Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_G09
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028423-1|AAK27730.1|  852|Homo sapiens PRIP-interacting protei...    30   7.0  
AF432215-1|AAL99922.1|  853|Homo sapiens CLL-associated antigen ...    30   7.0  
AF286340-1|AAK83025.1|  853|Homo sapiens hepatocellular carcinom...    30   7.0  

>AY028423-1|AAK27730.1|  852|Homo sapiens PRIP-interacting protein
           PIPMT protein.
          Length = 852

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = +3

Query: 210 ERAWRKQWLKXQVLAAHEPVHVEEYWRERT 299
           + +WRK++ +  +LA+ +P  +E+Y   RT
Sbjct: 139 QESWRKEYEEDDILASDDPSSIEQYENTRT 168


>AF432215-1|AAL99922.1|  853|Homo sapiens CLL-associated antigen
           KW-2 protein.
          Length = 853

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = +3

Query: 210 ERAWRKQWLKXQVLAAHEPVHVEEYWRERT 299
           + +WRK++ +  +LA+ +P  +E+Y   RT
Sbjct: 139 QESWRKEYEEDDILASDDPSSIEQYENTRT 168


>AF286340-1|AAK83025.1|  853|Homo sapiens hepatocellular
           carcinoma-associated antigen 137 protein.
          Length = 853

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = +3

Query: 210 ERAWRKQWLKXQVLAAHEPVHVEEYWRERT 299
           + +WRK++ +  +LA+ +P  +E+Y   RT
Sbjct: 139 QESWRKEYEEDDILASDDPSSIEQYENTRT 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,952,860
Number of Sequences: 237096
Number of extensions: 2086634
Number of successful extensions: 4124
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4124
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)