Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_F17
(695 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 333 3e-90
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 301 1e-80
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 260 2e-68
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 260 2e-68
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 238 1e-61
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 237 1e-61
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 212 6e-54
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 196 6e-49
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 174 1e-42
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 156 4e-37
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 156 6e-37
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 155 7e-37
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 152 7e-36
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 147 2e-34
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 146 5e-34
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 146 6e-34
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 144 1e-33
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 140 3e-32
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 138 1e-31
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 132 8e-30
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 128 2e-28
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 126 5e-28
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 126 7e-28
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 122 8e-27
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 122 8e-27
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 122 1e-26
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 121 2e-26
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 118 1e-25
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 112 9e-24
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 110 4e-23
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 107 2e-22
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 107 3e-22
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 104 2e-21
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 100 3e-20
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 87 3e-16
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 83 5e-15
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 81 2e-14
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 81 3e-14
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 79 1e-13
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 78 2e-13
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 77 3e-13
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 75 2e-12
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 75 2e-12
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 73 9e-12
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 72 2e-11
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 71 2e-11
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 70 5e-11
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 70 6e-11
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 69 1e-10
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 68 2e-10
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 68 2e-10
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 68 2e-10
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 67 3e-10
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 66 6e-10
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 66 1e-09
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 65 1e-09
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 60 4e-08
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 60 5e-08
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 60 5e-08
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 58 2e-07
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 57 4e-07
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 57 4e-07
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 57 5e-07
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 56 6e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 56 1e-06
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 56 1e-06
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 55 1e-06
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 54 3e-06
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 53 6e-06
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 53 8e-06
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 53 8e-06
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 52 1e-05
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 52 1e-05
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 51 2e-05
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 51 2e-05
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 50 4e-05
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 50 4e-05
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 48 3e-04
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 46 7e-04
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 46 9e-04
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 46 0.001
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 44 0.004
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_Q6CAL1 Cluster: Similar to sp|P33759 Saccharomyces cere... 43 0.006
UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1; ... 40 0.058
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.41
UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2; ... 36 0.72
UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lambl... 36 1.3
UniRef50_UPI00015B5E49 Cluster: PREDICTED: similar to 28S riboso... 35 1.7
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.2
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.2
UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxi... 33 6.7
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 6.7
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 33 6.7
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.7
UniRef50_Q2JDT3 Cluster: Exodeoxyribonuclease III; n=30; Bacteri... 33 8.8
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 333 bits (818), Expect = 3e-90
Identities = 158/185 (85%), Positives = 165/185 (89%)
Frame = +3
Query: 141 KEAQKXWVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 320
K K W+PVTKLGRLV+ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 321 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 500
KQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNK
Sbjct: 114 KQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNK 173
Query: 501 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTL 680
IGKPHTVPCKVTG+CGSV VRLIPAPRGTGIVSAPVP KLL MAG+ DCYTS RG T TL
Sbjct: 174 IGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATL 233
Query: 681 GNFAK 695
GNFAK
Sbjct: 234 GNFAK 238
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 301 bits (738), Expect = 1e-80
Identities = 131/185 (70%), Positives = 162/185 (87%)
Frame = +3
Query: 141 KEAQKXWVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 320
++ +K WVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQ
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQ 86
Query: 321 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 500
KQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG
Sbjct: 87 KQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTA 146
Query: 501 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTL 680
+G PHTVP KV+GKCGSVTVRL+PAPRG G+V+APV + L +AG++DCYT RGST TL
Sbjct: 147 LGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTL 206
Query: 681 GNFAK 695
GNF K
Sbjct: 207 GNFVK 211
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 260 bits (638), Expect = 2e-68
Identities = 121/182 (66%), Positives = 145/182 (79%)
Frame = +3
Query: 150 QKXWVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 329
+K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQT
Sbjct: 32 EKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQT 90
Query: 330 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGK 509
RAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AKLSV+P+RRGYWG +G+
Sbjct: 91 RAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQ 150
Query: 510 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGNF 689
PH++ K TGKCGSVTVRLIPAPRG+GIV++P KLL +AGV+D YT G T TL N
Sbjct: 151 PHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLENT 210
Query: 690 AK 695
K
Sbjct: 211 LK 212
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 260 bits (637), Expect = 2e-68
Identities = 121/179 (67%), Positives = 144/179 (80%)
Frame = +3
Query: 159 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 338
WVP TKLGRLV+ GKI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQKQT AG
Sbjct: 50 WVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAG 109
Query: 339 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHT 518
QR RFKAFV +GD NGHIGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+G+PHT
Sbjct: 110 QRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Query: 519 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGNFAK 695
+P KV GKCGSV VRLIPAPRG GIV++ K+L MAG+ D YT RG T TLGN K
Sbjct: 170 IPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRTLGNSVK 228
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 238 bits (582), Expect = 1e-61
Identities = 114/139 (82%), Positives = 120/139 (86%)
Frame = +3
Query: 162 VPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 341
+PVTKLG L+ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 342 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 521
TRFKAFV IGD NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGNKIGKPHTV
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTV 120
Query: 522 PCKVTGKCGSVTVRLIPAP 578
PCKVTG+C SV V LIPAP
Sbjct: 121 PCKVTGRCSSVLVHLIPAP 139
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 237 bits (581), Expect = 1e-61
Identities = 112/135 (82%), Positives = 120/135 (88%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 471 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCY 650
P+R+GYWGNKIGKP+TVPCKVTG CGSV V LIPAPRGTG+VSAPVP KLL MAG+ DCY
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCY 167
Query: 651 TSXRGSTGTLGNFAK 695
TS R T +LGNFAK
Sbjct: 168 TSARDCTASLGNFAK 182
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 212 bits (518), Expect = 6e-54
Identities = 100/185 (54%), Positives = 128/185 (69%)
Frame = +3
Query: 141 KEAQKXWVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 320
++ + W+P T +GRLV+ KI LE I+ FS I+E EI+D G S+ +EVL I VQ
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQ 74
Query: 321 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 500
KQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI AK ++ PVR G W
Sbjct: 75 KQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLWDGA 134
Query: 501 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTL 680
GKPHTV CK +GKCG+ V++IPAPRGTGI+S V K+ +AG++D YT G+T T
Sbjct: 135 QGKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTT 194
Query: 681 GNFAK 695
NFAK
Sbjct: 195 ENFAK 199
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 196 bits (477), Expect = 6e-49
Identities = 90/118 (76%), Positives = 99/118 (83%)
Frame = +3
Query: 342 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 521
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 522 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGNFAK 695
P KVTG+CGSV VRLIPAPRGTG VSAPVP KLL MAG+ DCYTS RG T T G +
Sbjct: 121 PGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTSARGHTATWGTLPR 178
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 174 bits (424), Expect = 1e-42
Identities = 99/167 (59%), Positives = 116/167 (69%)
Frame = +3
Query: 165 PVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 344
P +KLG LV+ +I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ- 108
Query: 345 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVP 524
+KA GD NGH+ G+ EVA I+ IIL KL ++PV RGY G+K KPHTV
Sbjct: 109 -YYKA----GDYNGHVITGL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTVL 160
Query: 525 CKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRG 665
CKVTG GSV++ LIPAPR T I SAP+P KLL MAG+ DC+TS RG
Sbjct: 161 CKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 156 bits (379), Expect = 4e-37
Identities = 80/183 (43%), Positives = 115/183 (62%), Gaps = 2/183 (1%)
Frame = +3
Query: 153 KXWVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 332
+ W P T++GR+V+ G I + I LP+ E EI+D L P L ++VL + VQ+ +
Sbjct: 14 EAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQRMHK 72
Query: 333 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIG 506
+G+R R++A V +G+ NG++G+G+ SKEV AIR AI AKLS++ VR G W G
Sbjct: 73 SGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCG 132
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGN 686
PH++P G CGSV V L+PAPRG G+V+ V +L +AGV+D +T G T T N
Sbjct: 133 SPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTRTTYN 192
Query: 687 FAK 695
FA+
Sbjct: 193 FAE 195
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 156 bits (378), Expect = 6e-37
Identities = 79/181 (43%), Positives = 118/181 (65%), Gaps = 2/181 (1%)
Frame = +3
Query: 159 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 338
W P T +G LV+ GKI ++ ++ +LPI E EI+D L P L EV+ I VQKQT AG
Sbjct: 13 WKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAG 71
Query: 339 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKP 512
+ +R+K V +G+ +G++ +G +K++ AI+ AI AK++++PVRRG W G+P
Sbjct: 72 EISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCGEP 131
Query: 513 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGNFA 692
H++P KV GK GSV V L+PAP+GTG+V V LL AG++D +++ +G T T NF
Sbjct: 132 HSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTENFV 191
Query: 693 K 695
+
Sbjct: 192 R 192
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 155 bits (377), Expect = 7e-37
Identities = 92/179 (51%), Positives = 113/179 (63%)
Frame = +3
Query: 159 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 338
W+P+TKLG LV+ KI LE IY FSL + + F P+ KQT
Sbjct: 54 WLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEH----------PLIKQTCTD 103
Query: 339 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHT 518
Q+TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV G ++ +PH
Sbjct: 104 QQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATGGKRL-EPHM 155
Query: 519 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGNFAK 695
VPC+VTG+CGS+ V LIPAPRGTG VSAPVP KLL MAG+ D +S G T TLGNF K
Sbjct: 156 VPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCTATLGNFTK 212
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 152 bits (369), Expect = 7e-36
Identities = 85/191 (44%), Positives = 114/191 (59%), Gaps = 6/191 (3%)
Frame = +3
Query: 141 KEAQKXWVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLN----DEVLKI 308
K W P TKLG +V+ G+I + I+ IKE EIID L P +N EVL I
Sbjct: 10 KRVLDEWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDI 68
Query: 309 MPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY 488
+ T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL+++ ++RG
Sbjct: 69 ALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGC 128
Query: 489 --WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXR 662
W + +PH+VP V GK GSV VRLIP PRG G+V V K+L +AGVQD ++
Sbjct: 129 GSWECRCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTF 188
Query: 663 GSTGTLGNFAK 695
G T T NFAK
Sbjct: 189 GETRTTVNFAK 199
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 147 bits (357), Expect = 2e-34
Identities = 78/185 (42%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Frame = +3
Query: 147 AQKXWVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 326
A W P T+LG+ V G+ID ++ LP+KE E++D + P L DEVL I VQ+
Sbjct: 3 ANNGWEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRM 61
Query: 327 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNK 500
T +G+R +F+ VA+G+ +G IG +V AI+ AI +AKL+++ V RG W
Sbjct: 62 TDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECG 121
Query: 501 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTL 680
G+PHTV + GK GSV V L PAPRG G+ K+L +AG++D +T G+T T
Sbjct: 122 CGRPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRTT 181
Query: 681 GNFAK 695
NFAK
Sbjct: 182 VNFAK 186
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 146 bits (354), Expect = 5e-34
Identities = 80/184 (43%), Positives = 114/184 (61%), Gaps = 2/184 (1%)
Frame = +3
Query: 150 QKXWVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 329
++ WVP T LG+ V G+I LE I L I+E II L P L EV+ + +QK T
Sbjct: 43 EEVWVPKTILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKMT 101
Query: 330 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKI 503
GQ TRFKA VA G+ NG++G+G SK++ AI A A L+V P++ G W +
Sbjct: 102 SNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNPIKMGCGSWECRC 161
Query: 504 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLG 683
+ H+VP KV GK GSVT+ +IPAPRG G+V+ +LL +AG++D +T+ +GST T+
Sbjct: 162 DQKHSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGSTPTMN 221
Query: 684 NFAK 695
+ +K
Sbjct: 222 STSK 225
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 146 bits (353), Expect = 6e-34
Identities = 74/180 (41%), Positives = 108/180 (60%), Gaps = 2/180 (1%)
Frame = +3
Query: 159 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 338
W P T+LGRLV G+I + LP+KE++I+D+ + P L DEV+ I Q+ T +G
Sbjct: 5 WTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTDSG 63
Query: 339 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKP 512
+R + +G+ NG++G+G +KE A AI+ AI AKL+++ ++RG W GKP
Sbjct: 64 RRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCGKP 123
Query: 513 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGNFA 692
HT+P V GK GSV+V L PAP+G G+ V +L MAG+ D + G T T N+A
Sbjct: 124 HTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKTTVNYA 183
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 144 bits (350), Expect = 1e-33
Identities = 70/86 (81%), Positives = 73/86 (84%)
Frame = +3
Query: 141 KEAQKXWVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 320
K K W+PVTKLGRLV+ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 88
Query: 321 KQTRAGQRTRFKAFVAIGDNNGHIGL 398
KQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 89 KQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 140 bits (339), Expect = 3e-32
Identities = 75/181 (41%), Positives = 111/181 (61%), Gaps = 2/181 (1%)
Frame = +3
Query: 159 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 338
W P T+LGR V+ G I +E LP+KE EI+D L P L DEVL I VQ+ T +G
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSG 116
Query: 339 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKP 512
+R +F+ VA+G+ +G++G +V AI+ AI +AKL+++ V RG W ++ G
Sbjct: 117 RRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGT 176
Query: 513 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGNFA 692
+++ K GK GSVTV + PAP+G G+ +A +L +AGV+D +T+ G+T T N A
Sbjct: 177 NSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNTRTTVNLA 236
Query: 693 K 695
K
Sbjct: 237 K 237
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 138 bits (334), Expect = 1e-31
Identities = 77/181 (42%), Positives = 109/181 (60%), Gaps = 2/181 (1%)
Frame = +3
Query: 159 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 338
WVP T LG+ V G+I LE I I+E II L P L EV+ + +QK T G
Sbjct: 27 WVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKMTSNG 85
Query: 339 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKP 512
Q TRFKA VA G+ NG++G+G +K++ AI A A L+V P++ G W + +
Sbjct: 86 QSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECRCDQK 145
Query: 513 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGNFA 692
H+VP KV GK GSV + ++PAPRG G+V+ +LL +AG++D YT+ +GST T + +
Sbjct: 146 HSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPTTNSTS 205
Query: 693 K 695
K
Sbjct: 206 K 206
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 132 bits (319), Expect = 8e-30
Identities = 70/172 (40%), Positives = 105/172 (61%), Gaps = 2/172 (1%)
Frame = +3
Query: 186 LVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFV 365
+V GKI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 366 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPHTVPCKVTG 539
+G+++G++GL + KEVA+ IR AI AKL+++PV R G W + G +VP K+TG
Sbjct: 60 VVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVPLKITG 119
Query: 540 KCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGNFAK 695
+ GS V L+PAP G G+V + ++L +AGV D ++ G T T N+A+
Sbjct: 120 RSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRTTINYAQ 171
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 128 bits (308), Expect = 2e-28
Identities = 73/144 (50%), Positives = 89/144 (61%)
Frame = +3
Query: 264 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 443
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 444 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLL 623
IIL + S+ G+ GNKI KPHTV C+VT SV V I APRGT I+SAPVP KLL
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLL 114
Query: 624 XMAGVQDCYTSXRGSTGTLGNFAK 695
MA + D + RG T L N K
Sbjct: 115 RMASIDDGDSLARGCTAILDNVIK 138
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 126 bits (304), Expect = 5e-28
Identities = 89/181 (49%), Positives = 104/181 (57%)
Frame = +3
Query: 153 KXWVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 332
K W+PV KL LVR + L FSL K+ II FFL SL DE IMPVQ QT
Sbjct: 61 KQWMPVIKLCHLVRTWRYRDLP----FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQTW 113
Query: 333 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKP 512
R FK FV+I D + H+ L KCSK+ ATAI VL V +G ++G
Sbjct: 114 LPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI----------VL-VWKGTRETRLGSL 161
Query: 513 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGNFA 692
TV CKVTG+C SV + LIP R I+SAPVP KLL +A + DCYTS RG T TL NF
Sbjct: 162 -TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDNFD 218
Query: 693 K 695
K
Sbjct: 219 K 219
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 126 bits (303), Expect = 7e-28
Identities = 59/161 (36%), Positives = 101/161 (62%)
Frame = +3
Query: 213 LEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 392
L+ ++L + ++++ G SL +V++ + V + T++G++ + K V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 393 GLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIP 572
GLGVK S + I+ A+ AKL++ +RRGYW + GKP+T+ K +GK GSV V + P
Sbjct: 144 GLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKP 203
Query: 573 APRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGNFAK 695
AP+GTGIV++ +L ++G++DC+T G T + N K
Sbjct: 204 APKGTGIVASKFQLNVLKISGIRDCFTKSFGRTKSSFNTIK 244
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 122 bits (294), Expect = 8e-27
Identities = 65/126 (51%), Positives = 78/126 (61%)
Frame = +3
Query: 318 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 497
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLGE---------T 51
Query: 498 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGT 677
++ + V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY S R T T
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTAT 111
Query: 678 LGNFAK 695
L NF+K
Sbjct: 112 LYNFSK 117
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 122 bits (294), Expect = 8e-27
Identities = 88/179 (49%), Positives = 106/179 (59%), Gaps = 1/179 (0%)
Frame = +3
Query: 162 VPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 341
+PVTKLG LV+ KI L P+KEFEI DFFL SL D+VLKI+P+ + R Q
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQ 51
Query: 342 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGKPHT 518
TRF +F I + GH G+GVKCSK+V TA+ + + L S LP R Y GN I KP T
Sbjct: 52 WTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSCLP--RDYCGNNIRKP-T 107
Query: 519 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGNFAK 695
PCK TG S++ L P IVS VP KL+ A + CYTS R T TLGN AK
Sbjct: 108 YPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASIDSCYTSARSYTVTLGNIAK 162
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 122 bits (293), Expect = 1e-26
Identities = 73/191 (38%), Positives = 105/191 (54%), Gaps = 15/191 (7%)
Frame = +3
Query: 159 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPV------- 317
W P TKLGRLV+ GKI ++ I I+E EI+D L P+L E +K +
Sbjct: 7 WQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFRSK 65
Query: 318 ------QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVR 479
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V
Sbjct: 66 KPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVA 125
Query: 480 RGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYT 653
RG W G PH++P +V GK GSV V L PAP+G GIV+ K+ +AG++D +
Sbjct: 126 RGCGSWECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWV 185
Query: 654 SXRGSTGTLGN 686
G T T N
Sbjct: 186 RSFGKTKTKMN 196
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 121 bits (291), Expect = 2e-26
Identities = 58/96 (60%), Positives = 76/96 (79%)
Frame = +3
Query: 150 QKXWVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 329
++ WVP+TKLGRLV+ GKI LE I+ FS+PIKE++I+D FL +L +E L I PVQKQT
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQT 119
Query: 330 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 437
AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+
Sbjct: 120 CAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
Score = 41.9 bits (94), Expect = 0.014
Identities = 22/61 (36%), Positives = 26/61 (42%)
Frame = +2
Query: 470 TSSKRLLG*QDRKATHRPLQGHRQVWFCNSPADSCPSWYWNCVCXXXXXXXXXGWCTGLL 649
+S KR+LG QDR TH P+Q R+ S S YW GW LL
Sbjct: 169 SSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLL 228
Query: 650 H 652
H
Sbjct: 229 H 229
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 118 bits (285), Expect = 1e-25
Identities = 58/72 (80%), Positives = 60/72 (83%)
Frame = +3
Query: 141 KEAQKXWVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 320
K K W+PVTKLGRLV+ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 321 KQTRAGQRTRFK 356
KQTRAGQRTRFK
Sbjct: 114 KQTRAGQRTRFK 125
Score = 103 bits (246), Expect = 6e-21
Identities = 47/56 (83%), Positives = 49/56 (87%)
Frame = +3
Query: 528 KVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGNFAK 695
KVTG+CGSV VRLIPAPRGTGIVSAPVP KLL MAG+ DCYTS RG T TLGNFAK
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 180
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 112 bits (269), Expect = 9e-24
Identities = 64/176 (36%), Positives = 104/176 (59%)
Frame = -1
Query: 686 ISQGAS*TTX*GVAVLYTSHXKKLXRNWRRHNSSTTRGRNQPDCYRTTLAGDLARDGVWL 507
+ Q + T+ GV + TS +L +W ++ T+ NQ + TTL L GV L
Sbjct: 48 VFQSSGGTSRRGVDIFNTSQLHQLLDSWGGDDTGTSWSWNQSNGNGTTLTRGLGSQGVRL 107
Query: 506 SDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTC 327
+ + TPVTSS+W N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ +
Sbjct: 108 TQVGTPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSG 167
Query: 326 LFLYRHDL*NLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFSXANKTAEFGDRNP 159
L L R D+ N I+Q ++ +NDLEF DW R Q + + D + +++ + G+ NP
Sbjct: 168 LLLDRLDVHNFILQ-VWQQLVNDLEFLDWQRVQEDFFDGRDLAGLHQSTQLGNWNP 222
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 110 bits (264), Expect = 4e-23
Identities = 76/167 (45%), Positives = 90/167 (53%), Gaps = 1/167 (0%)
Frame = +3
Query: 141 KEAQKXWVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 320
K K WV + LG LV+ KI LE FS +II+FFLG L DEVL+ M Q
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ 72
Query: 321 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 500
Q RTR K F + + L V CSKEV TA + AI L + + GY GNK
Sbjct: 73 NQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNK 125
Query: 501 IGKPHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGV 638
IG PHT+PC VT + V V L APRGTG VSA VP KL +A +
Sbjct: 126 IGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 107 bits (258), Expect = 2e-22
Identities = 53/65 (81%), Positives = 56/65 (86%)
Frame = +3
Query: 201 KIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 380
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 381 NGHIG 395
NG+ G
Sbjct: 62 NGYAG 66
Score = 57.2 bits (132), Expect = 4e-07
Identities = 33/104 (31%), Positives = 45/104 (43%)
Frame = +2
Query: 374 RQQRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLG*QDRKATHRPLQGHRQVWFC 553
R Y EV QG H R ++P + ++RLLG QDR+A HRPLQG R + C
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRPLQGDRPLRLC 118
Query: 554 NSPADSCPSWYWNCVCXXXXXXXXXGWCTGLLHLXSWFNWHLGK 685
+W+ + W LLHL + H G+
Sbjct: 119 AGALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHLSQGLHCHPGQ 162
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 107 bits (257), Expect = 3e-22
Identities = 58/131 (44%), Positives = 84/131 (64%)
Frame = -1
Query: 533 DLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCL 354
+LA GV +DLVTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ L
Sbjct: 18 NLAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGL 77
Query: 353 ETCALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFSXANKTAEF 174
E L+GT L L HDL + ++Q A+EEI+DLE F+ R QV+ L+ D + A++ +
Sbjct: 78 EARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQRVQVDLLQGADLAIAHQATQL 137
Query: 173 GDRNPXFLGFL 141
G NP FL
Sbjct: 138 GHWNPFLRVFL 148
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 104 bits (250), Expect = 2e-21
Identities = 52/72 (72%), Positives = 55/72 (76%)
Frame = +3
Query: 141 KEAQKXWVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 320
K K W+P TKLG LV+ KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQ
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQ 113
Query: 321 KQTRAGQRTRFK 356
KQTRAGQ TRFK
Sbjct: 114 KQTRAGQWTRFK 125
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/56 (76%), Positives = 45/56 (80%)
Frame = +3
Query: 528 KVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGNFAK 695
KVTG+CGSV VRL APRGTGIVSAPVP KLL MA + DCYT RG T TLGNFAK
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAK 179
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 100 bits (240), Expect = 3e-20
Identities = 48/68 (70%), Positives = 51/68 (75%)
Frame = +3
Query: 492 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGST 671
GNKIGK H V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYTS RG T
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYTSARGCT 66
Query: 672 GTLGNFAK 695
+L FA+
Sbjct: 67 ASLDYFAQ 74
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 87.4 bits (207), Expect = 3e-16
Identities = 46/93 (49%), Positives = 63/93 (67%)
Frame = +3
Query: 189 VRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVA 368
V+ K+ L+ +YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 369 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 467
I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 191 IRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 83.4 bits (197), Expect = 5e-15
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = +3
Query: 165 PVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 344
PVTKLGRLV+ GK+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKE 94
Query: 345 TRFKAFVAIGDNNGHIGL 398
R KA VAIGD+NGH L
Sbjct: 95 PRLKASVAIGDHNGHRAL 112
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 81.4 bits (192), Expect = 2e-14
Identities = 46/133 (34%), Positives = 72/133 (54%)
Frame = +3
Query: 282 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 461
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 462 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQ 641
+++ V++ K ++ V G+ G+ V L+PAP GTGI++ ++ +AG
Sbjct: 108 NLIKVKQ-------TKKGSIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFT 160
Query: 642 DCYTSXRGSTGTL 680
D YT RG+ +
Sbjct: 161 DIYTKSRGANAPM 173
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 80.6 bits (190), Expect = 3e-14
Identities = 43/126 (34%), Positives = 69/126 (54%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 471 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCY 650
+ K +T+P ++ GK G+ T+ + PA GTG+++ ++L + GV D
Sbjct: 71 KISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDIL 122
Query: 651 TSXRGS 668
T +GS
Sbjct: 123 TKIKGS 128
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/42 (83%), Positives = 36/42 (85%)
Frame = +3
Query: 570 PAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGNFAK 695
PAPRGTGIVSAPVP KLL MAG+ DCYTS RG T TLGNFAK
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK 42
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 78.2 bits (184), Expect = 2e-13
Identities = 44/137 (32%), Positives = 73/137 (53%)
Frame = +3
Query: 276 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 455
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 456 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAG 635
K + + V I K +++P ++ + G+ +V + PA GTG+V+ +L +AG
Sbjct: 128 KKTAITV-------PITKDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAG 180
Query: 636 VQDCYTSXRGSTGTLGN 686
Q+ G+ L N
Sbjct: 181 YQNARGKQLGTDNALNN 197
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 77.4 bits (182), Expect = 3e-13
Identities = 46/128 (35%), Positives = 70/128 (54%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 464
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 465 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQD 644
++ V +G T+P ++ G+ GS V + PA GTG++S +L +AGV D
Sbjct: 72 LISV------PIVGT--TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGD 123
Query: 645 CYTSXRGS 668
T GS
Sbjct: 124 ILTKSLGS 131
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 74.9 bits (176), Expect = 2e-12
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +3
Query: 201 KIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 380
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 381 NGHIGLGVKCSKEVATAIRGAIIL 452
N ++ LGV+ KE+ A+ IIL
Sbjct: 61 NDNVSLGVERPKELLIAVCRTIIL 84
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 74.9 bits (176), Expect = 2e-12
Identities = 43/132 (32%), Positives = 71/132 (53%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 464
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 465 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQD 644
+ V K+ K T+ +V GK G+ V + PAP+GTG+++ +L + G +D
Sbjct: 138 MYKV-------KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKD 190
Query: 645 CYTSXRGSTGTL 680
Y+ G +L
Sbjct: 191 VYSKNLGKNTSL 202
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 72.5 bits (170), Expect = 9e-12
Identities = 44/128 (34%), Positives = 67/128 (52%)
Frame = +3
Query: 288 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 467
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 468 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDC 647
+ + K HT+P +V GK S V L P+ GTGI++ ++ AG+QD
Sbjct: 91 VKINF--------KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDV 142
Query: 648 YTSXRGST 671
T GS+
Sbjct: 143 LTKSWGSS 150
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 71.7 bits (168), Expect = 2e-11
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV- 467
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK ++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 468 -LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQD 644
+PV G T+P +V G+ + V L PA GTGI++ ++ +AG+Q+
Sbjct: 77 EVPVING----------TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQN 126
Query: 645 CYTSXRGSTGTL 680
T GST L
Sbjct: 127 ILTKSLGSTNPL 138
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 71.3 bits (167), Expect = 2e-11
Identities = 40/132 (30%), Positives = 70/132 (53%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 471 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCY 650
V + K T P + G G+ V L PA GTG+++ +L MAGV++
Sbjct: 209 QV-------PMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENAL 261
Query: 651 TSXRGSTGTLGN 686
GS L N
Sbjct: 262 GKQLGSNNALNN 273
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 70.1 bits (164), Expect = 5e-11
Identities = 41/141 (29%), Positives = 72/141 (51%)
Frame = +3
Query: 264 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 443
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 444 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLL 623
++ AK SV+ V + T+P +V K + ++PA GTG+++ +L
Sbjct: 566 LVDAKKSVVRV-------PLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVL 618
Query: 624 XMAGVQDCYTSXRGSTGTLGN 686
+AGVQ+ G L N
Sbjct: 619 ELAGVQNVLAKRIGCRSLLNN 639
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 69.7 bits (163), Expect = 6e-11
Identities = 36/132 (27%), Positives = 71/132 (53%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 471 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCY 650
V + K +++P ++G G+ V L PA GTG+++ +L +AG+++
Sbjct: 128 RV-------PLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNVL 180
Query: 651 TSXRGSTGTLGN 686
GS L N
Sbjct: 181 AKSLGSKSPLNN 192
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 68.9 bits (161), Expect = 1e-10
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 471 --PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQD 644
PV G T+P ++ G+ + V L PA GTG+++ VP + +AG+ +
Sbjct: 79 TVPVENG----------TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITN 128
Query: 645 CYTSXRGS 668
+ GS
Sbjct: 129 MLSKELGS 136
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 68.1 bits (159), Expect = 2e-10
Identities = 64/186 (34%), Positives = 83/186 (44%), Gaps = 7/186 (3%)
Frame = +3
Query: 159 WVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 338
W+ +T L L + KI E + LF P K I F G SL D+++ + + +
Sbjct: 34 WLQITTLYGLFKNMKIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSS 93
Query: 339 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGK-- 509
QRT+ GH GL CS EVATAI+ I + L S P+ R GN GK
Sbjct: 94 QRTK-----------GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSL 140
Query: 510 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK----LLXMAGVQDCYTSXRGSTGT 677
P P ++ S+ LI AP T I+S VP LL +A D S G T
Sbjct: 141 PSVCPMQIRDYHSSMLACLITAP-STCIISGLVPKNLLLLLLLLASTDDRCISASGCTDA 199
Query: 678 LGNFAK 695
LG AK
Sbjct: 200 LGRLAK 205
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 68.1 bits (159), Expect = 2e-10
Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Frame = +3
Query: 279 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 458
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 459 LSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK-LLXMAG 635
+ VR G T+P G+ G+ L PA +GTGIV+ + +L + G
Sbjct: 73 KQL--VRIPITGT------TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVG 124
Query: 636 VQDCYTSXRGS 668
+ D T GS
Sbjct: 125 INDVLTKTFGS 135
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 68.1 bits (159), Expect = 2e-10
Identities = 42/132 (31%), Positives = 66/132 (50%)
Frame = +3
Query: 270 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 449
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 450 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXM 629
AK +++ V + TVP +V G G+ V + PA GTG+++ ++ +
Sbjct: 98 EAKKNLIRVPL--------RGTTVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIEL 149
Query: 630 AGVQDCYTSXRG 665
AG+ D Y G
Sbjct: 150 AGIADVYAKSLG 161
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 67.3 bits (157), Expect = 3e-10
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA--KLS 464
+ ++K+ + K T+ G+ RF V +G+ G IG G+ + EV AI+ AI A L
Sbjct: 68 ERIVKLKRISKTTKGGRNMRFSVLVVVGNRKGKIGYGIAKALEVPNAIKKAIKAAHNSLH 127
Query: 465 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQD 644
+ + +G ++ +V G+ G+ V L PAP+GTGI++ ++ +AG D
Sbjct: 128 TIEIHKG----------SIYHEVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSD 177
Query: 645 CYTSXRG 665
YT G
Sbjct: 178 IYTKNLG 184
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 66.5 bits (155), Expect = 6e-10
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 2/131 (1%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 464
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 465 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGV 638
V+ P+ G TVP V G G+ + ++PA RGTG+V+ + +AG
Sbjct: 88 VIRVPIVDG----------TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGY 137
Query: 639 QDCYTSXRGST 671
D T GST
Sbjct: 138 TDVLTKIIGST 148
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 65.7 bits (153), Expect = 1e-09
Identities = 39/132 (29%), Positives = 67/132 (50%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 471 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCY 650
V + K T P + G G+ V L PA GTG+++ +L MAGV++
Sbjct: 246 TV-------PMTKYLTFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENAL 298
Query: 651 TSXRGSTGTLGN 686
S L N
Sbjct: 299 GKQIRSKNALNN 310
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 65.3 bits (152), Expect = 1e-09
Identities = 37/132 (28%), Positives = 69/132 (52%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A + +++
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKAKTDGRKNLI 87
Query: 471 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCY 650
V I K ++P V G G+ + + P+ G+G+++ +L +AG+++
Sbjct: 88 DV-------PITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVI 140
Query: 651 TSXRGSTGTLGN 686
GS L N
Sbjct: 141 AKQLGSDNLLNN 152
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 60.5 bits (140), Expect = 4e-08
Identities = 43/131 (32%), Positives = 60/131 (45%)
Frame = +3
Query: 276 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 455
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 456 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAG 635
K + V R T+ V G + TV L PA GTG+++ ++ AG
Sbjct: 102 KKHMFSVPR--------VRGTITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAG 153
Query: 636 VQDCYTSXRGS 668
+ D T GS
Sbjct: 154 ITDVLTKSMGS 164
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 60.1 bits (139), Expect = 5e-08
Identities = 35/132 (26%), Positives = 64/132 (48%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 471 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCY 650
V + K +++ G G V + PA GTG+++ +L +AGV++
Sbjct: 79 EV-------PLTKSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNIL 131
Query: 651 TSXRGSTGTLGN 686
GS L N
Sbjct: 132 AKQLGSNNPLNN 143
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 60.1 bits (139), Expect = 5e-08
Identities = 43/130 (33%), Positives = 60/130 (46%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 471 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCY 650
V IG T P V G+ + V L PA GTG+++ +L AGV D
Sbjct: 104 RV------PLIGGTITHP--VQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDIL 155
Query: 651 TSXRGSTGTL 680
GS +
Sbjct: 156 AKSLGSDNAI 165
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 58.0 bits (134), Expect = 2e-07
Identities = 39/126 (30%), Positives = 63/126 (50%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 471 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCY 650
V I TVP + K + V L PAP+G GI+++ ++ +AG D Y
Sbjct: 151 RV-------PIINKSTVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIY 203
Query: 651 TSXRGS 668
T GS
Sbjct: 204 TKSYGS 209
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 57.2 bits (132), Expect = 4e-07
Identities = 40/136 (29%), Positives = 63/136 (46%)
Frame = +3
Query: 288 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 467
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR A+ ++
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNL 75
Query: 468 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDC 647
+ V T+P +V K G V L PA GTG+++ +L +AGV+D
Sbjct: 76 VTVPM--------HGQTLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDV 127
Query: 648 YTSXRGSTGTLGNFAK 695
G++ N AK
Sbjct: 128 LAKSLGASNA-ANVAK 142
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 57.2 bits (132), Expect = 4e-07
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Frame = +3
Query: 276 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 455
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 456 KLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXM 629
K +++ P+R G + G+ G+ G+ V L AP GTGI++ +
Sbjct: 116 KKTMIRVPLREGRTLHHDGR---------GRFGAGLVYLRSAPSGTGIIAGGPMRAIFES 166
Query: 630 AGVQDCYTSXRGST 671
GV D T G++
Sbjct: 167 LGVADVVTKSVGTS 180
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 56.8 bits (131), Expect = 5e-07
Identities = 40/128 (31%), Positives = 62/128 (48%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 464
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERARKD 75
Query: 465 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQD 644
+ V + PH +V G G+ V L PA GTG+++ +L AGV +
Sbjct: 76 MALVSL----TDVSIPH----QVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSN 127
Query: 645 CYTSXRGS 668
T GS
Sbjct: 128 ILTKCLGS 135
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 56.4 bits (130), Expect = 6e-07
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 464
L D ++ I V K T+ G+ F A V +G+ +G IG G+ + EV AI + AK +
Sbjct: 16 LKDRLVAINRVTKVTKGGRTFTFAAIVVVGNEDGVIGWGLGKAGEVPAAIAKGVEAAKKN 75
Query: 465 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGV 638
++ PV G T+P + G +V L PA GTG+ + +L GV
Sbjct: 76 LIRVPVHNG----------TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGV 125
Query: 639 QDCYTSXRGST 671
D +GS+
Sbjct: 126 TDVLAKSKGSS 136
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +3
Query: 147 AQKXWVPVTKLGRLVRXGKIDKLEXIYLFSLPIKEFEIIDFF 272
A W PVTKLGRLV+ GK+ ++ I+ F + IKEFEI+D F
Sbjct: 31 ASDGWTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 55.6 bits (128), Expect = 1e-06
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Frame = +3
Query: 273 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 452
L L D V+KI + G+R F A V +G+ +G +G G + EV +++ A
Sbjct: 17 LEAGLLDRVVKIKRCAAVVKGGRRFSFAAMVVVGNGSGQVGWGYGKANEVPPSVQKAQKQ 76
Query: 453 AKLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLX 626
A S++ P+ G ++P +V G+ G+ V LIPA GTGI++ +
Sbjct: 77 ASRSMIHVPLVEG----------SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCE 126
Query: 627 MAGVQDCYTSXRGS 668
G+ D T G+
Sbjct: 127 ACGIHDILTKSYGT 140
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 55.2 bits (127), Expect = 1e-06
Identities = 39/128 (30%), Positives = 60/128 (46%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 464
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+ A+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIKKGTENARKR 130
Query: 465 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQD 644
++ V K T+P +V G V L PA GTG+++ +L AGV++
Sbjct: 131 MVSVTL--------KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKN 182
Query: 645 CYTSXRGS 668
T GS
Sbjct: 183 VLTKSMGS 190
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 54.4 bits (125), Expect = 3e-06
Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 464
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 465 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQD 644
+P+R G T+ V G+ G+ V L A GTGI++ + GV D
Sbjct: 84 FVPLRGG---------RTLHHDVHGRHGAGKVLLRSAKPGTGIIAGGPMRAVFETLGVHD 134
Query: 645 CYTSXRGST 671
GS+
Sbjct: 135 VVAKSTGSS 143
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/36 (69%), Positives = 27/36 (75%)
Frame = +3
Query: 141 KEAQKXWVPVTKLGRLVRXGKIDKLEXIYLFSLPIK 248
K K W+PVTKLGRLV+ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 52.8 bits (121), Expect = 8e-06
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Frame = +3
Query: 297 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 476
V+ + K T+ G T F A V +G+ +G IG +V AI A A S+ V
Sbjct: 4 VIDVNRTTKVTKGGDLTNFTAMVVVGNGDGVIGFATGKGADVGMAIDKAYRKAARSLTYV 63
Query: 477 RRGYWGNKIGKPHTVPCKVTGK-CGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYT 653
+R + HT+ +V GK C ++ V ++PAP G GIV+ + +AG+++
Sbjct: 64 QRF-------EDHTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKNIKA 115
Query: 654 SXRGS 668
GS
Sbjct: 116 KIHGS 120
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 52.8 bits (121), Expect = 8e-06
Identities = 28/99 (28%), Positives = 46/99 (46%)
Frame = +3
Query: 351 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 530
F+ + IG+ NG IG G K+ TA+R A + A+ +++P+ W HT P
Sbjct: 187 FRQLIFIGNGNGVIGYGKGKGKDFETALRRAKVDAQRNLVPISLDLW-------HTCPIP 239
Query: 531 VTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDC 647
+TG+ + + P P G P +L + G+ C
Sbjct: 240 LTGRFNDAEIEINPRPLGFNAYGNPQIASMLMLTGIHHC 278
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 52.4 bits (120), Expect = 1e-05
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 464
L + V+ I V K T+ G++ F+ +GD G +G EV A A+ AK +
Sbjct: 11 LFESVVDIARVSKVTKGGRQFSFRVAALVGDKKGCVGYATAKHDEVLDARSKAVRKAKGA 70
Query: 465 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGV 638
++ P+R G T+ K G+ + + PAP GTGIV+ K M GV
Sbjct: 71 MIRFPLREG---------RTIHHDCFSKLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGV 121
Query: 639 QDCYTSXRGST 671
D GS+
Sbjct: 122 SDIIAKSYGSS 132
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 52.4 bits (120), Expect = 1e-05
Identities = 38/132 (28%), Positives = 61/132 (46%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 464
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 465 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQD 644
++ + G+ I PH V G + L PA GTGIV+ +L MAGV++
Sbjct: 73 LITI-ESLEGDSI--PHEVLVDQDG----AQLLLKPAKPGTGIVAGSRIRLILEMAGVKN 125
Query: 645 CYTSXRGSTGTL 680
GS +
Sbjct: 126 IVAKSLGSNNPM 137
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/63 (46%), Positives = 37/63 (58%)
Frame = -2
Query: 646 QSCTPAX*RSXLGTGADTIPVPRGAGISRTVTEPHLPVTLQGTVCGFPILLPQ*PLRTGK 467
QS P+ LGT A+ +PVP GAG+ T TEP P+TL G +CG LLP P+ +
Sbjct: 26 QSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCGACCLLP--PVASTH 82
Query: 466 TDN 458
DN
Sbjct: 83 RDN 85
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 51.2 bits (117), Expect = 2e-05
Identities = 36/129 (27%), Positives = 62/129 (48%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 464
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 465 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQD 644
++ V N I T+ V G+ G+ V + PA GTGI++ + + GV +
Sbjct: 81 MVRV------NLIN--GTLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHN 132
Query: 645 CYTSXRGST 671
GST
Sbjct: 133 ILAKCLGST 141
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 50.4 bits (115), Expect = 4e-05
Identities = 29/52 (55%), Positives = 33/52 (63%)
Frame = -2
Query: 307 IFRTSSFRDGPRKKSMISNSLIGKENK*MXSSLSIFPXRTRRPSLVTGTHXF 152
+F TSS + G K SMI NSL GKE K + S + I P T PSLVTGTH F
Sbjct: 1 MFMTSSCKPG-NKVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPF 51
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 50.4 bits (115), Expect = 4e-05
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
Frame = +3
Query: 291 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 464
++++ I + K + G+R F A V +G+ G IG+ +K+V AI+ A A+ L
Sbjct: 13 EKLVHINRITKVVKGGRRFGFSALVVVGNQAGKIGVAHAKAKQVPDAIKKANETARRVLI 72
Query: 465 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQD 644
+P+R G T+ V GK G+ + L AP+GTGI++ + + G++D
Sbjct: 73 HVPLREG---------RTIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKD 123
Query: 645 CYTSXRGST 671
G++
Sbjct: 124 IVAKSMGTS 132
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +3
Query: 582 GTGIVSAPVPXKLLXMAGVQDCYTSXRGSTGTLGNFAK 695
G+ +V+ VP K+L AG++D +TS RGST TL NF K
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNFVK 39
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 46.4 bits (105), Expect = 7e-04
Identities = 34/125 (27%), Positives = 56/125 (44%)
Frame = +3
Query: 297 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 476
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
Query: 477 RRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTS 656
+ + T+ + K S V L A GTGI++ + + GVQD
Sbjct: 80 H-------LRESRTLHHDIQAKFCSSKVMLRSAKVGTGIIAGGSIRLIFEVLGVQDVVAK 132
Query: 657 XRGST 671
GS+
Sbjct: 133 SIGSS 137
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 46.0 bits (104), Expect = 9e-04
Identities = 36/121 (29%), Positives = 57/121 (47%)
Frame = +3
Query: 282 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 461
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 462 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQ 641
++ PV R Y + T+ V GK G+V ++L+ P G G+ + ++ AG+
Sbjct: 314 NMQPVPR-Y------EKRTIFGDVEGKVGAVQLKLMHRPPGFGLRCQHLIFEMCRAAGIH 366
Query: 642 D 644
D
Sbjct: 367 D 367
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 45.6 bits (103), Expect = 0.001
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +3
Query: 315 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 491
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR +
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR--Y 406
Query: 492 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQD 644
N+ T+ VT K V L+ P G G+ ++ AG+ D
Sbjct: 407 ENR-----TIYGNVTSKISGTVVELMARPPGFGLRCPHRIFEMCRAAGIHD 452
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 44.4 bits (100), Expect = 0.003
Identities = 34/124 (27%), Positives = 58/124 (46%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 464
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 465 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQD 644
++P+RR Y + T+ KV K V + P G G+ + ++ +AG++D
Sbjct: 310 MVPIRR-Y------EDRTIYGKVKVKIAGTVVEMAARPPGFGLRISHRLFEICRLAGIKD 362
Query: 645 CYTS 656
S
Sbjct: 363 LSAS 366
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 44.0 bits (99), Expect = 0.004
Identities = 33/110 (30%), Positives = 54/110 (49%)
Frame = +3
Query: 315 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 494
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R +
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR--YE 380
Query: 495 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQD 644
N+ T+ +VT K VRL P G G+ + ++ AG++D
Sbjct: 381 NR-----TIYGEVTTKVSGTIVRLNSRPPGFGLRVSHRIFEMCRAAGIRD 425
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 43.6 bits (98), Expect = 0.005
Identities = 34/121 (28%), Positives = 57/121 (47%)
Frame = +3
Query: 282 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 461
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 462 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQ 641
++ P+RR Y + T+ VT K V++ P G G+ + ++ AG+Q
Sbjct: 302 NMRPIRR-Y------EDRTIYGSVTAKVSGTVVKMNARPPGFGLRVSHRIFEMCRAAGIQ 354
Query: 642 D 644
D
Sbjct: 355 D 355
>UniRef50_Q6CAL1 Cluster: Similar to sp|P33759 Saccharomyces
cerevisiae YBR251w MRPS5 ribosomal protein S5; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P33759
Saccharomyces cerevisiae YBR251w MRPS5 ribosomal protein
S5 - Yarrowia lipolytica (Candida lipolytica)
Length = 312
Score = 43.2 bits (97), Expect = 0.006
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Frame = +3
Query: 288 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAIRGAIILAKLS 464
N +L V+ QT G++ +F VA GD G +GLG K A+ A+ A S
Sbjct: 148 NTRLLLNRIVKSQTGKGKKMQFCVLVATGDGKGMLGLGEGKDPLSFPVALEKAMWKATRS 207
Query: 465 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQD 644
+ V R + N+ T+ +V K +V + + AP G G+ P+ ++ M G+ D
Sbjct: 208 MKMVPR--YQNR-----TIYGEVYKKFHAVHLTMRSAPAGHGLRVNPIVSQMCSMVGITD 260
Query: 645 CYTSXRGSTGTLGNFAK 695
+ GS L N AK
Sbjct: 261 MTCNVYGSRNPL-NVAK 276
>UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 375
Score = 39.9 bits (89), Expect = 0.058
Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 2/132 (1%)
Frame = +3
Query: 282 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA-- 455
+L+ + + V T G+ A V G+ G +G G + A R A A
Sbjct: 189 NLHRHAIVLKRVVHMTTKGKDASMYALVIAGNGKGLVGYGEGKDTNASKAGRKAFNAAVK 248
Query: 456 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAG 635
L + + +G G++ TV ++ K G+ V L P P G G+ PV + G
Sbjct: 249 NLDSVAIHKGSDGSR-----TVETQLEAKWGASRVVLRPRPAGFGLRVPPVIHAICRSVG 303
Query: 636 VQDCYTSXRGST 671
+ D S GST
Sbjct: 304 ITDLSASIYGST 315
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.41
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 446 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 348
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 411
Score = 36.3 bits (80), Expect = 0.72
Identities = 31/120 (25%), Positives = 50/120 (41%)
Frame = +3
Query: 285 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 464
L+ ++L V QTR G+ G+ G +G+G +E A I A +
Sbjct: 248 LDTKILVSHRVVNQTRLGKIDSMYVLAIAGNGRGRLGIGEAKGQEPEDTNNNAKIAAIKN 307
Query: 465 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQD 644
+ PV R Y + T+ V GK +V V+L+ P G G+ + + G+ D
Sbjct: 308 MQPVPR-Y------EERTIYGDVEGKVSAVEVKLMARPPGFGLRCQKLIFDMAKAVGIHD 360
>UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_52826_53383 - Giardia lamblia
ATCC 50803
Length = 185
Score = 35.5 bits (78), Expect = 1.3
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -1
Query: 386 TVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQ-GRAEEEINDLEFFDW*RKQVNALEF 210
+V V + + E L G L L RHD+ +L+ + +E +NDL D R N ++
Sbjct: 44 SVTVPDYHMSTEPRTLPGCGLLLDRHDIAHLLRKLALRKEVVNDLCLLDGERILENVIKG 103
Query: 209 VDFSXANKTAEFGDRNPXFL 150
+ S ++ AEF R P FL
Sbjct: 104 LYLSCLHQAAEFRGRMPLFL 123
>UniRef50_UPI00015B5E49 Cluster: PREDICTED: similar to 28S ribosomal
protein S5; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to 28S ribosomal protein S5 - Nasonia
vitripennis
Length = 405
Score = 35.1 bits (77), Expect = 1.7
Identities = 29/111 (26%), Positives = 48/111 (43%)
Frame = +3
Query: 336 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 515
G++ + +FV G+ NG G+ + S E TA+R A A ++ V + K H
Sbjct: 162 GRKRSYSSFVITGNKNGLCGIALGKSAEGRTALRLARNRAGFKLMHV-------PLYKNH 214
Query: 516 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXKLLXMAGVQDCYTSXRGS 668
TV + GS + + P G G+V + G++D + GS
Sbjct: 215 TVFHDFFTQFGSTKLFVTKKPEGYGLVCHRAIKCACEVIGIKDLHVKVEGS 265
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.2
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +3
Query: 273 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 452
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 453 AKLSVL 470
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.2
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 270 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 434
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxin
domain containing 3 (spermatozoa),; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to thioredoxin domain
containing 3 (spermatozoa), - Monodelphis domestica
Length = 559
Score = 33.1 bits (72), Expect = 6.7
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 207 DKLEXIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ--RTRFKAFVAIGDN 380
DK E ++LFSL K ++ P LN +VL+++ +++ AG+ R + + I
Sbjct: 81 DKCEPVFLFSLNGKIVSMVKGANAPLLNSKVLQLIEDERKVLAGEIPRRSDEYNILIIKP 140
Query: 381 NGHIGLGVKCSKEVATAIRGAIILAKLSVL 470
NG V K++ T GA I+A++ +L
Sbjct: 141 NGVEEEKVDTIKQLITGF-GAEIVAEMQLL 169
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 6.7
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 354 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 506
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 33.1 bits (72), Expect = 6.7
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = -1
Query: 332 TCLFLYR-HDL*NLIIQGRAEEEIND-LEFFDW*RKQVNALEFVDFSXANKT 183
TCLF R HDL +LI++G ++EEI D + + ++Q + + DF A++T
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIADRIRYAVENKEQRHHIGEADFMPASRT 332
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 6.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 297 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 443
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q2JDT3 Cluster: Exodeoxyribonuclease III; n=30;
Bacteria|Rep: Exodeoxyribonuclease III - Frankia sp.
(strain CcI3)
Length = 304
Score = 32.7 bits (71), Expect = 8.8
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +3
Query: 438 GAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 617
G IL++ ++ V RG G+ G P P + CG + + + P G I K
Sbjct: 74 GVAILSRDTLDDVARGLPGDP-GFPGPEPRAIAATCGGIRIWSLYVPNGRTIDDPHYAYK 132
Query: 618 LLXMAGVQD--CYTSXRGSTGTLGNF 689
L +A +++ + +G+ TLG+F
Sbjct: 133 LAWLAALREVVAEATTQGAVMTLGDF 158
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,996,388
Number of Sequences: 1657284
Number of extensions: 12971171
Number of successful extensions: 34284
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 32879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34197
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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