Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_G14
(717 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y07968-1|CAA69264.1| 400|Homo sapiens TFG protein. 37 0.083
CR456781-1|CAG33062.1| 400|Homo sapiens TFG protein. 37 0.083
BT007428-1|AAP36096.1| 400|Homo sapiens TRK-fused gene protein. 37 0.083
BC023599-1|AAH23599.1| 400|Homo sapiens TRK-fused gene protein. 37 0.083
BC009241-1|AAH09241.1| 400|Homo sapiens TRK-fused gene protein. 37 0.083
BC001483-1|AAH01483.1| 400|Homo sapiens TFG protein protein. 37 0.083
AB097041-1|BAC77394.1| 396|Homo sapiens putative MAPK activatin... 37 0.083
AB097040-1|BAC77393.1| 358|Homo sapiens putative MAPK activatin... 37 0.083
M62324-1|AAA36325.1| 614|Homo sapiens modulator recognition fac... 35 0.33
X69490-1|CAA49245.1| 4650|Homo sapiens titin protein. 33 1.0
U53530-1|AAB09727.1| 897|Homo sapiens cytoplasmic dynein heavy ... 33 1.4
Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein. 32 2.4
BC072400-1|AAH72400.1| 414|Homo sapiens THOC2 protein protein. 32 2.4
AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein. 32 2.4
AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein. 32 2.4
AF441770-1|AAM28436.1| 1478|Homo sapiens Tho2 protein. 32 2.4
AF257500-1|AAG31034.1| 492|Homo sapiens SYT/SSX4 fusion protein... 32 2.4
AF230662-1|AAF79937.1| 492|Homo sapiens unknown protein. 32 2.4
AB300357-1|BAF56184.1| 457|Homo sapiens fusion protein SYT-SSX2... 32 2.4
AB300356-1|BAF56183.1| 488|Homo sapiens fusion protein SYT-SSX2... 32 2.4
AB300355-1|BAF56182.1| 457|Homo sapiens fusion protein SYT-SSX1... 32 2.4
AB300354-1|BAF56181.1| 488|Homo sapiens fusion protein SYT-SSX1... 32 2.4
AB012575-1|BAA32799.1| 117|Homo sapiens SSX-HSTT protein. 32 2.4
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 31 4.1
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 31 5.4
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 31 5.4
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 31 5.4
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 31 5.4
AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens ... 31 5.4
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 31 5.4
AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, he... 30 7.2
AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein. 30 7.2
AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domai... 30 9.5
AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domai... 30 9.5
AL353678-2|CAH71515.1| 784|Homo sapiens zinc finger, CCHC domai... 30 9.5
AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domai... 30 9.5
AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domai... 30 9.5
AL137849-2|CAI14919.1| 784|Homo sapiens zinc finger, CCHC domai... 30 9.5
AK055948-1|BAB71052.1| 671|Homo sapiens protein ( Homo sapiens ... 30 9.5
AB051498-1|BAB21802.1| 1090|Homo sapiens KIAA1711 protein protein. 30 9.5
>Y07968-1|CAA69264.1| 400|Homo sapiens TFG protein.
Length = 400
Score = 36.7 bits (81), Expect = 0.083
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Frame = +2
Query: 101 SRPYRQADGQQTPDN---YTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQY---- 259
S Y Q G Q P Y Q PTS+A G + +P +P QYQA NYP
Sbjct: 273 SASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQ-QYQASNYPAQTYTA 331
Query: 260 ---QGTNYAVS 283
Q TNY V+
Sbjct: 332 QTSQPTNYTVA 342
>CR456781-1|CAG33062.1| 400|Homo sapiens TFG protein.
Length = 400
Score = 36.7 bits (81), Expect = 0.083
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Frame = +2
Query: 101 SRPYRQADGQQTPDN---YTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQY---- 259
S Y Q G Q P Y Q PTS+A G + +P +P QYQA NYP
Sbjct: 273 SASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQ-QYQASNYPAQTYTA 331
Query: 260 ---QGTNYAVS 283
Q TNY V+
Sbjct: 332 QTSQPTNYTVA 342
>BT007428-1|AAP36096.1| 400|Homo sapiens TRK-fused gene protein.
