Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_F18
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 201 8e-53
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 199 3e-52
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 175 5e-45
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 164 1e-41
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 143 2e-35
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 142 5e-35
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 129 3e-31
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 118 8e-28
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 109 3e-25
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 87 2e-18
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 85 7e-18
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 79 8e-16
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 76 5e-15
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 75 1e-14
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 74 2e-14
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 64 2e-11
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 63 4e-11
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 60 4e-10
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 43 5e-05
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 43 5e-05
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 41 1e-04
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 37 0.002
SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces... 30 0.35
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 26 4.3
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 4.3
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 5.7
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 7.5
SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces po... 25 9.9
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 25 9.9
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 201 bits (490), Expect = 8e-53
Identities = 95/171 (55%), Positives = 126/171 (73%)
Frame = +2
Query: 155 CVKMAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKL 334
C + Y YLFK ++IGD+GVGKS LL++FT F TIGVEF R I +D K+IK
Sbjct: 2 CQEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKA 61
Query: 335 QIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLI 514
QIWDTAGQE +R+IT +YYRGA GAL+VYDIT++ +F+++ WL++ R+H++SN+VIML+
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLV 121
Query: 515 GNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIY 667
GNK+DL R V EE +AFA E+ L F+ETSA A+NVEEAF EI+
Sbjct: 122 GNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIF 172
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 199 bits (485), Expect = 3e-52
Identities = 90/166 (54%), Positives = 124/166 (74%)
Frame = +2
Query: 167 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 346
+Y YL K ++IGD+GVGKSCLLL+F++ F P TIG++F R I +DGK+IKLQIWD
Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 347 TAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKS 526
TAGQE FR+IT +YYRGA G LL+YD+T +++F+++ TW + QH++ N+ +LIGNK
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKC 124
Query: 527 DLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEI 664
D E +R+V E+G+A A E G+ F+E SAKT NV+EAF A+EI
Sbjct: 125 DCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 175 bits (426), Expect = 5e-45
Identities = 78/165 (47%), Positives = 118/165 (71%)
Frame = +2
Query: 170 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 349
Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R ++GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDT 64
Query: 350 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD 529
AGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL++ +++ + +L+GNKSD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSD 124
Query: 530 LESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEI 664
+ ++ V+ + FA + F+ETSAK + NVE+AF+ +++I
Sbjct: 125 MVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 164 bits (398), Expect = 1e-41
Identities = 79/173 (45%), Positives = 116/173 (67%), Gaps = 5/173 (2%)
Frame = +2
Query: 161 KMAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI----DGKQI 328
K +Y YL K ++ G +G GKSCLL +F ++ T+G++F +R+I++ K+I
Sbjct: 3 KESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRI 62
Query: 329 KLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIM 508
KLQIWDTAGQE FRS+ R+YYRGAAGA+LVYD+T +++F L++WL D R + S + ++
Sbjct: 63 KLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVV 122
Query: 509 LIGNKSDLESRREVKKEEGEAFARE-HGLVFMETSAKTAANVEEAFINTAKEI 664
L G+KSDL+++R+V EE F E H ETS+ T +NVEE F++ I
Sbjct: 123 LAGSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTI 175
