Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_G10
(647 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 211 6e-56
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 98 8e-22
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 95 8e-21
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 88 9e-19
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 73 3e-14
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 73 5e-14
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 71 1e-13
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 68 1e-12
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 32 0.082
SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex ... 28 1.0
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 27 1.8
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 27 1.8
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 3.1
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 26 5.4
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 25 7.1
SPCC1672.03c |||guanine deaminase |Schizosaccharomyces pombe|chr... 25 9.4
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 211 bits (516), Expect = 6e-56
Identities = 101/191 (52%), Positives = 139/191 (72%)
Frame = +3
Query: 75 GIQAVMXTXLGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXXX 254
G+Q V+ + LGP GT MLV GAG IKLTKDG VLL +QIQ+PTAS IA+
Sbjct: 27 GLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIAKAATAQDDAT 86
Query: 255 XXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEVARENL 434
LL+GELLKQA+++I EGLHP +I++GF++A+N++L L+S K EV RE L
Sbjct: 87 GDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFKTDFEVDREVL 146
Query: 435 VDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVK 614
++VA+TSL TK+ + + L A VDA+LTIR P +P+DLHMVEIM+M++++A++T L++
Sbjct: 147 LNVAKTSLSTKISSKVVESLAPAVVDAILTIRRPDEPIDLHMVEIMKMQNRSASDTQLIR 206
Query: 615 GLXMDHGARHP 647
GL +DHGARHP
Sbjct: 207 GLLLDHGARHP 217
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 98.3 bits (234), Expect = 8e-22
Identities = 57/196 (29%), Positives = 103/196 (52%), Gaps = 4/196 (2%)
Frame = +3
Query: 72 KGIQAVMXTXLGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXX 251
K + ++ T LGP+G +L+S G I +T DG +L ++++H A L+ +
Sbjct: 44 KTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKLLVQLSKSQDDE 103
Query: 252 XXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEVAREN 431
V+L G LL+QA+ I +G+HP I +G++ A +++ L+++ ++ + EN
Sbjct: 104 IGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAISDVVDFSPEN 163
Query: 432 LVDV---ARTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHMVEIMEMKHKTATE 599
++ A+TSL +KV D + VDAVL++ K VD ++++ + +
Sbjct: 164 TTNLFRSAKTSLGSKVVSKAHDHFANIAVDAVLSVADLQRKDVDFELIKVDGKVGGSVDD 223
Query: 600 TVLVKGLXMDHGARHP 647
T LVKG+ +D HP
Sbjct: 224 TKLVKGVVVDKDMSHP 239
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 95.1 bits (226), Expect = 8e-21
Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 3/192 (1%)
Frame = +3
Query: 72 KGIQAVMXTXLGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXX 251
+ + + T LGPKG M+ +G G + LT DG +L L + HP A ++
Sbjct: 29 RSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLVDLSAAQDVE 88
Query: 252 XXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEVA-RE 428
V+L G +L A+ + +G+HP +I E F A +++ ++ + IE++ RE
Sbjct: 89 AGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKENALAIELSDRE 148
Query: 429 NLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTP--GKPVDLHMVEIMEMKHKTATET 602
+L+ A TSL +K+ +++L VDAVL + P VDL + I++ +T
Sbjct: 149 SLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKVIDPRVATNVDLKDIRIVKKLGGIIDDT 208
Query: 603 VLVKGLXMDHGA 638
L+ GL + A
Sbjct: 209 ELIPGLALTQTA 220
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 88.2 bits (209), Expect = 9e-19
Identities = 49/190 (25%), Positives = 101/190 (53%), Gaps = 6/190 (3%)
Frame = +3
Query: 78 IQAVMXTXLGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXXXX 257
I V+ + LGP G MLV G + +T DG +L L ++HP ++
Sbjct: 33 IANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVG 92
Query: 258 XXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVL-ESMKIPIE-VAREN 431
V++ ELL++A+ + +HP I G+ +A ++++ + + + ++ + +E+
Sbjct: 93 DGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSVDSLGKES 152
Query: 432 LVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVD----LHMVEIMEMKHKTATE 599
L++VA+TS+ +K+ + +D + VDA+L+++T + + V I++ K++ E
Sbjct: 153 LINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRYPVKAVNILKAHGKSSRE 212
Query: 600 TVLVKGLXMD 629
+VLVKG ++
Sbjct: 213 SVLVKGYALN 222
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 73.3 bits (172), Expect = 3e-14
Identities = 46/186 (24%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Frame = +3
Query: 78 IQAVMXTXLGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXXXX 257
+Q + T LGP G ++V G + ++ DG ++ L I HP A +
Sbjct: 36 VQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHPAAKTLVDIARAQDAEVG 95
Query: 258 XXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEVA----- 422
V+ GELL++A F+ +G+ +I G+ A ++ ++ + I ++++
Sbjct: 96 DGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLDLSDEGKL 155
Query: 423 RENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 602
R+ L A T++ +K+ S + T VDAVLT+ + ++ +M+ I ++ ++
Sbjct: 156 RDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTL--DQEDLNENMIGIKKVPGGAMEDS 213
Query: 603 VLVKGL 620
+LVKG+
Sbjct: 214 LLVKGV 219
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 72.5 bits (170), Expect = 5e-14
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Frame = +3
Query: 78 IQAVMXTXLGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXXXX 257
+ + T LGP G ++V+ LT D ++ L++ HP A L+
Sbjct: 38 LSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLVVDATQQQENELG 97
Query: 258 XXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM---KIPIEVARE 428
V+ GELL +A+ I GL P I +G+++A + ++EVLE + KI + +
Sbjct: 98 DAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICADKIETVESEK 157
Query: 429 NLVDVARTSLKTKVHPSLADVLTDACVDAVLTI--RTPGKPVDLHMVEIMEMKHKTATET 602
L+ RT + +K + + D L+D A+LT+ + P K ++ + ++++ + +
Sbjct: 158 ELIKAIRTCISSKQYGN-EDFLSDLVAKAILTVLPKDPSK-FNVDNIRVVKIMGSSLYNS 215
Query: 603 VLVKGL 620
+VKG+
Sbjct: 216 QVVKGM 221
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 71.3 bits (167), Expect = 1e-13
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 1/153 (0%)
Frame = +3
Query: 72 KGIQAVMXTXLGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXX 251
K + V+ T LGP+ ML+ G + LT DG+ +L +++ HP A +
Sbjct: 29 KAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHPAAKSMIELARTQDEE 88
Query: 252 XXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEV-ARE 428
++L GE+L A + +HP ++ F A +L +++ + +P+ V
Sbjct: 89 VGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITLPVNVDDNA 148
Query: 429 NLVDVARTSLKTKVHPSLADVLTDACVDAVLTI 527
+ + RT + TK+ +D++ + AV T+
Sbjct: 149 EMFRLIRTCIGTKLVARWSDLMCHLALRAVRTV 181
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 68.1 bits (159), Expect = 1e-12
Identities = 42/168 (25%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Frame = +3
Query: 87 VMXTXLGPKGTXXMLVSGA-GXIKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXXXXXX 263
++ + LGPKG +L S + G I +T DG +L + + + A ++
Sbjct: 35 LVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIALDNAAAKVLVNISKVQDDEVGDG 94
Query: 264 XXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKI-----PIEVARE 428
+ ELL+QA+I ++ +HP++I +G+ IA +++ L + I P + R
Sbjct: 95 TTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDALRASSIDNSSDPAKF-RS 153
Query: 429 NLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIM 572
+L ++ART+L +K+ + VDAVL ++ ++ +++I+
Sbjct: 154 DLENIARTTLSSKILSQNKNHFAQLAVDAVLRLKGSTNLDNIQIIKIL 201
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 31.9 bits (69), Expect = 0.082
Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Frame = +3
Query: 81 QAVMXTXLGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPTASLIAR----XXXXXXX 248
+AV T LGPKG ++ G K+TKDG + + ++ +L AR
Sbjct: 56 RAVSVT-LGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNE 114
Query: 249 XXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEVARE 428
+L + + ++ G +P + G +A + +E L++ K I + E
Sbjct: 115 VAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFLQANKRDITTS-E 173
Query: 429 NLVDVARTSLK--TKVHPSLADVLTDACVDAVLTIR 530
+ VA S T + LA + + V+T++
Sbjct: 174 EISQVATISANGDTHIGELLAKAMERVGKEGVITVK 209
>SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 312 IFISEGLHPRIITEGFDIARNKSLEVLESMKI 407
+F+ E + I EGF IAR K +E LE +K+
Sbjct: 437 VFLLEEIVELCIAEGFLIARAKRVESLERVKV 468
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 516 PHQRKHQLAHLPSLGGP*F*VKY 448
PHQR H A L GGP F + Y
Sbjct: 63 PHQRAHNAAALARSGGPGFSMNY 85
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 432 LVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHK 587
L D++ T K VHPS++ L A + L +++ G + ++VE +HK
Sbjct: 14 LSDISTTINKPNVHPSMS--LLKALPECRLVVKSKGDKNNANVVEFPLDRHK 63
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = -2
Query: 463 VLSEVRATSTKFSRATSIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPM 284
VLS V+A + + S +F+ + + + + + KPS M +SAC++ + +
Sbjct: 567 VLSAVKACLEE--KKISEALFLSTFGGKECRKCVRDAFYELQEHKPSYMRLSACIADNDL 624
Query: 283 RRTVD 269
+ VD
Sbjct: 625 QNVVD 629
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +3
Query: 372 NKSLEVLESMKIPIEVARENLVDVARTSLKTKVHPSLADVLTD 500
++SL++L+ + V+ ++ VD+ART ++ S ++V+ D
Sbjct: 270 SESLDLLDDFNYQVTVSNKSFVDIARTEYFITIY-SDSNVILD 311
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 25.4 bits (53), Expect = 7.1
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 327 GLHPRIITEGFDIARNKSLE-VLESMKIPIEVARENLVDVARTSLKTKVHPSLADVLTDA 503
G P +I E +A S + ++E + I+ + ++D + S + + ++AD+ D
Sbjct: 461 GRFPDVI-EVAQLALKHSCDFIIEGELVAIDKSNGQILDFQKLSTRERKKVTVADITIDV 519
Query: 504 CV 509
CV
Sbjct: 520 CV 521
>SPCC1672.03c |||guanine deaminase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 527
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 32 SCCTGTCCKSLRS*RHSSCNXNXP 103
SCC G CCK S R +C P
Sbjct: 491 SCCGGHCCKE-ESCRTENCKGAYP 513
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,327,220
Number of Sequences: 5004
Number of extensions: 41848
Number of successful extensions: 105
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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