Length = 400
Score = 36.7 bits (81), Expect = 0.083
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Frame = +2
Query: 101 SRPYRQADGQQTPDN---YTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQY---- 259
S Y Q G Q P Y Q PTS+A G + +P +P QYQA NYP
Sbjct: 273 SASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQ-QYQASNYPAQTYTA 331
Query: 260 ---QGTNYAVS 283
Q TNY V+
Sbjct: 332 QTSQPTNYTVA 342
>BC023599-1|AAH23599.1| 400|Homo sapiens TRK-fused gene protein.
Length = 400
Score = 36.7 bits (81), Expect = 0.083
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Frame = +2
Query: 101 SRPYRQADGQQTPDN---YTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQY---- 259
S Y Q G Q P Y Q PTS+A G + +P +P QYQA NYP
Sbjct: 273 SASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQ-QYQASNYPAQTYTA 331
Query: 260 ---QGTNYAVS 283
Q TNY V+
Sbjct: 332 QTSQPTNYTVA 342
>BC009241-1|AAH09241.1| 400|Homo sapiens TRK-fused gene protein.
Length = 400
Score = 36.7 bits (81), Expect = 0.083
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Frame = +2
Query: 101 SRPYRQADGQQTPDN---YTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQY---- 259
S Y Q G Q P Y Q PTS+A G + +P +P QYQA NYP
Sbjct: 273 SASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQ-QYQASNYPAQTYTA 331
Query: 260 ---QGTNYAVS 283
Q TNY V+
Sbjct: 332 QTSQPTNYTVA 342
>BC001483-1|AAH01483.1| 400|Homo sapiens TFG protein protein.
Length = 400
Score = 36.7 bits (81), Expect = 0.083
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Frame = +2
Query: 101 SRPYRQADGQQTPDN---YTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQY---- 259
S Y Q G Q P Y Q PTS+A G + +P +P QYQA NYP
Sbjct: 273 SASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQ-QYQASNYPAQTYTA 331
Query: 260 ---QGTNYAVS 283
Q TNY V+
Sbjct: 332 QTSQPTNYTVA 342
>AB097041-1|BAC77394.1| 396|Homo sapiens putative MAPK activating
protein protein.
Length = 396
Score = 36.7 bits (81), Expect = 0.083
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Frame = +2
Query: 101 SRPYRQADGQQTPDN---YTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQY---- 259
S Y Q G Q P Y Q PTS+A G + +P +P QYQA NYP
Sbjct: 269 SASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQ-QYQASNYPAQTYTA 327
Query: 260 ---QGTNYAVS 283
Q TNY V+
Sbjct: 328 QTSQPTNYTVA 338
>AB097040-1|BAC77393.1| 358|Homo sapiens putative MAPK activating
protein protein.
Length = 358
Score = 36.7 bits (81), Expect = 0.083
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Frame = +2
Query: 101 SRPYRQADGQQTPDN---YTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQY---- 259
S Y Q G Q P Y Q PTS+A G + +P +P QYQA NYP
Sbjct: 231 SASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQ-QYQASNYPAQTYTA 289
Query: 260 ---QGTNYAVS 283
Q TNY V+
Sbjct: 290 QTSQPTNYTVA 300
>M62324-1|AAA36325.1| 614|Homo sapiens modulator recognition factor
I protein.
Length = 614
Score = 34.7 bits (76), Expect = 0.33
Identities = 19/78 (24%), Positives = 32/78 (41%)
Frame = +2
Query: 86 PTDNSSRPYRQADGQQTPDNYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQYQG 265
PT + Y+ A + D T+ P ERR +D+M+PG+ D P +
Sbjct: 175 PTSKPRKQYKMAKENRGDDGATERPKKAKEERR---MDQMMPGKTKADAADPAPLPSQEP 231
Query: 266 TNYAVSEQRIVTGFDHDF 319
+ +Q + +G F
Sbjct: 232 PRNSTEQQGLASGSSVSF 249
>X69490-1|CAA49245.1| 4650|Homo sapiens titin protein.