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 143 bits (346), Expect = 2e-35
Identities = 64/159 (40%), Positives = 105/159 (66%)
Frame = +2
Query: 182 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 361
FK + +G+ VGK+ L+ +F +F + TIG++F ++ + ++ + ++LQ+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 362 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 541
FRS+ SY R ++ A++VYDIT +F + W+ED R +++I+L+GNK+DL +
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADK 131
Query: 542 REVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAK 658
R+V +EEGE A+E ++ METSAK NV+ F A+
Sbjct: 132 RQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQ 170
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 142 bits (343), Expect = 5e-35
Identities = 70/162 (43%), Positives = 104/162 (64%), Gaps = 2/162 (1%)
Frame = +2
Query: 185 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID-GKQIKLQIWDTAGQE 361
K +++GD+ VGKS L+L+F +F + TIG F + + ID +KL+IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 362 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDL-ES 538
++S+ YYR A A++VYDIT+ + +W+++ ++ + +VI L GNK DL +
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 539 RREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEI 664
RR V+K + EA+A E L+F ETSAKTA NV E F AK++
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 129 bits (312), Expect = 3e-31
Identities = 68/167 (40%), Positives = 106/167 (63%), Gaps = 6/167 (3%)
Frame = +2
Query: 176 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 355
+L K II+G++GVGK+ ++ Q+ +++F + TIG +F + + +D K + LQ+WDTAG
Sbjct: 7 HLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAG 66
Query: 356 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED-ARQHSNSN---MVIMLIGNK 523
QE F+S+ ++YRGA +LVYD+ ++F L +W ++ Q S SN +L+GNK
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNK 126
Query: 524 SDL-ESRREVKKEEGEAFAREHG-LVFMETSAKTAANVEEAFINTAK 658
D+ E +R V K + AF + G + + ETSAK A NV+EAF AK
Sbjct: 127 VDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAK 173
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 118 bits (284), Expect = 8e-28
Identities = 62/170 (36%), Positives = 95/170 (55%), Gaps = 1/170 (0%)
Frame = +2
Query: 158 VKMAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQ 337
++ Y +K +++GD GVGKS L +Q F +D TI + + IDG+ L
Sbjct: 1 MRSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSY-RKKCEIDGEGALLD 59
Query: 338 IWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDA-RQHSNSNMVIMLI 514
+ DTAGQE + ++ Y R G LLVY+IT R +F+ ++T+ + R ++L+
Sbjct: 60 VLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLV 119
Query: 515 GNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEI 664
NK DLE+ R V + EGE A+ +++ETSAK NVEEAF + + I
Sbjct: 120 ANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTI 169
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 109 bits (263), Expect = 3e-25
Identities = 53/160 (33%), Positives = 97/160 (60%), Gaps = 7/160 (4%)
Frame = +2
Query: 185 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 364
K +I+GD+GVGK+CL+ QF +++F + TIG +F + + +D K + LQ+WDTAGQE
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 365 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSN---MVIMLIGNKSDLE 535
F+S+ ++YRGA ++VY++ ++F+ + W ++ ++ + +++GN+ D +
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 536 -SRREVKKEEGEAFAR-EHG--LVFMETSAKTAANVEEAF 643
S+R V + + +HG ++ E SAK NV + F
Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLF 169
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 87.4 bits (207), Expect = 2e-18
Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Frame = +2
Query: 194 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 373
++G VGKS L +Q+ + F + TI F ++ I G++ +I DTAGQ+ +
Sbjct: 11 VLGSRSVGKSSLTVQYVENHFVESYYPTIENTF-SKNIKYKGQEFATEIIDTAGQDEYSI 69
Query: 374 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMV-IMLIGNKSDLESRREV 550
+ + G G +LVY IT + +F + + H+ + V I+++GNKSDL +R V
Sbjct: 70 LNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQRAV 129
Query: 551 KKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEI 664
EEG+A A E + E SA+ NV AF EI
Sbjct: 130 TAEEGKALANEWKCAWTEASARHNENVARAFELIISEI 167
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 85.4 bits (202), Expect = 7e-18
Identities = 47/161 (29%), Positives = 84/161 (52%)
Frame = +2
Query: 182 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 361
FK +++GD G GK+ + + F+ + T+GVE + +I +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 362 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 541
+ YY ++++D+T R T+ ++ W D + N+ I+L GNK D++ R
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVC-ENIPIVLCGNKVDVKER 128
Query: 542 REVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEI 664
+ K + F R+ L + + SAK+ N E+ F+ A+++
Sbjct: 129 K--VKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 167
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 78.6 bits (185), Expect = 8e-16
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 14/172 (8%)
Frame = +2
Query: 185 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 364
K +I+GD GK+CLL+ F+ F V+ T+ + A + +DG+ I+L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHIELALWDTAGQED 66
Query: 365 FRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDLE-- 535
+ + Y + L+ + + E+ +++ W+ + H SN+ I+L+G K DL
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEV-LHFCSNLPILLVGCKVDLRND 125
Query: 536 ----------SRREVKKEEGEAFAREHGLV-FMETSAKTAANVEEAFINTAK 658
S++ + EEG+ A++ G ++E SAK V E F A+
Sbjct: 126 PKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAAR 177
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 75.8 bits (178), Expect = 5e-15
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Frame = +2
Query: 194 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 373
+IGD+ +GK+ L++ + F T+GV F + I+I +I IWD GQ F +
Sbjct: 15 MIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVN 74
Query: 374 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD------LE 535
+ A L ++D++R+ T N + W AR N V +LIG K D E
Sbjct: 75 MLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGF-NKTAVPILIGTKYDHFMTFPRE 133
Query: 536 SRREVKKEEGE-AFAREHGLVFMETSAKTAANVEEAF 643
+ E+ K+ A A + LVF TS + NV++ F
Sbjct: 134 DQEEITKQARRYAKAMKASLVFCSTS--HSINVQKIF 168
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 74.5 bits (175), Expect = 1e-14
Identities = 49/167 (29%), Positives = 88/167 (52%), Gaps = 14/167 (8%)
Frame = +2
Query: 185 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 364
K +I+GD GK+CLL+ F+ F V+ T+ + A + +DG+ ++L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHVELALWDTAGQED 66
Query: 365 FRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDLE-- 535
+ + Y + L+ + + ++ +++ W+ + H S++ I+L+ K+DL
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEV-LHFCSSLPILLVACKADLRND 125
Query: 536 ----------SRREVKKEEGEAFAREHGLV-FMETSAKTAANVEEAF 643
++ V EEG+A A++ G ++E SAKT V E F
Sbjct: 126 PKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVF 172
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 73.7 bits (173), Expect = 2e-14
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 10/168 (5%)
Frame = +2
Query: 185 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 364
K +I+GD GK+ LL FT F V++ TI + I +DG I+L +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQEE 73
Query: 365 FRSITRSYYRGAAGALLVYDITRRETF-NHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 541
+ + Y ++ + + R++ N +T WL + + + ++L+ K DL
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNC-PGVKLVLVALKCDLRGA 132
Query: 542 RE--------VKKEEGEAFAREHGLV-FMETSAKTAANVEEAFINTAK 658
E + EEG A A++ V ++E SAK V EAF A+
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAAR 180
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 63.7 bits (148), Expect = 2e-11
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Frame = +2
Query: 185 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 364
K +++GD GK+ LL FT F + T+ + + +DGK ++L +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDC-RVDGKSVQLALWDTAGQEE 68
Query: 365 FRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHSNSNMVIMLIGNKSDL--- 532
+ + Y A L+ + I ++ +++T W+E+ N+ +L+G K+DL
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLC-PNVPFILVGMKADLRSD 127
Query: 533 -----ESRRE----VKKEEGEAFAREHGL-VFMETSAKTAANVEEAF 643
E RR VK ++ E A+ G +ME S+ T V++ F
Sbjct: 128 PVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVF 174
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 62.9 bits (146), Expect = 4e-11
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Frame = +2
Query: 185 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI--DGKQIKLQIWDTAGQ 358
K +++GD G GK+CLL+ F+ F + T+ + IT + K I+L +WDTAGQ
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENY-ITDITYGPNSKVIELALWDTAGQ 74
Query: 359 EAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHSNSNMVIMLIGNKSDLE 535
E + + Y + LL + I + N++T W + QH I+L+G K+DL
Sbjct: 75 EEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEV-QHFCPRTPIVLVGLKADLR 133
Query: 536 SRR---EVKKEEG---------EAFAREHGLVFMETSAKTAANVEEAF 643
R EV + +G ++ A ++E SAK V E F
Sbjct: 134 KDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVF 181
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 59.7 bits (138), Expect = 4e-10
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Frame = +2
Query: 185 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 364
K +++GD VGK+CLL+ +T +F + T+ + A + I + L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNY-AVTVMIGDEPYTLGLFDTAGQED 63
Query: 365 FRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDLESR 541
+ + Y L+ + +T +F ++ W + H + +++G + DL
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHC-PGVPCLIVGTQIDLRDD 122
Query: 542 REVKK------------EEGEAFAREHGLV-FMETSAKTAANVEEAF 643
V++ E+GE ARE G V ++E SA T ++ F
Sbjct: 123 PSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVF 169
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 42.7 bits (96), Expect = 5e-05
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 293 GARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED 472
G + T++ + I +WD GQ+ R + R Y++ G + V D RE + L+
Sbjct: 50 GFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQR 109
Query: 473 ARQHSNSNMVIMLI-GNKSDL 532
++L+ NK DL
Sbjct: 110 MLNEDELRDALLLVFANKQDL 130
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 42.7 bits (96), Expect = 5e-05
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = +2
Query: 185 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 364
+ +++G GK+ +L + K Q V +TI G + T+ K IK +WD GQ+
Sbjct: 23 RILMLGLDAAGKTTILYKL--KLNQSV--VTIPT-VGFNVETVTYKNIKFNVWDVGGQDK 77
Query: 365 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED-ARQHSNSNMVIMLIGNKSDL 532
R + R Y+ G G + V D + L + +++++ NK DL
Sbjct: 78 IRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDL 134
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 41.1 bits (92), Expect = 1e-04
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Frame = +2
Query: 290 FGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVY----DITRRETFNHLT 457
FG ++ T++ + ++ IWD GQ+ R+ ++Y+ + V D+ E N L
Sbjct: 48 FGFQIRTLEVEGLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQ 107
Query: 458 TWLEDARQHSNSNMVIMLIGNKSDLE---SRREVKKEEG-EAFAREHGLVFMETSAKTAA 625
L + + S I+++ NKSD+ S E+ K + H +F SA T
Sbjct: 108 ELLVEEKLLFTS---ILVLANKSDVSGALSSEEISKILNISKYKSSHWRIF-SVSALTGL 163
Query: 626 NVEEA---FINTAKEI 664
N+++A N KEI
Sbjct: 164 NIKDAISWLANDLKEI 179
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 37.1 bits (82), Expect = 0.002
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Frame = +2
Query: 185 KYIIIGDTGVGKSCLL-LQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 361
K +++G +G GKS + + F++ + L ++ + G + L +WD GQE
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV-LNLWDCGGQE 62
Query: 362 AFR----SITRSY-YRGAAGALLVYDITRRETFNHLTTW---LEDARQHSNSNMVIMLIG 517
AF S R + +R + V+D+ RE L T+ LE +S V LI
Sbjct: 63 AFMENYLSAQRDHIFRNVQVLIYVFDVESREFERDLVTFRNCLEATVANSPQARVFCLI- 121
Query: 518 NKSDL--ESRREVKKEEGEAFARE 583
+K DL E R++ EE +A E
Sbjct: 122 HKMDLVQEDLRDLVFEERKAILLE 145
>SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 29.9 bits (64), Expect = 0.35
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -3
Query: 412 QSASRAPVVRSGDGPKSFLTSCVPNLQLDLLAINCDHPSTKFNTNSEI 269
Q+ + A V S P S+LTSC+P++++ L + P+ F +E+
Sbjct: 358 QTLACAKEVESERAPTSYLTSCLPSIKVILARVLESSPAFGFIERNEL 405
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 479 QHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAK 616
QH N ++V L+G+K L SR + +E +++M + K
Sbjct: 738 QHVNRDLVRNLLGSKGLLRSRCVILSTNSLTVLKEASMIYMLRNGK 783
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 203 DTGVGKSCLLL--QFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 349
D + LLL Q D+ + V +LT+ + G ++ + K ++WD+
Sbjct: 440 DISMQNEALLLRKQENDRLVKQVEELTVALNSGKMNAIVEAESSKNELWDS 490
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 5.7
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 155 CVKMAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFG 295
CV+ + F +++G++G GKS L+ ++ P ++ +FG
Sbjct: 89 CVRQGFN--FNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTGDFG 133
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 7.5
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 191 IIIGDTGVGKSCLL 232
I++GDT GK+C+L
Sbjct: 1873 ILVGDTATGKTCIL 1886
>SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 434
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 191 IIIGDTGVGKSCLLLQFTDKRF 256
++IG TG GKS L +Q KRF
Sbjct: 7 VVIGTTGAGKSDLAVQLA-KRF 27
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +2
Query: 446 NHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEE 562
++ TWL ++ N+N+ + + S L+ + ++KK E
Sbjct: 386 DNTVTWLATWHENINNNVKYVFLAAGSSLKGQSDLKKYE 424
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,492,521
Number of Sequences: 5004
Number of extensions: 50427
Number of successful extensions: 204
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -