Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_G10
(647 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 186 1e-47
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 103 2e-22
10_08_0620 - 19321612-19323237 93 2e-19
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 87 9e-18
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 87 1e-17
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 81 6e-16
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 75 4e-14
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 68 7e-12
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 67 1e-11
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 52 5e-07
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 48 5e-06
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 39 0.003
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 38 0.007
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 29 3.2
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 29 3.2
11_06_0713 + 26524984-26525276,26526008-26526434,26526550-265271... 29 4.2
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 28 7.4
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 186 bits (453), Expect = 1e-47
Identities = 105/212 (49%), Positives = 131/212 (61%), Gaps = 20/212 (9%)
Frame = +3
Query: 72 KGIQAVMXTXLGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXX 251
KG+Q V+ T LGPKGT MLV GAG IKLTKDGN LL +QIQ+PTA +IAR
Sbjct: 27 KGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDT 86
Query: 252 XXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPI----EV 419
VL IGEL+KQ++ I EG HPR + +GFD+A+ +LE LE K + E
Sbjct: 87 SGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDGFDVAKRATLEFLEKFKTSVVMGDEP 146
Query: 420 ARENLVDVARTSLKTKV----------------HPSLADVLTDACVDAVLTIRTPGKPVD 551
RE L +ART+L+TKV + LAD LTD V+AVL IR P +P+D
Sbjct: 147 DREILKMIARTTLRTKVGAVCFLAFKLSLLGQLYEGLADQLTDIVVNAVLCIRKPDEPID 206
Query: 552 LHMVEIMEMKHKTATETVLVKGLXMDHGARHP 647
L MVEIM M+HK +T LV+GL +DHG+RHP
Sbjct: 207 LFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHP 238
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 103 bits (246), Expect = 2e-22
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 3/194 (1%)
Frame = +3
Query: 72 KGIQAVMXTXLGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXX 251
+ + + T LGP+G M+ SG + +T DG +L + + P A ++A
Sbjct: 36 RAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQPAARMLAELSRSQDAA 95
Query: 252 XXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEVA-RE 428
V+L G LL++A +S G HP + +++EVL +M IPIE++ R+
Sbjct: 96 AGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHRLATRAVEVLHAMAIPIELSDRD 155
Query: 429 NLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKP--VDLHMVEIMEMKHKTATET 602
+LV A T+L +KV + +L+ VDA L++ P P +DL + +++ T +T
Sbjct: 156 SLVKSASTALNSKVVSQYSSLLSPLAVDAALSVVDPAHPDLLDLRDIRVVKKLGGTVDDT 215
Query: 603 VLVKGLXMDHGARH 644
L++GL D A H
Sbjct: 216 ELIRGLIFDKKASH 229
>10_08_0620 - 19321612-19323237
Length = 541
Score = 93.1 bits (221), Expect = 2e-19
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 7/198 (3%)
Frame = +3
Query: 72 KGIQAVMXTXLGPKGTXXMLVS----GAGXIKLTKDGNVLLHXLQIQHPTASLIARXXXX 239
+ + A T LGP+G M+ S G + +T DG +L + + P A ++A
Sbjct: 36 RAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPLLQPAARMLADLSRS 95
Query: 240 XXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEV 419
V+L G LL++A +S G HP + + +++EVL M IP+E+