Length = 4650
Score = 33.1 bits (72), Expect = 1.0
Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 6/143 (4%)
Frame = +2
Query: 137 PDNYTQPPTSRANERRPIGLDRMVPGEPSND-QYQAGNYPQYQGTNYAVSEQRIVTGFDH 313
P +QP + NE + + R + GEPS + ++ N P +N ++S R V +
Sbjct: 4361 PAFISQPRSQNINEGQNVLFTREISGEPSPEIEWFKNNLPISISSNVSISRSRNVYSLEI 4420
Query: 314 DFQLRLDAGPSDIREQNVDGSDYSEQALRT-----QPRNVIGARESNDMPPDYGAPPEXQ 478
D+G I+ +N G + +L +P + R S D +
Sbjct: 4421 RNASVSDSGKYTIKAKNFRGQCSATASLMVLPLVEEPSREVVLRTSGDTSLQGSFSSQSV 4480
Query: 479 QREVTMEGENLQDLSVISSTEMT 547
Q + + + S S++ MT
Sbjct: 4481 QMSASKQEASFSSFSSSSASSMT 4503
>U53530-1|AAB09727.1| 897|Homo sapiens cytoplasmic dynein heavy
chain 1 (DHC1) protein.
Length = 897
Score = 32.7 bits (71), Expect = 1.4
Identities = 26/127 (20%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = +3
Query: 27 PKTLTIHQEKITWIVTAMASRLTIAVALTDRQTVSKLLIITHSLLLAEQTKEDQLAWIEW 206
P ++T H + W+ T + + + +A ++V+++ I + + T + WI+
Sbjct: 560 PVSITEHPKINEWL-TLVEKEMRVTLAKLLAESVTEVEIFGKATSIDPNT---YITWIDK 615
Query: 207 FQASQATTSIKLAIILNIREQTTQLANKGSSLASITIFSYG*TLGLQILENKMLTD-PII 383
+QA S ++A N+ + + G + S ++ S + L +L + +L + P +
Sbjct: 616 YQAQLVVLSAQIAWSENVETALSSMGGGGDAAPSDSVLS-NVEVTLNVLADSVLMEQPPL 674
Query: 384 LNRRSEH 404
R+ EH
Sbjct: 675 RRRKLEH 681
>Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 31.9 bits (69), Expect = 2.4
Identities = 28/141 (19%), Positives = 55/141 (39%)
Frame = +2
Query: 140 DNYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQYQGTNYAVSEQRIVTGFDHDF 319
D + T ++ ER G+ + + + + N +N AV E G + +
Sbjct: 1220 DESSTEETDKSRERSQCGVKAVNKASSTTPKGNSSNGNSGSNSNKAVKENDKEKGKEKEK 1279
Query: 320 QLRLDAGPSDIREQNVDGSDYSEQALRTQPRNVIGARESNDMPPDYGAPPEXQQREVTME 499
+ + + P+ E V G D E+ +P ARE+ + P E ++E +
Sbjct: 1280 EKK-EKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKERTPKSDKEKEKFKKEEKAK 1338
Query: 500 GENLQDLSVISSTEMTFSREQ 562
E + + ++ T RE+
Sbjct: 1339 DEKFKTTVPNAESKSTQERER 1359
>BC072400-1|AAH72400.1| 414|Homo sapiens THOC2 protein protein.
Length = 414
Score = 31.9 bits (69), Expect = 2.4
Identities = 28/141 (19%), Positives = 55/141 (39%)
Frame = +2
Query: 140 DNYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQYQGTNYAVSEQRIVTGFDHDF 319
D + T ++ ER G+ + + + + N +N AV E G + +
Sbjct: 41 DESSTEETDKSRERSQCGVKAVNKASSTTPKGNSSNGNSGSNSNKAVKENDKEKGKEKEK 100
Query: 320 QLRLDAGPSDIREQNVDGSDYSEQALRTQPRNVIGARESNDMPPDYGAPPEXQQREVTME 499
+ + + P+ E V G D E+ +P ARE+ + P E ++E +
Sbjct: 101 EKK-EKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKERTPKSDKEKEKFKKEEKAK 159
Query: 500 GENLQDLSVISSTEMTFSREQ 562
E + + ++ T RE+
Sbjct: 160 DEKFKTTVPNAESKSTQERER 180
>AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 31.9 bits (69), Expect = 2.4
Identities = 28/141 (19%), Positives = 55/141 (39%)
Frame = +2
Query: 140 DNYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQYQGTNYAVSEQRIVTGFDHDF 319
D + T ++ ER G+ + + + + N +N AV E G + +
Sbjct: 1220 DESSTEETDKSRERSQCGVKAVNKASSTTPKGNSSNGNSGSNSNKAVKENDKEKGKEKEK 1279
Query: 320 QLRLDAGPSDIREQNVDGSDYSEQALRTQPRNVIGARESNDMPPDYGAPPEXQQREVTME 499
+ + + P+ E V G D E+ +P ARE+ + P E ++E +
Sbjct: 1280 EKK-EKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKERTPKSDKEKEKFKKEEKAK 1338
Query: 500 GENLQDLSVISSTEMTFSREQ 562
E + + ++ T RE+
Sbjct: 1339 DEKFKTTVPNAESKSTQERER 1359
>AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 31.9 bits (69), Expect = 2.4
Identities = 28/141 (19%), Positives = 55/141 (39%)
Frame = +2
Query: 140 DNYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQYQGTNYAVSEQRIVTGFDHDF 319
D + T ++ ER G+ + + + + N +N AV E G + +
Sbjct: 1220 DESSTEETDKSRERSQCGVKAVNKASSTTPKGNSSNGNSGSNSNKAVKENDKEKGKEKEK 1279
Query: 320 QLRLDAGPSDIREQNVDGSDYSEQALRTQPRNVIGARESNDMPPDYGAPPEXQQREVTME 499
+ + + P+ E V G D E+ +P ARE+ + P E ++E +
Sbjct: 1280 EKK-EKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKERTPKSDKEKEKFKKEEKAK 1338
Query: 500 GENLQDLSVISSTEMTFSREQ 562
E + + ++ T RE+
Sbjct: 1339 DEKFKTTVPNAESKSTQERER 1359
>AF441770-1|AAM28436.1| 1478|Homo sapiens Tho2 protein.
Length = 1478
Score = 31.9 bits (69), Expect = 2.4
Identities = 28/141 (19%), Positives = 55/141 (39%)
Frame = +2
Query: 140 DNYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQYQGTNYAVSEQRIVTGFDHDF 319
D + T ++ ER G+ + + + + N +N AV E G + +
Sbjct: 1105 DESSTEETDKSRERSQCGVKAVNKASSTTPKGNSSNGNSGSNSNKAVKENDKEKGKEKEK 1164
Query: 320 QLRLDAGPSDIREQNVDGSDYSEQALRTQPRNVIGARESNDMPPDYGAPPEXQQREVTME 499
+ + + P+ E V G D E+ +P ARE+ + P E ++E +
Sbjct: 1165 EKK-EKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKERTPKSDKEKEKFKKEEKAK 1223
Query: 500 GENLQDLSVISSTEMTFSREQ 562
E + + ++ T RE+
Sbjct: 1224 DEKFKTTVPNAESKSTQERER 1244
>AF257500-1|AAG31034.1| 492|Homo sapiens SYT/SSX4 fusion protein
protein.
Length = 492
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 110 YRQADGQQTPD-NYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQYQG 265
Y Q GQQ TQP + ++RP G D+++P +P+ ++ P+ G
Sbjct: 383 YPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQIMPKKPAEEENGLKEVPEASG 435
>AF230662-1|AAF79937.1| 492|Homo sapiens unknown protein.
Length = 492
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 110 YRQADGQQTPD-NYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQYQG 265
Y Q GQQ TQP + ++RP G D+++P +P+ + + P+ G
Sbjct: 383 YPQGQGQQFGGYRPTQPGPPQPPQQRPYGYDQIMPKKPAEEGNDSEEVPEASG 435
>AB300357-1|BAF56184.1| 457|Homo sapiens fusion protein SYT-SSX2
protein.
Length = 457
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 110 YRQADGQQTPD-NYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQYQG 265
Y Q GQQ TQP + ++RP G D+++P +P+ + + P+ G
Sbjct: 348 YPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQIMPKKPAEEGNDSEEVPEASG 400
>AB300356-1|BAF56183.1| 488|Homo sapiens fusion protein SYT-SSX2
protein.
Length = 488
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 110 YRQADGQQTPD-NYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQYQG 265
Y Q GQQ TQP + ++RP G D+++P +P+ + + P+ G
Sbjct: 379 YPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQIMPKKPAEEGNDSEEVPEASG 431
>AB300355-1|BAF56182.1| 457|Homo sapiens fusion protein SYT-SSX1
protein.
Length = 457
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 110 YRQADGQQTPD-NYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQYQG 265
Y Q GQQ TQP + ++RP G D+++P +P+ D+ + + G
Sbjct: 348 YPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQIMPKKPAEDENDSKGVSEASG 400
>AB300354-1|BAF56181.1| 488|Homo sapiens fusion protein SYT-SSX1
protein.
Length = 488
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 110 YRQADGQQTPD-NYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQYQG 265
Y Q GQQ TQP + ++RP G D+++P +P+ D+ + + G
Sbjct: 379 YPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQIMPKKPAEDENDSKGVSEASG 431
>AB012575-1|BAA32799.1| 117|Homo sapiens SSX-HSTT protein.
Length = 117
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 110 YRQADGQQTPD-NYTQPPTSRANERRPIGLDRMVPGEPSNDQYQAGNYPQYQG 265
Y Q GQQ TQP + ++RP G D+++P +P+ + + P+ G
Sbjct: 48 YPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQIMPKKPAEEGNDSEEVPEASG 100
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 31.1 bits (67), Expect = 4.1
Identities = 35/139 (25%), Positives = 52/139 (37%), Gaps = 5/139 (3%)
Frame = +2
Query: 68 RHGDGQPTDNSSRPYRQADGQQTPDNYTQPPTSRA-NERRPIGLDRMVPGEPSNDQYQAG 244
R P +SS +A + D+Y PP RR + L G + D Y +
Sbjct: 164 RSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSR 223
Query: 245 NYPQYQGTNYAVSEQRIVTGFDHDFQLRLDAGPS-DIREQNVDG--SDYSEQALRTQPRN 415
+YP + T R T D+ D PS + +++ G DYS+ R+
Sbjct: 224 DYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSREYSDRDGYGRDRDYSDHPSGGSYRD 283
Query: 416 VIGA-RESNDMPPDYGAPP 469
+ S PP G PP
Sbjct: 284 SYESYGNSRSAPPTRGPPP 302
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 30.7 bits (66), Expect = 5.4
Identities = 35/139 (25%), Positives = 49/139 (35%), Gaps = 5/139 (3%)
Frame = +2
Query: 68 RHGDGQPTDNSSRPYRQADGQQTPDNYTQPPTSRA-NERRPIGLDRMVPGEPSNDQYQAG 244
R P +SS +A + D+Y PP RR + L G + D Y +
Sbjct: 164 RSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSR 223
Query: 245 NYPQYQGTNYAVSEQRIVTGFDHDFQLRLDAGPS---DIREQNVDGSDYSEQALRTQPRN 415
+YP + T R T D+ D PS R+ DYS+ R+
Sbjct: 224 DYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYSDRDGYGRDRDYSDHPSGGSYRD 283
Query: 416 VIGA-RESNDMPPDYGAPP 469
+ S PP G PP
Sbjct: 284 SYESYGNSRSAPPTRGPPP 302
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 30.7 bits (66), Expect = 5.4
Identities = 35/139 (25%), Positives = 49/139 (35%), Gaps = 5/139 (3%)
Frame = +2
Query: 68 RHGDGQPTDNSSRPYRQADGQQTPDNYTQPPTSRA-NERRPIGLDRMVPGEPSNDQYQAG 244
R P +SS +A + D+Y PP RR + L G + D Y +
Sbjct: 164 RSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSR 223
Query: 245 NYPQYQGTNYAVSEQRIVTGFDHDFQLRLDAGPS---DIREQNVDGSDYSEQALRTQPRN 415
+YP + T R T D+ D PS R+ DYS+ R+
Sbjct: 224 DYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYSDRDGYGRDRDYSDHPSGGSYRD 283
Query: 416 VIGA-RESNDMPPDYGAPP 469
+ S PP G PP
Sbjct: 284 SYESYGNSRSAPPTRGPPP 302
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 30.7 bits (66), Expect = 5.4
Identities = 35/139 (25%), Positives = 49/139 (35%), Gaps = 5/139 (3%)
Frame = +2
Query: 68 RHGDGQPTDNSSRPYRQADGQQTPDNYTQPPTSRA-NERRPIGLDRMVPGEPSNDQYQAG 244
R P +SS +A + D+Y PP RR + L G + D Y +
Sbjct: 164 RSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSR 223
Query: 245 NYPQYQGTNYAVSEQRIVTGFDHDFQLRLDAGPS---DIREQNVDGSDYSEQALRTQPRN 415
+YP + T R T D+ D PS R+ DYS+ R+
Sbjct: 224 DYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYSDRDGYGRDRDYSDHPSGGSYRD 283
Query: 416 VIGA-RESNDMPPDYGAPP 469
+ S PP G PP
Sbjct: 284 SYESYGNSRSAPPTRGPPP 302
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 30.7 bits (66), Expect = 5.4
Identities = 35/139 (25%), Positives = 49/139 (35%), Gaps = 5/139 (3%)
Frame = +2
Query: 68 RHGDGQPTDNSSRPYRQADGQQTPDNYTQPPTSRA-NERRPIGLDRMVPGEPSNDQYQAG 244
R P +SS +A + D+Y PP RR + L G + D Y +
Sbjct: 164 RSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSR 223
Query: 245 NYPQYQGTNYAVSEQRIVTGFDHDFQLRLDAGPS---DIREQNVDGSDYSEQALRTQPRN 415
+YP + T R T D+ D PS R+ DYS+ R+
Sbjct: 224 DYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYSDRDGYGRDRDYSDHPSGGSYRD 283
Query: 416 VIGA-RESNDMPPDYGAPP 469
+ S PP G PP
Sbjct: 284 SYESYGNSRSAPPTRGPPP 302
>AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens
cDNA FLJ38696 fis, clone KIDNE2001931, highly similar to
HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN G. ).
Length = 378
Score = 30.7 bits (66), Expect = 5.4
Identities = 35/139 (25%), Positives = 49/139 (35%), Gaps = 5/139 (3%)
Frame = +2
Query: 68 RHGDGQPTDNSSRPYRQADGQQTPDNYTQPPTSRA-NERRPIGLDRMVPGEPSNDQYQAG 244
R P +SS +A + D+Y PP RR + L G + D Y +
Sbjct: 151 RSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSR 210
Query: 245 NYPQYQGTNYAVSEQRIVTGFDHDFQLRLDAGPS---DIREQNVDGSDYSEQALRTQPRN 415
+YP + T R T D+ D PS R+ DYS+ R+
Sbjct: 211 DYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYSDRDGYGRDRDYSDHPSGGSYRD 270
Query: 416 VIGA-RESNDMPPDYGAPP 469
+ S PP G PP
Sbjct: 271 SYESYGNSRSAPPTRGPPP 289
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 30.7 bits (66), Expect = 5.4
Identities = 35/139 (25%), Positives = 49/139 (35%), Gaps = 5/139 (3%)
Frame = +2
Query: 68 RHGDGQPTDNSSRPYRQADGQQTPDNYTQPPTSRA-NERRPIGLDRMVPGEPSNDQYQAG 244
R P +SS +A + D+Y PP RR + L G + D Y +
Sbjct: 164 RSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSR 223
Query: 245 NYPQYQGTNYAVSEQRIVTGFDHDFQLRLDAGPS---DIREQNVDGSDYSEQALRTQPRN 415
+YP + T R T D+ D PS R+ DYS+ R+
Sbjct: 224 DYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYSDRDGYGRDRDYSDHPSGGSYRD 283
Query: 416 VIGA-RESNDMPPDYGAPP 469
+ S PP G PP
Sbjct: 284 SYESYGNSRSAPPTRGPPP 302
>AY682080-1|AAT74625.1| 4646|Homo sapiens dynein, cytoplasmic, heavy
polypeptide 1 protein.
