Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_G08
         (549 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...   177   3e-46
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   3.8  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   8.8  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   8.8  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   8.8  

>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score =  177 bits (430), Expect = 3e-46
 Identities = 82/113 (72%), Positives = 95/113 (84%)
 Frame = +3

Query: 126 KPLSYHKDVGLGFKPPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRD 305
           K L  H  +GLGFK P+EAI GTYIDKKCPFTG++SIRGRILTGVV+K  +   + IRRD
Sbjct: 27  KGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGHISIRGRILTGVVRKCIV--LLYIRRD 84

Query: 306 YLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 464
           YL ++ KY+ FEKR+RNM +HLSPCFRDVE GDIVT+GECRPLSKTVRFNVLK
Sbjct: 85  YLQFIRKYDTFEKRNRNMRLHLSPCFRDVEAGDIVTLGECRPLSKTVRFNVLK 137


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 254  GEDAAADRNVASEGTLLVNVGT 189
            GED   D+   S+GTLL  +GT
Sbjct: 1268 GEDDTGDKKTDSDGTLL-EIGT 1288


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -2

Query: 113 HTKTLTCGXRKTGGCFWNERS 51
           HTKT     RKT G  W  RS
Sbjct: 199 HTKTKNGCCRKTCGTGWKYRS 219


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +3

Query: 30   KQNGGSSGTLIPKTTSSLSXTAS 98
            +++GG  G + P+TT+ LS +++
Sbjct: 1144 RRSGGGGGPVNPQTTALLSASST 1166


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
            protein.
          Length = 973

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -2

Query: 167  LETEAHILVVAQRFXAPLHTKTLTCGXRKTG 75
            +E+  H+L    RF    H  T+ CG    G
Sbjct: 915  VESTEHVLFHCPRFAEERHEITVKCGTTING 945


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,340
Number of Sequences: 2352
Number of extensions: 9422
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)