Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_G08
         (549 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC...   201   4e-52
AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA...   201   4e-52
AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB...   196   2e-50
AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p pro...    31   0.78 
AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-P...    31   0.78 
AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-P...    31   0.78 

>AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC,
           isoform C protein.
          Length = 155

 Score =  201 bits (491), Expect = 4e-52
 Identities = 95/114 (83%), Positives = 103/114 (90%)
 Frame = +3

Query: 126 KPLSYHKDVGLGFKPPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRD 305
           K L   +DVGLGFK PREAI+GTYIDKKCP+TG+V IRGRILTGVV+K KMQRTIVIRRD
Sbjct: 29  KLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRD 88

Query: 306 YLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 467
           YLH++ KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 89  YLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142


>AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA,
           isoform A protein.
          Length = 155

 Score =  201 bits (491), Expect = 4e-52
 Identities = 95/114 (83%), Positives = 103/114 (90%)
 Frame = +3

Query: 126 KPLSYHKDVGLGFKPPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRD 305
           K L   +DVGLGFK PREAI+GTYIDKKCP+TG+V IRGRILTGVV+K KMQRTIVIRRD
Sbjct: 29  KLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRD 88

Query: 306 YLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 467
           YLH++ KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 89  YLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142


>AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB,
           isoform B protein.
          Length = 154

 Score =  196 bits (478), Expect = 2e-50
 Identities = 89/110 (80%), Positives = 101/110 (91%)
 Frame = +3

Query: 138 YHKDVGLGFKPPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 317
           +++ +GLGF+ P EAI+GTYIDKKCP+TG+V IRGRILTGVV+K KMQRTIVIRRDYLH+
Sbjct: 32  FYRQIGLGFRAPAEAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHF 91

Query: 318 LPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 467
           + KY+RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 92  VRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 141


>AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p
           protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +3

Query: 231 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 371
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-PB,
           isoform B protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +3

Query: 231 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 371
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-PA,
           isoform A protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +3

Query: 231 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 371
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,746,581
Number of Sequences: 53049
Number of extensions: 439206
Number of successful extensions: 990
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)