIREQNVDGSDYSEQALRTQPRNVIGARESNDMPPDYGAPPEXQQREVTMEG 502
+ D P + + S QA T+ + A ++ + P + P+ ++ E G
Sbjct: 65 VDSDYIPPEPVKNAPRRSKRKAQAAPTEREPTVEA--ASAVCPTASSKPKKRRGE---RG 119
Query: 503 ENLQDLSVISSTEM 544
+N+ V + T +
Sbjct: 120 KNVLSKEVHALTRI 133
>02_02_0265 -
8405936-8406367,8406488-8406940,8407073-8407335,
8407445-8407751
Length = 484
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +2
Query: 470 EXQQREVTMEGENLQDLSVISSTEMTFSREQILDGADTTLTEAALDRNTDASDSINHPTT 649
E +Q+E + G N + + + S + I G +T + AL NT+AS +
Sbjct: 186 EPRQKEFLLAGNNQRGQQIFEHSIFQHSGQNIFSGFNTEVLSEALGINTEASKRL-QSQN 244
Query: 650 SSRGQSLTRVTSG 688
RG + RV G
Sbjct: 245 DQRG-DIIRVKHG 256
>06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866
Length = 785
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 129 SKLLIITHSLLLAEQTKEDQLAWIEWFQASQATTSIKLAIILNI 260
++L+ I H L L E ++ WI W QAS + +L I N+
Sbjct: 474 TELIPIDHGLCLPECLEDPYFEWIHWPQASIPFSDDELDYIANL 517
>04_04_1523 - 34148407-34150224
Length = 605
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 129 SKLLIITHSLLLAEQTKEDQLAWIEWFQASQATTSIKLAIILNI 260
++L I H L L E ++ WI W Q+S + +L I N+
Sbjct: 326 TELFPIDHGLCLPENLEDPYFEWIHWAQSSIPFSEEELEYIKNL 369
>02_05_1326 -
35712102-35712473,35712608-35712720,35712944-35714857,
35714942-35715135,35715237-35716786,35716946-35717049,
35717258-35717399,35717692-35717910
Length = 1535
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 500 GENLQDLSVISSTEMTFSREQILDGADTTLTEA 598
GE L D +S E+++ R + +G +TT+TEA
Sbjct: 657 GELLTDSDEVSKEELSYIRFFLCNGVETTITEA 689
>04_03_0448 -
16020773-16021066,16023040-16023291,16023470-16023605,
16023713-16023937,16024467-16024851,16025142-16025421
Length = 523
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 302 GFDHDFQLRLDAGPSDIREQNVDGSDYSEQALR 400
G DH FQ +D+ DI E ++ S E ALR
Sbjct: 48 GIDHLFQEEIDSALKDIHENDLASSKLHEVALR 80
>01_06_1259 - 35810926-35811777
Length = 283
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 110 YRQADGQQTPDNYTQPPTSRANERRPIGLDRMVPGEPSNDQY-QAGNYPQYQG 265
Y DG Q T ANE + L +VP SND Y A + P+ +G
Sbjct: 146 YAITDGNTNNAMEDQMMTGAANEHQSNNLLALVPASTSNDAYVNASSQPRKRG 198
>12_02_0781 +
23105554-23106855,23107191-23107511,23107581-23107667,
23107907-23108302,23108327-23108500,23108600-23108764,
23108857-23109151,23109319-23109446,23109681-23109986,
23110531-23110591,23110676-23110915,23111251-23111372
Length = 1198
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 66 IVTAMASRL-TIAVALTDRQTVSKLLIITHSLLLAEQTKEDQLAWIEWFQASQATTSI 236
++ A RL T++ +LT+ + + H + EQ +E +L W+ FQ +A TS+
Sbjct: 231 LMEAQDMRLKTMSESLTNMKVLKLYAWENHFKGVIEQLRELELKWLSAFQLGKAYTSV 288
>05_06_0005 +
24802843-24803101,24804086-24804333,24804417-24804572,
24804956-24805114,24805862-24805929,24806044-24806433,
24806515-24806563,24806636-24806788,24807416-24807589,
24808207-24808362,24808705-24808756,24808830-24808988,
24809058-24809094,24809218-24809252,24809349-24809400,
24809614-24809663,24810590-24811924,24812688-24812825,
24812907-24812957,24813081-24814237
Length = 1625
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 83 QPTDNSSRPYRQADGQQTPDNYTQPPTSRANERRPIG 193
QP +++ P + ADG+ D + + +S AN+ P G
Sbjct: 720 QPFSSAALPVQNADGESEVDPWCKKTSSSANDSDPWG 756
>04_04_1410 +
33363784-33364086,33364221-33364280,33364388-33364464,
33365032-33365089,33365179-33365262,33365358-33365394,
33365855-33365924,33366655-33366849,33366947-33367039,
33367187-33367418,33367515-33367598,33368205-33368301,
33368510-33368577,33368662-33368739,33368823-33368945,
33369059-33369172,33369288-33369368
Length = 617
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 59 YMDRHGDGQPTDNSSRPYR 115
++ +GDG+PTDN++R Y+
Sbjct: 144 FLATYGDGEPTDNAARFYK 162
>02_05_0167 -
26415319-26415494,26415591-26415840,26415909-26415974,
26416457-26416600,26416813-26416868,26416966-26417101,
26417190-26417277,26417379-26417482,26418515-26419180,
26419337-26419432,26419974-26420242,26420334-26420489,
26421153-26421192
Length = 748
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/52 (23%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 116 QADGQQTPDNYTQPPTSRAN-----ERRPIGLDRMVPGEPSNDQYQAGNYPQ 256
++ G+Q P N++ PP +++N +++ + P PS Q +G + +
Sbjct: 404 KSQGKQGPPNFSTPPAAKSNKKTAGQKKSLETSGSTPPPPSKKQKTSGTFQE 455
>11_06_0325 +
22376195-22377001,22377136-22377525,22377638-22377778,
22377888-22378067,22378268-22378447,22378536-22378637,
22378768-22378896,22379318-22379422,22379528-22379623
Length = 709
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 156 LLLAEQTKEDQLAWIEWFQASQATTSIKLAIILNIREQTTQLANK 290
LLL E T L IEW ++ T + + II + R QL K
Sbjct: 290 LLLDEPTNHVDLDTIEWLESYLKTQEVPMVIISHDRAFLDQLCTK 334
>11_04_0444 + 17816207-17817436
Length = 409
Score = 27.9 bits (59), Expect = 8.5
Identities = 27/79 (34%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +2
Query: 98 SSRPYRQADGQQTPDNYTQPPTSRANERRPIGLDRMVP-GEPSNDQYQAGNYPQ-YQGTN 271
SS +D Q +P TQ PTS RP L P G PSN YQ +P +QG
Sbjct: 16 SSSQATNSDAQNSPS--TQFPTSYPQNFRPSFLQNFHPFGPPSN--YQPYRHPPIFQGAQ 71
Query: 272 YAVSEQRIVTGFDHDFQLR 328
+ G FQL+
Sbjct: 72 QQDYYGQPTPGSLEGFQLQ 90
>09_06_0260 -
21911358-21911438,21911715-21911828,21911911-21912033,
21912342-21912419,21912498-21912647,21913505-21913601,
21913679-21913860,21913899-21913982,21914243-21914303,
21914414-21914506,21914588-21914782,21914937-21915006,
21915536-21915572,21915654-21915737,21915828-21915885,
21916008-21916084,21916185-21916244,21916325-21916687
Length = 668
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 59 YMDRHGDGQPTDNSSRPYR 115
++ +GDG+PTDN++R Y+
Sbjct: 164 FVATYGDGEPTDNAARFYK 182
>08_01_0889 +
8753877-8754236,8754995-8755054,8755174-8755250,
8755481-8755622,8755736-8755772,8755852-8755921,
8756021-8756212,8756321-8756413,8756545-8756773,
8756861-8756944,8757041-8757192,8757279-8757375,
8757576-8757725,8757813-8757890,8757982-8758104,
8758169-8758315,8758418-8758472,8758807-8758874
Length = 737
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 59 YMDRHGDGQPTDNSSRPYR 115
++ +GDG+PTDN++R Y+
Sbjct: 163 FVATYGDGEPTDNAARFYK 181
>04_03_0103 +
11288977-11290353,11291962-11292075,11294987-11295436,
11295813-11295910,11296023-11296206,11296979-11297068,
11301608-11301727,11301812-11302054,11302715-11302988,
11303237-11303357,11303591-11303849
Length = 1109
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 491 TMEGENLQDLSVISSTEMTFSREQILDGADTTLTEAALDR-NTDASDS 631
T+ EN+ + VI +TF + +DGAD + + A+ R NT A +S
Sbjct: 526 TLLSENV--IGVIHDHFVTFRLDMDIDGADNSFVKVAMARQNTGAGES 571
>03_06_0424 + 33837032-33837634
Length = 200
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -3
Query: 187 WSSFVCSASRRLCVIIRSLLTVCLSVRATA-IVSRLAIAVTIHVI 56
W V S R L + + SLL + VRA + + RLA+ + +HV+
Sbjct: 2 WQQLVASIDRGLVLSVSSLLIISRGVRAVSRALVRLAL-LLVHVV 45
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 27.9 bits (59), Expect = 8.5
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +2
Query: 221 SNDQ-YQAGNYPQYQGTN----YAVSEQRIVTGFDHDFQLRLDAGPSDIREQNVDGSDYS 385
SN+Q Y +Y+G++ YA R G D D +A S R+ N DG
Sbjct: 227 SNEQRYSRDREDEYKGSHSNHEYAEGSGRRSYGRDRDSYGDDEAYSSRGRQSNADGPTQD 286
Query: 386 EQALRTQPRNVIGARESNDMPPDY 457
E+ + +P N ++ PP+Y
Sbjct: 287 ERPMERKPSN----QQIASPPPNY 306
>02_02_0271 +
8445823-8445994,8446206-8446468,8446583-8447053,
8447145-8447570
Length = 443
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +2
Query: 470 EXQQREVTMEGENLQDLSVISSTEMTFSREQILDGADTTLTEAALDRNTDASDSINHPTT 649
E +Q+E + G N + V S+ S + I +G T L AL NT A+ +
Sbjct: 141 EPRQKEFLLAGNNNRVQQVYGSSIEQHSSQNIFNGFGTELLSEALGINTVAAKRL-QSQN 199
Query: 650 SSRGQSLTRVTSG 688
RG+ + V +G
Sbjct: 200 DQRGE-IVHVKNG 211
>01_01_1174 + 9348256-9349734
Length = 492
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 135 LLIITHSLLLAEQTKEDQLAWIEWFQASQATTSIKLAIILNI 260
L+ I H L L EQ + W+ W Q+S + +L + ++
Sbjct: 268 LVPIDHGLCLPEQLDDPYFEWLHWPQSSLPFSGAELEYVASL 309
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,889,783
Number of Sequences: 37544
Number of extensions: 392305
Number of successful extensions: 1192
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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