Length = 4646
Score = 30.3 bits (65), Expect = 7.2
Identities = 25/127 (19%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Frame = +3
Query: 27 PKTLTIHQEKITWIVTAMASRLTIAVALTDRQTVSKLLIITHSLLLAEQTKEDQLAWIEW 206
P ++T H + W+ T + + + +A ++V+++ I + + T + WI+
Sbjct: 1689 PVSITEHPKINEWL-TLVEKEMRVTLAKLLAESVTEVEIFGKATSIDPNT---YITWIDK 1744
Query: 207 FQASQATTSIKLAIILNIREQTTQLANKGSSLASITIFSYG*TLGLQILENKMLTD-PII 383
+QA S ++A N+ + + G + ++ S + L +L + +L + P +
Sbjct: 1745 YQAQLVVLSAQIAWSENVETALSSMGGGGDAAPLHSVLS-NVEVTLNVLADSVLMEQPPL 1803
Query: 384 LNRRSEH 404
R+ EH
Sbjct: 1804 RRRKLEH 1810
>AB002323-1|BAA20783.3| 4658|Homo sapiens KIAA0325 protein protein.
Length = 4658
Score = 30.3 bits (65), Expect = 7.2
Identities = 25/127 (19%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Frame = +3
Query: 27 PKTLTIHQEKITWIVTAMASRLTIAVALTDRQTVSKLLIITHSLLLAEQTKEDQLAWIEW 206
P ++T H + W+ T + + + +A ++V+++ I + + T + WI+
Sbjct: 1701 PVSITEHPKINEWL-TLVEKEMRVTLAKLLAESVTEVEIFGKATSIDPNT---YITWIDK 1756
Query: 207 FQASQATTSIKLAIILNIREQTTQLANKGSSLASITIFSYG*TLGLQILENKMLTD-PII 383
+QA S ++A N+ + + G + ++ S + L +L + +L + P +
Sbjct: 1757 YQAQLVVLSAQIAWSENVETALSSMGGGGDAAPLHSVLS-NVEVTLNVLADSVLMEQPPL 1815
Query: 384 LNRRSEH 404
R+ EH
Sbjct: 1816 RRRKLEH 1822
>AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1495
Score = 29.9 bits (64), Expect = 9.5
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 479 QREVTMEGENLQDLSVISSTEM-TFSREQILDGADTTLTEAALDRNTDASDSINHPTTSS 655
+ E T++ E Q+ + + T + LDG T TE + DS+NH T S
Sbjct: 782 ESESTLDLEGFQNPTAKECEGLATLDNKADLDGESTEGTE-------ELEDSLNHFTHSV 834
Query: 656 RGQSLTRVTSGEDSERD 706
+GQ+ + S E+ E D
Sbjct: 835 QGQTSEMIPSDEEEEDD 851
>AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1259
Score = 29.9 bits (64), Expect = 9.5
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 479 QREVTMEGENLQDLSVISSTEM-TFSREQILDGADTTLTEAALDRNTDASDSINHPTTSS 655
+ E T++ E Q+ + + T + LDG T TE + DS+NH T S
Sbjct: 659 ESESTLDLEGFQNPTAKECEGLATLDNKADLDGESTEGTE-------ELEDSLNHFTHSV 711
Query: 656 RGQSLTRVTSGEDSERD 706
+GQ+ + S E+ E D
Sbjct: 712 QGQTSEMIPSDEEEEDD 728
>AL353678-2|CAH71515.1| 784|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 784
Score = 29.9 bits (64), Expect = 9.5
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 479 QREVTMEGENLQDLSVISSTEM-TFSREQILDGADTTLTEAALDRNTDASDSINHPTTSS 655
+ E T++ E Q+ + + T + LDG T TE + DS+NH T S
Sbjct: 71 ESESTLDLEGFQNPTAKECEGLATLDNKADLDGESTEGTE-------ELEDSLNHFTHSV 123
Query: 656 RGQSLTRVTSGEDSERD 706
+GQ+ + S E+ E D
Sbjct: 124 QGQTSEMIPSDEEEEDD 140
>AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1495
