BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_G14
(717 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein ... 24 5.4
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 24 5.4
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 7.2
AY994089-1|AAX86002.1| 267|Anopheles gambiae hyp37.7-like precu... 23 9.5
AJ697719-1|CAG26912.1| 174|Anopheles gambiae putative odorant-b... 23 9.5
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 23 9.5
>CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein
protein.
Length = 615
Score = 23.8 bits (49), Expect = 5.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 576 PTLH*PRLRWTETLTLQILSTIRRPVL 656
P + P L +T LQ+L +RRP+L
Sbjct: 14 PQISSPILNPEDTQKLQLLPAVRRPLL 40
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.8 bits (49), Expect = 5.4
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Frame = +2
Query: 275 AVSEQRIVTGFDHDFQLRLDAGPSDIREQNVD------GSDYSEQALRTQPRNVIGARES 436
+V E+R+V F+L +D G D D G+ +++ A +T + IG+R
Sbjct: 269 SVEEERVVI-----FRLPMDGGVPDPSYYTADASLLHHGAKFNKPAHQTPTSSGIGSRTH 323
Query: 437 NDMPPDYGAPP 469
PD+ A P
Sbjct: 324 PLYQPDHRAEP 334
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 23.4 bits (48), Expect = 7.2
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 92 DNSSRPYRQADGQQTPDNYTQPPTSRANERRPIGLDRM 205
+ ++R YRQ + + P PPT R R G R+
Sbjct: 1116 NEANRAYRQRNRRSQPTPPAPPPTPREAARLEDGRRRV 1153
>AY994089-1|AAX86002.1| 267|Anopheles gambiae hyp37.7-like
precursor protein.
Length = 267
Score = 23.0 bits (47), Expect = 9.5
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -3
Query: 73 VTIHVIFSWWIVSVFGFIXVDPGT 2
+TI I+ +W+++ GF+ V T
Sbjct: 2 ITIRSIWMFWLLATSGFVLVFSAT 25
>AJ697719-1|CAG26912.1| 174|Anopheles gambiae putative
odorant-binding protein OBPjj9 protein.
Length = 174
Score = 23.0 bits (47), Expect = 9.5
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -2
Query: 146 NYQEFADRLPVCKGDCYCQSAGHRRDD 66
++ E D++P+C CY ++ G +D
Sbjct: 92 SFPEETDKIPLCFIRCYLKALGILTED 118
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 23.0 bits (47), Expect = 9.5
Identities = 18/71 (25%), Positives = 23/71 (32%)
Frame = +2
Query: 80 GQPTDNSSRPYRQADGQQTPDNYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQY 259
G+P+ +P +Q QQ PP R R P Q Q Q
Sbjct: 241 GRPSQRHRQPQQQQQQQQQQGERYVPPQLRQ--------QRQQQQRPRQQQQQQQQQQQQ 292
Query: 260 QGTNYAVSEQR 292
QG Y + R
Sbjct: 293 QGERYVPPQLR 303
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,295
Number of Sequences: 2352
Number of extensions: 14976
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -