Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_G08
(549 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 171 2e-43
04_04_0417 - 25052305-25052398,25052583-25052672,25052740-250529... 163 8e-41
07_03_0920 - 22603868-22603964,22604110-22604222,22604281-226044... 161 4e-40
04_04_1134 + 31137326-31137337,31137964-31138004,31138089-311381... 161 4e-40
04_04_1135 + 31140032-31140043,31140552-31140592,31140680-311407... 149 2e-36
07_03_0919 - 22594980-22595111,22595398-22595427,22595522-225955... 106 1e-23
08_02_0383 - 16539472-16539633,16543044-16543205 44 6e-05
04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062... 37 0.012
01_06_0171 - 27190072-27190645,27190800-27190955,27191932-27192359 31 0.80
09_06_0220 + 21644642-21647293 29 1.8
03_05_0248 + 22348504-22348568,22349064-22349371,22349476-223500... 29 3.2
11_06_0289 - 21969248-21973516 28 5.6
11_06_0185 + 21018045-21022307 28 5.6
10_02_0135 + 5674786-5675040,5675179-5675490,5676505-5677010,567... 27 7.5
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 27 7.5
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 27 9.9
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 171 bits (417), Expect = 2e-43
Identities = 76/110 (69%), Positives = 91/110 (82%)
Frame = +3
Query: 138 YHKDVGLGFKPPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 317
+ K++GLGFK PREAIEGTYIDKKCPFTG VSIRGRI+ G KM RTI++RR+YLH+
Sbjct: 26 FWKNIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHF 85
Query: 318 LPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 467
+ KY R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNV+KV
Sbjct: 86 VKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVIKV 134
>04_04_0417 -
25052305-25052398,25052583-25052672,25052740-25052905,
25053547-25053647,25053735-25053775,25054170-25054181
Length = 167
Score = 163 bits (396), Expect = 8e-41
Identities = 77/117 (65%), Positives = 91/117 (77%), Gaps = 7/117 (5%)
Frame = +3
Query: 138 YHKDVGLGFKPPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 317
+ K++GLGFK PREAIEGTYIDKKCPFTG VSIRGRI+ G KM RTI++RR+YLH+
Sbjct: 35 FWKNIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHF 94
Query: 318 LPKYNR-------FEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 467
+ KY R +EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 95 VKKYQRQVNLVAGYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 150
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 37 MAXHPERSFQKQPPVFLXPQ 96
MA ER+F KQP VFL P+
Sbjct: 1 MAEQTERAFLKQPKVFLCPK 20
>07_03_0920 -
22603868-22603964,22604110-22604222,22604281-22604429,
22604732-22604832,22604917-22604957,22605584-22605595
Length = 170
Score = 161 bits (390), Expect = 4e-40
Identities = 77/119 (64%), Positives = 90/119 (75%), Gaps = 9/119 (7%)
Frame = +3
Query: 138 YHKDVGLGFKPPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 317
+ K +GLGFK PREAIEGTYIDKKCPFTG VSIRGRI+ G KM RTI++RR+YLH+
Sbjct: 35 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHF 94
Query: 318 LPKYN---------RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 467
+ KY R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 95 VKKYQRQGANLPPCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 152
>04_04_1134 +
31137326-31137337,31137964-31138004,31138089-31138189,
31138489-31138637,31138696-31138808,31138954-31139050
Length = 170
Score = 161 bits (390), Expect = 4e-40
Identities = 77/119 (64%), Positives = 90/119 (75%), Gaps = 9/119 (7%)
Frame = +3
Query: 138 YHKDVGLGFKPPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 317
+ K +GLGFK PREAIEGTYIDKKCPFTG VSIRGRI+ G KM RTI++RR+YLH+
Sbjct: 35 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHF 94
Query: 318 LPKYN---------RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 467
+ KY R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 95 VKKYQRQGANLPPCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 152
>04_04_1135 +
31140032-31140043,31140552-31140592,31140680-31140780,
31141113-31141419,31141565-31141661
Length = 185
Score = 149 bits (360), Expect = 2e-36
Identities = 77/134 (57%), Positives = 90/134 (67%), Gaps = 24/134 (17%)
Frame = +3
Query: 138 YHKDVGLGFKPPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 317
+ K +GLGFK PREAIEGTYIDKKCPFTG VSIRGRI+ G KM RTI++RR+YLH+
Sbjct: 35 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHF 94
Query: 318 LPKYN------------------------RFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 425
+ KY R+EKRH N+ H+SPCFR V+ GD V IG+C
Sbjct: 95 VKKYQRQVNNYGFYLCFFSFFFPISDLGCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQC 153
Query: 426 RPLSKTVRFNVLKV 467
RPLSKTVRFNVLKV
Sbjct: 154 RPLSKTVRFNVLKV 167
>07_03_0919 -
22594980-22595111,22595398-22595427,22595522-22595587,
22596021-22596107,22596868-22596921,22597696-22597762,
22598099-22598215,22598536-22598637,22598784-22598902,
22598966-22599049,22599220-22599354,22599470-22599505,
22599581-22599700,22600557-22600645,22601507-22601596,
22601629-22601802,22602135-22602235,22602323-22602363,
22602872-22602883
Length = 551
Score = 106 bits (254), Expect = 1e-23
Identities = 45/66 (68%), Positives = 53/66 (80%)
Frame = +3
Query: 138 YHKDVGLGFKPPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 317
+ K +GLGFK PREAIEGTYIDKKCPFTG VSIRGRI+ G KM RTI++RR+YLH+
Sbjct: 35 FWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHF 94
Query: 318 LPKYNR 335
+ KY R
Sbjct: 95 VKKYQR 100
>08_02_0383 - 16539472-16539633,16543044-16543205
Length = 107
Score = 44.4 bits (100), Expect = 6e-05
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +3
Query: 249 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 428
+ G+V KMQ+++V+ D L + YNR+ KR H D IGD V + R
Sbjct: 4 VVGIVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAHDET--EDCNIGDRVKLDPSR 61
Query: 429 PLSKTVRFNVLKV 467
PLSK + V ++
Sbjct: 62 PLSKRKHWVVAEI 74
>04_04_1693 + 35404336-35404515,35405732-35406019,35406189-35406278,
35406487-35406564,35406638-35406718,35407300-35407350,
35407788-35407933,35408169-35408235,35408328-35408387,
35408472-35408501,35408776-35408835,35408936-35409052,
35409790-35409903,35410068-35410166,35410572-35410697,
35410774-35410848,35410958-35411029,35411167-35411277,
35411760-35411843,35413149-35413256,35414207-35414308,
35414393-35414455,35414524-35414598,35414901-35414972,
35415063-35415187,35415251-35415302,35415380-35415448,
35415525-35415540,35415941-35415989,35416607-35417180
Length = 1077
Score = 36.7 bits (81), Expect = 0.012
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +3
Query: 249 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 428
LTG V K +T+ + L PKY R E+ + H P ++GD+V + R
Sbjct: 972 LTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPD-NQFKVGDVVELRRSR 1029
Query: 429 PLSKTVRF 452
P+SKT F
Sbjct: 1030 PISKTKHF 1037
>01_06_0171 - 27190072-27190645,27190800-27190955,27191932-27192359
Length = 385
Score = 30.7 bits (66), Expect = 0.80
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 27 VKQNGGSSGTLIPKTTSSLSXTASQGLG 110
V GG + L P TTSS+S ++S+G+G
Sbjct: 72 VAAGGGGAPPLTPNTTSSMSTSSSEGVG 99
>09_06_0220 + 21644642-21647293
Length = 883
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/97 (22%), Positives = 43/97 (44%)
Frame = +3
Query: 9 RCFFSFVKQNGGSSGTLIPKTTSSLSXTASQGLGVXRSXKPLSYHKDVGLGFKPPREAIE 188
R F ++Q G + + K+ SSL A + G Y D+G G P + +
Sbjct: 496 REFLQLLEQGDGKA--TLAKSVSSLKSGAKRDTGGAADASAACYISDLGKGLGPIVQTRD 553
Query: 189 GTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 299
G Y+ PF ++ + + L + M++ + +++R
Sbjct: 554 GGYLAATNPF--DIPVERKELPKLA--MQLSKPVILR 586
>03_05_0248 +
22348504-22348568,22349064-22349371,22349476-22350039,
22350082-22350128,22351244-22351715,22352349-22352611
Length = 572
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 183 IEGTYIDKKCPFTGNVSIRGRILTGVVQKM-KMQRTIVIRRDYLHYLPKY 329
+ GT PFTG++S G + + KM + +V +DYLH K+
Sbjct: 461 VRGTEDAPITPFTGDMSQSGDAIVAALMKMLAINPHLVTDKDYLHTAMKH 510
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 261 VQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 395
++KM + T + +H LPK+ E + LS CF +VE
Sbjct: 1251 LEKMVLSSTCIESISGVHGLPKFEELELNSSSCGRLLSSCFYNVE 1295
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 261 VQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 395
++KM + T + +H LPK+ E + LS CF +VE
Sbjct: 1249 LEKMVLSSTCIESISGVHGLPKFEELELNSSSCGRLLSSCFYNVE 1293
>10_02_0135 +
5674786-5675040,5675179-5675490,5676505-5677010,
5677057-5677103,5677457-5677918,5678071-5678294
Length = 601
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 35 KWRXIRNAHSKNNLQSFLXRKSRSWCXAEHXTVELPQGCGP 157
K + + N H NNL R+ ++WC E L GC P
Sbjct: 134 KVQKVVNRHQLNNLWDTCRRQFQTWCWLESMATGL--GCCP 172
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 42 GSSGTLIPKTTSSLSXTASQGLGVXRSXKPLSY 140
G G +PKT + + G+ +S KPLSY
Sbjct: 59 GLFGNTVPKTAENFRAICTGEKGLGKSGKPLSY 91
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 438 WTKVCIRRSLQYHQSPRP*SKATNVRTCSCAVSRTY 331
W C RR Y +SP P + R+ S + SR+Y
Sbjct: 129 WKNRCYRRGRSYSRSPSPRRGRSRGRSYSRSRSRSY 164
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,829,285
Number of Sequences: 37544
Number of extensions: 267789
Number of successful extensions: 622
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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