Score = 29.9 bits (64), Expect = 9.5
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 479 QREVTMEGENLQDLSVISSTEM-TFSREQILDGADTTLTEAALDRNTDASDSINHPTTSS 655
+ E T++ E Q+ + + T + LDG T TE + DS+NH T S
Sbjct: 782 ESESTLDLEGFQNPTAKECEGLATLDNKADLDGESTEGTE-------ELEDSLNHFTHSV 834
Query: 656 RGQSLTRVTSGEDSERD 706
+GQ+ + S E+ E D
Sbjct: 835 QGQTSEMIPSDEEEEDD 851
>AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 1259
Score = 29.9 bits (64), Expect = 9.5
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 479 QREVTMEGENLQDLSVISSTEM-TFSREQILDGADTTLTEAALDRNTDASDSINHPTTSS 655
+ E T++ E Q+ + + T + LDG T TE + DS+NH T S
Sbjct: 659 ESESTLDLEGFQNPTAKECEGLATLDNKADLDGESTEGTE-------ELEDSLNHFTHSV 711
Query: 656 RGQSLTRVTSGEDSERD 706
+GQ+ + S E+ E D
Sbjct: 712 QGQTSEMIPSDEEEEDD 728
>AL137849-2|CAI14919.1| 784|Homo sapiens zinc finger, CCHC domain
containing 6 protein.
Length = 784
Score = 29.9 bits (64), Expect = 9.5
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 479 QREVTMEGENLQDLSVISSTEM-TFSREQILDGADTTLTEAALDRNTDASDSINHPTTSS 655
+ E T++ E Q+ + + T + LDG T TE + DS+NH T S
Sbjct: 71 ESESTLDLEGFQNPTAKECEGLATLDNKADLDGESTEGTE-------ELEDSLNHFTHSV 123
Query: 656 RGQSLTRVTSGEDSERD 706
+GQ+ + S E+ E D
Sbjct: 124 QGQTSEMIPSDEEEEDD 140
>AK055948-1|BAB71052.1| 671|Homo sapiens protein ( Homo sapiens
cDNA FLJ31386 fis, clone NT2NE1000014, weakly similar to
Schizosaccharomyces pombe caffeine-induced death protein
1 ).
Length = 671
Score = 29.9 bits (64), Expect = 9.5
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 479 QREVTMEGENLQDLSVISSTEM-TFSREQILDGADTTLTEAALDRNTDASDSINHPTTSS 655
+ E T++ E Q+ + + T + LDG T TE + DS+NH T S
Sbjct: 71 ESESTLDLEGFQNPTAKECEGLATLDNKADLDGESTEGTE-------ELEDSLNHFTHSV 123
Query: 656 RGQSLTRVTSGEDSERD 706
+GQ+ + S E+ E D
Sbjct: 124 QGQTSEMIPSDEEEEDD 140
>AB051498-1|BAB21802.1| 1090|Homo sapiens KIAA1711 protein protein.
Length = 1090
Score = 29.9 bits (64), Expect = 9.5
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 479 QREVTMEGENLQDLSVISSTEM-TFSREQILDGADTTLTEAALDRNTDASDSINHPTTSS 655
+ E T++ E Q+ + + T + LDG T TE + DS+NH T S
Sbjct: 377 ESESTLDLEGFQNPTAKECEGLATLDNKADLDGESTEGTE-------ELEDSLNHFTHSV 429
Query: 656 RGQSLTRVTSGEDSERD 706
+GQ+ + S E+ E D
Sbjct: 430 QGQTSEMIPSDEEEEDD 446
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,299,095
Number of Sequences: 237096
Number of extensions: 2119500
Number of successful extensions: 5198
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 4871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5195
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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