Sbjct: 96 QDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARAVEVLHGMAIPVEL 155
Query: 420 A-RENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKP--VDLHMVEIMEMKHKT 590
+ R+ LV A T+L +KV + +L+ VDA L + P P +DL + +++ T
Sbjct: 156 SDRDALVKSASTALNSKVVSQYSTLLSPLAVDAALAVVDPAHPYLLDLRDIRVVKKLGCT 215
Query: 591 ATETVLVKGLXMDHGARH 644
+T L++GL ++ A H
Sbjct: 216 VDDTELIRGLVLNKKASH 233
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 87.4 bits (207), Expect = 9e-18
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 4/196 (2%)
Frame = +3
Query: 72 KGIQAVMXTXLGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXX 251
K + ++ T LGPKG ML S G + +T DG +L + + + A L+
Sbjct: 38 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSCSQDYE 97
Query: 252 XXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEVAREN 431
V++ G LL+QA+ + G+HP I EG+++A + + LE + E + N
Sbjct: 98 IGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAFDHLEHISHKFEFSATN 157
Query: 432 ---LVDVARTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHMVEIMEMKHKTATE 599
LV T+L +K+ L + V AVL + K V+L ++++ +
Sbjct: 158 IEPLVQTCMTTLSSKIVNRCKRTLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLED 217
Query: 600 TVLVKGLXMDHGARHP 647
T LV G+ +D HP
Sbjct: 218 TELVYGIIVDKDMSHP 233
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 87.0 bits (206), Expect = 1e-17
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Frame = +3
Query: 72 KGIQAVMXTXLGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXX 251
K + ++ T LGP+ ML+ AG I +T DGN +L L + HP A +
Sbjct: 31 KAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCILRELDLAHPAAKSMIELSRTQDEE 90
Query: 252 XXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEV-ARE 428
++L GE+L A FI + HP +I + A + +L VL+ + IP++V R
Sbjct: 91 VGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVICRAYTKALDDALSVLDKIAIPVDVDDRV 150
Query: 429 NLVDVARTSLKTKVHPSLADVLTDACVDAVLT 524
++ + ++S+ TK D++ D +DA T
Sbjct: 151 AMLGLVKSSIGTKFTGQFGDLIADLAIDATTT 182
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 81.4 bits (192), Expect = 6e-16
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Frame = +3
Query: 72 KGIQAVMXTXLGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXX 251
K + ++ T LGP+ ML+ +G I +T DGN +L + I HP A +
Sbjct: 31 KAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILREIDIAHPAAKSMIELSRTQDEE 90
Query: 252 XXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEV-ARE 428
++L GE+L A+ FI + HP +I + A +L VL+ + + ++V R
Sbjct: 91 VGDGTTSVIVLAGEMLHVAEAFIDKHYHPTVICRAYTKALEDALAVLDKIAMHVDVNDRA 150
Query: 429 NLVDVARTSLKTKVHPSLADVLTDACVDAVLT 524
++ + ++S+ TK D++ D +DA T
Sbjct: 151 AMLGLVKSSIGTKFTGQFGDLIADLAIDATTT 182
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 75.4 bits (177), Expect = 4e-14
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 6/190 (3%)
Frame = +3
Query: 78 IQAVMXTXLGPKGTXXMLVS-GAGX-IKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXX 251
I ++ T LGPKG +L S G G + +T DG +L L I +P A ++
Sbjct: 28 IADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDE 87
Query: 252 XXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF----DIARNKSLEVLESMKIPIEV 419
V+L GELL++A+ ++ +HP I G+ + ARN LE K I+
Sbjct: 88 VGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIAGYRMAVECARNALLERTMDNKENIDK 147
Query: 420 ARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATE 599
R +L+++A T+L +K+ + + VDAVL ++ +L ++I+++ + +
Sbjct: 148 FRSDLMNIAMTTLSSKILSQDKEYFAELAVDAVLRLK---GSTNLEAIQILKIPGGSLKD 204
Query: 600 TVLVKGLXMD 629
+ L +G +D
Sbjct: 205 SFLDEGFILD 214
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 67.7 bits (158), Expect = 7e-12
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 5/180 (2%)
Frame = +3
Query: 96 TXLGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXXXXXXXXXX 275
T LGP+G ++ G ++ DG ++ L I HP A ++
Sbjct: 41 TTLGPRGMDKLIHDDKGGTTISNDGATIMRLLDIIHPAAKILVDIAKSQDSEVGDGTTTV 100
Query: 276 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPI-----EVARENLVD 440
VLL E LK+A +I +G+HP + + A + ++E ++ + I E +E L
Sbjct: 101 VLLAAEFLKEAKPYIEDGVHPHSLIRSYRTAGHLAIEKVKDLATSIEGKSLEEKKELLAK 160
Query: 441 VARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGL 620
A T+L +K+ + VDAVL I + L+++ I ++ T ++ LV G+
Sbjct: 161 CAATTLSSKLIGGEKEFFASMVVDAVLAISNDDR---LNLLGIKKVPGGTMRDSFLVNGV 217
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 66.9 bits (156), Expect = 1e-11
Identities = 47/194 (24%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Frame = +3
Query: 78 IQAVMXTXLGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXXXX 257
+ A+ T LGP G M+++ + +T D +++ L++QHP A ++
Sbjct: 34 LSAITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKILVLAGRAQQEEIG 93
Query: 258 XXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM----KIPIEVA- 422
+ GELL++A+ I GLHP I G+ A NK++E+LE + ++V
Sbjct: 94 DGANLTISFAGELLEKAEELIRMGLHPSEIIIGYTKAINKTVEILEDLVEKGSENMDVRN 153
Query: 423 RENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHM--VEIMEMKHKTAT 596
+E +V + R+++ +K D+L DA + + P P + ++ V + ++
Sbjct: 154 KEEVVLLMRSAVASKQF-GQEDILCPLVADACMQV-CPKNPANFNVDNVRVAKLLGGGLH 211
Query: 597 ETVLVKGLXMDHGA 638
+ +V+G+ + + A
Sbjct: 212 NSSVVRGMVLKNDA 225
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 51.6 bits (118), Expect = 5e-07
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 2/186 (1%)
Frame = +3
Query: 78 IQAVMXTXLGPKGTXXMLVS-GAGX-IKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXX 251
I ++ T LGPKG +L S G G + +T DG +L L I +P A ++
Sbjct: 29 ISDLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDE 88
Query: 252 XXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEVAREN 431
V+L GELL++A+ ++ +HP M I + R +
Sbjct: 89 VGDGTTSVVVLAGELLREAEKLVNMKIHP--------------------MTIIADKFRSD 128
Query: 432 LVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLV 611
L+++A T+L +K+ + VDAVL ++ +L ++I++ + ++ L
Sbjct: 129 LMNIAMTTLSSKILSQDKEYFAGLAVDAVLRLK---GSTNLEAIQILKKTGGSLKDSFLD 185
Query: 612 KGLXMD 629
+G +D
Sbjct: 186 EGFILD 191
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/83 (26%), Positives = 38/83 (45%)
Frame = +3
Query: 126 MLVSGAGXIKLTKDGNVLLHXLQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQ 305
MLV G + +T DG +L L+++HP A ++ V++ ELLK+
Sbjct: 1 MLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKR 60
Query: 306 ADIFISEGLHPRIITEGFDIARN 374
+ + +HP I G+ + N
Sbjct: 61 GNDLVRNKIHPTSIISGYRLQYN 83
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 39.1 bits (87), Expect = 0.003
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 8/166 (4%)
Frame = +3
Query: 102 LGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPT----ASLIARXXXXXXXXXXXXXX 269
LGPKG +L S G K+ DG + ++++ P A L+ +
Sbjct: 83 LGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTT 142
Query: 270 XXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEVARENLVDVAR 449
V+L ++ + ++ G +P IT G I + V E K+ EV L DVA
Sbjct: 143 TSVVLAQGMITEGVKVVAAGANPVQITRG--IEKTAKALVSELQKMSKEVEDSELADVAA 200
Query: 450 TSL--KTKVHPSLADVLTDACVDAVLTIRTPGKPVD--LHMVEIME 575
S ++ +A+ + V+T+ GK + L++VE M+
Sbjct: 201 VSAGNNYEIGNMIAEAMNKVGRQGVVTLE-EGKSAENNLYVVEGMQ 245
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 37.9 bits (84), Expect = 0.007
Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 7/167 (4%)
Frame = +3
Query: 102 LGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPT----ASLIARXXXXXXXXXXXXXX 269
LGPKG +L S G ++ DG + ++++ P A L+ +
Sbjct: 87 LGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTT 146
Query: 270 XXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEVARENLVDVAR 449
V+L L+ + ++ G +P IT G + +E L+ K+ EV L DVA
Sbjct: 147 TSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEELK--KLSKEVEDSELADVAA 204
Query: 450 TSL--KTKVHPSLADVLTDACVDAVLTIRT-PGKPVDLHMVEIMEMK 581
S ++ +A+ ++ V+T+ +L++VE M+ +
Sbjct: 205 VSAGNNYEIGNMIAEAMSKVGRKGVVTLEEGRSSENNLYVVEGMQFE 251
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +3
Query: 276 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEVARENLVDVARTS 455
++L E++ + ++ G +P + +G D A ++ + +L++ IP+ +E++ VA S
Sbjct: 655 IILAREIINLGLLAVATGANPVALRKGIDKAVHELIGILKTKCIPVS-TKEDIKAVASIS 713
Query: 456 LKTK--VHPSLADVLTDACVDAVLTIRT 533
V +AD L D ++ I +
Sbjct: 714 AGNDEYVGDLIADALEKIGPDGIIKIES 741
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 29.1 bits (62), Expect = 3.2
Identities = 32/166 (19%), Positives = 71/166 (42%), Gaps = 7/166 (4%)
Frame = +3
Query: 102 LGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQ----IQHPTASLIARXXXXXXXXXXXXXX 269
+GPKG ++ G K+TKDG + ++ +++ ASL+ +
Sbjct: 100 MGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFSNRVKNVGASLVKQVANATNDTAGDGTT 159
Query: 270 XXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEVARE-NLVDVA 446
+L + + ++ G++ + G +A ++ + L+ M I + E V
Sbjct: 160 CATVLTKAIFAEGCKSVAAGMNAMDLRRGISMAVDEVVTNLKGMARMISTSEEIAQVGTI 219
Query: 447 RTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPV--DLHMVEIMEM 578
+ + ++ +A + + V+TI T G + +L +VE M++
Sbjct: 220 SANGEREIGELIAKAMEKVGKEGVITI-TDGNTLYNELEVVEGMKL 264
>11_06_0713 +
26524984-26525276,26526008-26526434,26526550-26527171,
26528059-26528099,26528181-26528249,26528565-26528665,
26529300-26529378,26529955-26530053,26530129-26530197,
26530326-26530375,26530482-26530548,26531031-26531125,
26534469-26534856
Length = 799
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 388 TSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRRTV 272
TS + + +KP V + G K L+N +C S P++ +
Sbjct: 195 TSGKVYPSSAKPRVQLNGSKSGLLNKVSCDSQQPLQSAI 233
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 27.9 bits (59), Expect = 7.4
Identities = 32/165 (19%), Positives = 66/165 (40%), Gaps = 5/165 (3%)
Frame = +3
Query: 102 LGPKGTXXMLVSGAGXIKLTKDGNVLLHXLQIQHPT----ASLIARXXXXXXXXXXXXXX 269
+GPKG ++ K+TKDG + ++ + A+L+ +
Sbjct: 147 MGPKGRNVIIERSHRAPKVTKDGVTVAKSIEFEDSAKNVGANLVKQVAEATNKVAGDGTT 206
Query: 270 XXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEVARE-NLVDVA 446
+L +L + ++ G++ + G + A + L+S I + E N V
Sbjct: 207 CATVLTQAILTEGCKAVAAGVNVMDLRNGINKAISSITTHLKSKAWIINSSEEINQVATI 266
Query: 447 RTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMK 581
+ + ++ ++ + D V+TI T GK +D + + MK
Sbjct: 267 SANGEKEIGDLISKAMEKVGKDGVITI-TDGKTLDNELEAVQGMK 310
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,580,831
Number of Sequences: 37544
Number of extensions: 292523
Number of successful extensions: 656
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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