Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_G09
         (704 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68303-4|CAA92637.1|  210|Caenorhabditis elegans Hypothetical pr...    75   4e-14
U80030-4|AAG24162.2|  370|Caenorhabditis elegans Serpentine rece...    29   4.3  
U97592-4|AAB52872.1|  450|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U80030-6|AAG24164.1|  367|Caenorhabditis elegans Serpentine rece...    28   5.7  

>Z68303-4|CAA92637.1|  210|Caenorhabditis elegans Hypothetical
           protein ZK809.3 protein.
          Length = 210

 Score = 75.4 bits (177), Expect = 4e-14
 Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
 Frame = +3

Query: 168 VASEREXCLGMTDAERAWRKQWLKXQVLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLFA 347
           +A ER    G++ AER WRK+W+  Q L A EPV V+   R+  NPIR  YR P D  + 
Sbjct: 47  MADERVRAAGLSPAEREWRKKWVHDQHLHADEPVVVDAVHRQ-LNPIRTAYRLPWDKFYL 105

Query: 348 K-LTPMLGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGNDWTKKGGWKVLKTKPMV 518
             L P  G       R  + KL +  V + + +YY+KY   DWT   G + +  K ++
Sbjct: 106 HYLKPTFGVYYGTAIRVTAPKLLMAFVVVQTAYYYWKYEVKDWTHLRGLESMPQKEVI 163


>U80030-4|AAG24162.2|  370|Caenorhabditis elegans Serpentine
           receptor, class w protein120 protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = -1

Query: 626 CLSIKLFLNNRALEFPFSVIRIGFL-RFEWESRLSRKNHWFGF 501
           C++I  F+    +EFP+  + +GFL  F+++S +SR   +FGF
Sbjct: 275 CVTITFFI----VEFPYG-LSLGFLWMFDYDSGISRILSYFGF 312


>U97592-4|AAB52872.1|  450|Caenorhabditis elegans Hypothetical
           protein C14A11.5 protein.
          Length = 450

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 246 VLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLFAKLTPMLGEQRAAHYRY 395
           V+ AH  V   +YW++ T P    Y +   +LF K  P + +    + RY
Sbjct: 373 VVKAHI-VRKLDYWKKSTQPQAAHYTEMYQLLFEKCGPSISDVIMNYMRY 421


>U80030-6|AAG24164.1|  367|Caenorhabditis elegans Serpentine
           receptor, class w protein119 protein.
          Length = 367

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = -1

Query: 626 CLSIKLFLNNRALEFPFSVIRIGFL-RFEWESRLSRKNHWFGF 501
           C++I  F+    +EFP+  + +GFL  F+++S +SR   +FGF
Sbjct: 277 CVTITFFI----VEFPYG-LSLGFLWMFDYDSGISRILSFFGF 314


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,385,651
Number of Sequences: 27780
Number of extensions: 323849
Number of successful extensions: 877
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)