Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_F14
(739 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47181| Best HMM Match : Pkinase (HMM E-Value=7.7e-31) 40 0.002
SB_12462| Best HMM Match : Kinesin (HMM E-Value=0) 36 0.034
SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0) 36 0.045
SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15) 36 0.045
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_39187| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08) 34 0.14
SB_51703| Best HMM Match : LRR_1 (HMM E-Value=1.9e-06) 33 0.18
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 33 0.18
SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_35523| Best HMM Match : RVT_1 (HMM E-Value=0) 33 0.24
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 33 0.24
SB_26361| Best HMM Match : fn3 (HMM E-Value=0) 33 0.32
SB_56912| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 33 0.32
SB_29898| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.0085) 33 0.32
SB_32573| Best HMM Match : His_leader (HMM E-Value=0.0014) 32 0.56
SB_11869| Best HMM Match : Excalibur (HMM E-Value=8) 31 0.74
SB_15757| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_3098| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_52178| Best HMM Match : Drf_FH1 (HMM E-Value=2.2) 31 0.97
SB_50934| Best HMM Match : HSP90 (HMM E-Value=0) 31 0.97
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 31 0.97
SB_30368| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045) 31 0.97
SB_344| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_52574| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_47910| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) 30 1.7
SB_5548| Best HMM Match : PT (HMM E-Value=3.1) 30 1.7
SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5) 30 2.3
SB_52084| Best HMM Match : Vicilin_N (HMM E-Value=1.7) 30 2.3
SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10) 30 2.3
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 30 2.3
SB_14943| Best HMM Match : CRAL_TRIO (HMM E-Value=8e-05) 30 2.3
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 30 2.3
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_58461| Best HMM Match : WH2 (HMM E-Value=0.63) 29 3.0
SB_35171| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_30986| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 3.9
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7) 29 3.9
SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5) 29 3.9
SB_17045| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11) 29 5.2
SB_32475| Best HMM Match : IWS1_C (HMM E-Value=0) 29 5.2
SB_22293| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 5.2
SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5) 29 5.2
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 29 5.2
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 29 5.2
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 28 6.9
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3) 28 6.9
SB_49029| Best HMM Match : Collagen (HMM E-Value=6.7) 28 6.9
SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.9
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_24428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_9702| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 28 9.1
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0) 28 9.1
SB_15164| Best HMM Match : Sas10_Utp3 (HMM E-Value=5.3) 28 9.1
SB_7850| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_55276| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_36952| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 28 9.1
SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 9.1
SB_7099| Best HMM Match : Secretin_N_2 (HMM E-Value=4.6) 28 9.1
>SB_47181| Best HMM Match : Pkinase (HMM E-Value=7.7e-31)
Length = 801
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 185 EPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENG--DATEKKE 358
E SPV+ A+ VE S K+N E E+ P GDA E D + G +++
Sbjct: 151 EETGSPVEHEVAENVEDDSSQTKKNNETELQEEEPPSVGDAMECKDKEKKGRKKLQPRQK 210
Query: 359 TGVKRKSV 382
GVK+++V
Sbjct: 211 IGVKKRNV 218
>SB_12462| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 803
Score = 35.9 bits (79), Expect = 0.034
Identities = 21/77 (27%), Positives = 33/77 (42%)
Frame = +2
Query: 146 DKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 325
D++ VA + V+S P+A A S G NG+ EAPE+ + E+ D
Sbjct: 459 DEEGVAAQGVSSVTPEAGSALSVIALEERGRSSTGSPNGSLEAPEELQEKMVGGEKKGDT 518
Query: 326 SENGDATEKKETGVKRK 376
++K + RK
Sbjct: 519 KLKEKRKQRKAYAMSRK 535
>SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0)
Length = 1596
Score = 35.5 bits (78), Expect = 0.045
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 364
EA+E+ ++ E G A E+ +ASE G+A+E ETG
Sbjct: 19 EASETGEASEASEAGEASETGEAGKASEAGEASETGEASEASETG 63
Score = 32.7 bits (71), Expect = 0.32
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Frame = +2
Query: 140 AVDKQXVAPEXVTSTEPKASPV-KXSPAKXVEAAESNGKENGTDEAPE-----DSPAENG 301
AVD + T +AS + S A G+ + T EA E ++ E G
Sbjct: 11 AVDSGVASEASETGEASEASEAGEASETGEAGKASEAGEASETGEASEASETGEATGEAG 70
Query: 302 DAEESNDASENGDATEKKETGVKRKS 379
+A E+ +ASE +A E ETG K+
Sbjct: 71 EASETGEASEASEAGEASETGEAGKA 96
Score = 32.7 bits (71), Expect = 0.32
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 122 ATMAAAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAEN- 298
A+ A A + + S +AS ++ EA+++ GK + EA E A
Sbjct: 203 ASEAGEASEAGKASEASEASETGEASEATGEASEAGEASKA-GKASEAGEAVEAGEASKA 261
Query: 299 GDAEESNDASENGDATEKKETG 364
G A E+ +ASE G+A+E E G
Sbjct: 262 GRASEAGEASEAGEASEAGEAG 283
Score = 31.9 bits (69), Expect = 0.56
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +2
Query: 176 TSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKK 355
T +AS + + EA+E+ G+ + EA E S E G+A ++++ASE G+A+E
Sbjct: 53 TGEASEASETGEATGEAGEASET-GEASEASEAGEAS--ETGEAGKASEASETGEASEAG 109
Query: 356 E 358
E
Sbjct: 110 E 110
Score = 31.9 bits (69), Expect = 0.56
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Frame = +2
Query: 206 KXSPA-KXVEAAESN--GKENGTDEAPEDSPA-ENGDAEESNDASENGDAT 346
K S A + VEA E++ G+ + EA E A E G+A E+ +ASE+G+AT
Sbjct: 245 KASEAGEAVEAGEASKAGRASEAGEASEAGEASEAGEAGEAGEASEDGEAT 295
Score = 31.5 bits (68), Expect = 0.74
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +2
Query: 131 AAAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAE 310
A+ A + A E +++ + + VEA E++ K EA E S A G A
Sbjct: 160 ASEATGEASEAGEASEASKAGKASEAGEAGEAVEAGEAS-KAGRASEAGEASEA--GKAS 216
Query: 311 ESNDASENGDATE 349
E+++ASE G+A+E
Sbjct: 217 EASEASETGEASE 229
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = +2
Query: 122 ATMAAAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAEN- 298
A+ A A++ E + E + K S A GK + EA E A
Sbjct: 105 ASEAGEAIEADEATGEAGEANEASKAG-KASEAGEASEVGGAGKASEAGEASETGEASEA 163
Query: 299 -GDAEESNDASENGDATEKKETGVKRKSV 382
G+A E+ +ASE A + E G ++V
Sbjct: 164 TGEASEAGEASEASKAGKASEAGEAGEAV 192
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKS 379
EA+E+ T EA E E +A ++ ASE G+A E E G K+
Sbjct: 153 EASETGEASEATGEASE--AGEASEASKAGKASEAGEAGEAVEAGEASKA 200
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKS 379
EA E++ T EA E S A G+A E++ A+E +A E E G K+
Sbjct: 284 EAGEASEDGEATGEAGEASIA--GEAGEASKAAEASEAGEASEAGEASKA 331
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 221 KXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKE 358
K EA+E+ G+ + EA E A G+A E+N+AS+ G A+E E
Sbjct: 95 KASEASET-GEASEAGEAIEADEA-TGEAGEANEASKAGKASEAGE 138
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 149 KQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDAS 328
K A E + E + + S A A GK + EA E E G+A ++ AS
Sbjct: 147 KASEAGEASETGEASEATGEASEAGEASEASKAGKASEAGEAGE--AVEAGEASKAGRAS 204
Query: 329 ENGDATE 349
E G+A+E
Sbjct: 205 EAGEASE 211
Score = 27.9 bits (59), Expect = 9.1
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Frame = +2
Query: 134 AAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPA----ENG 301
A+ K A E + E + + S A A + EA E S A E G
Sbjct: 209 ASEAGKASEASEASETGEASEATGEASEAGEASKAGKASEAGEAVEAGEASKAGRASEAG 268
Query: 302 DAEESNDASENGDATEKKE 358
+A E+ +ASE G+A E E
Sbjct: 269 EASEAGEASEAGEAGEAGE 287
>SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15)
Length = 979
Score = 35.5 bits (78), Expect = 0.045
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 364
EA+E+ G ++ +E G+A E+ +ASE G+A++ E G
Sbjct: 418 EASEAGGASEASEAGEAGGASEAGEASEAGEASEAGEASKASEAG 462
Score = 35.1 bits (77), Expect = 0.060
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +2
Query: 134 AAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESN-----GKENGTDEAPEDSPAEN 298
A + VA E V +E + + EA+E+ G+ EA E +
Sbjct: 639 AGEASEAGVAGEAVEGSEASKAGEAGEAVEAGEASEAGEAIEAGEAGEASEASEAAGEAT 698
Query: 299 GDAEESNDASENGDATEKKETG 364
G+A E+++ASE G+A+E E G
Sbjct: 699 GEAGEASEASEAGEASEAGEAG 720
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 218 AKXVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENGDATEKKETG 364
A V A G+ EA ED A E G+ E+++ASE G+A+E E G
Sbjct: 779 ASEVGEASEAGENGVASEAGEDGEASEAGEDGEASEASEAGEASEASEAG 828
Score = 33.5 bits (73), Expect = 0.18
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +2
Query: 134 AAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEE 313
A+ + A E ++E + + EA E++ + G EA E S A G+A E
Sbjct: 875 ASEAGEASKAGEASKASEAGEAGEASEAGEASEAGEAS-EAGGASEAGEASEA--GEASE 931
Query: 314 SNDASENGDATEKKETGVKRKSVA 385
+ +ASE G+A+E E +++A
Sbjct: 932 AGEASEAGEASEAVEASEASEAIA 955
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 161 APEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENG 337
A E ++E + +K EA E++ + G EA E S A E +A E++ ASE G
Sbjct: 437 ASEAGEASEAGEASEAGEASKASEAGEAS-EAGGASEAGEASEAGEASEAGEASKASEAG 495
Query: 338 DATEKKETGVKRKSVA 385
+A+E E +++A
Sbjct: 496 EASEAVEASEASEAIA 511
Score = 33.1 bits (72), Expect = 0.24
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = +2
Query: 134 AAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEE 313
A + VA E V +E + + VEA E++ + EA E A G+A E
Sbjct: 722 AGEASEAGVAGEAVEGSEASKA---GEAGEAVEAGEAS-EAGEASEAGEAGKA--GEASE 775
Query: 314 SNDASENGDATEKKETGV 367
+ +ASE G+A+E E GV
Sbjct: 776 AGEASEVGEASEAGENGV 793
Score = 31.9 bits (69), Expect = 0.56
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 161 APEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENG 337
A E ++E + V + EA+E+ G++ EA E A E +A E+++ASE G
Sbjct: 779 ASEVGEASEAGENGVASEAGEDGEASEA-GEDGEASEASEAGEASEASEAGEASEASEAG 837
Query: 338 DATEKKETG 364
+A E E G
Sbjct: 838 EAGEAGEAG 846
Score = 31.9 bits (69), Expect = 0.56
Identities = 19/77 (24%), Positives = 32/77 (41%)
Frame = +2
Query: 134 AAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEE 313
A+ + VA E E + ++ EA E++ + + E G+A E
Sbjct: 785 ASEAGENGVASEAGEDGEASEAGEDGEASEASEAGEASEASEAGEASEASEAGEAGEAGE 844
Query: 314 SNDASENGDATEKKETG 364
+ +A E G+A E E G
Sbjct: 845 AGEAGEAGEAGEASEAG 861
Score = 31.5 bits (68), Expect = 0.74
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +2
Query: 137 AAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEES 316
AA + A E ++E + + EA+E+ + + E G+A E+
Sbjct: 693 AAGEATGEAGEASEASEAGEASEAGEAGEAGEASEAGVAGEAVEGSEASKAGEAGEAVEA 752
Query: 317 NDASENGDATEKKETG 364
+ASE G+A+E E G
Sbjct: 753 GEASEAGEASEAGEAG 768
Score = 31.5 bits (68), Expect = 0.74
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 161 APEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENG 337
A E ++E + +K EA E+ G+ + EA E A E G A E+ +ASE G
Sbjct: 869 ASEAGEASEAGEASKAGEASKASEAGEA-GEASEAGEASEAGEASEAGGASEAGEASEAG 927
Query: 338 DATEKKE 358
+A+E E
Sbjct: 928 EASEAGE 934
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 206 KXSPAKXVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENGDATE 349
+ S A A G+ G EA E S A E +A E++ ASE G+A+E
Sbjct: 418 EASEAGGASEASEAGEAGGASEAGEASEAGEASEAGEASKASEAGEASE 466
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVK 370
EA+E+ G + + +E G+A E+ +ASE +A+E E K
Sbjct: 910 EASEAGGASEAGEASEAGEASEAGEASEAGEASEAVEASEASEAIAK 956
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 364
EA E+ G ++ E A E++ ASE G+A E E G
Sbjct: 859 EAGEAGGASEASEAGEASEAGEASKAGEASKASEAGEAGEASEAG 903
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 203 VKXSPAKXVEAAESNGKENGTDEAPEDSPAE-NGDAEESNDASENGDATEKKETG 364
VK + EA E+ G+ + EA E S A G+A E ++AS+ G+A E E G
Sbjct: 617 VKLEAGEASEAGEA-GETSEAGEAGEASEAGVAGEAVEGSEASKAGEAGEAVEAG 670
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 364
EA+E+ G+ G EA +E G+A E+ +AS+ G+A++ E G
Sbjct: 856 EASEA-GEAGGASEA-----SEAGEASEAGEASKAGEASKASEAG 894
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 218 AKXVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENGDATEKKE 358
+K EA+E++ + G EA E A E +A E+ ASE G+A+E E
Sbjct: 402 SKASEASEAS-EAGGASEASEAGGASEASEAGEAGGASEAGEASEAGE 448
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 34.3 bits (75), Expect = 0.10
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +2
Query: 164 PEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDA 343
P T+ E KA VK S A ++ ES E+G +S E+G++ ES ++ E+G++
Sbjct: 874 PAKETANE-KAGMVKNSKASKEDSNESG--ESGESGKSGES-GESGESGESGESGESGES 929
Query: 344 TEKKETGVKRKSVA 385
E E+G S A
Sbjct: 930 GESGESGESGDSAA 943
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENGDATEKKETGVKRKS 379
E+ ES GK + E+ E + E+G++ ES ++ E+G++ E E+G +S
Sbjct: 666 ESGES-GKSGESGESGESGESGESGESGESGESGESGESGESGESGESGES 715
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/79 (20%), Positives = 34/79 (43%)
Frame = +2
Query: 149 KQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDAS 328
K + E S E S + E+ ES + E+G++ +S ++
Sbjct: 672 KSGESGESGESGESGESGESGESGESGESGESGESGESGESGESGESGESGESGDSGESQ 731
Query: 329 ENGDATEKKETGVKRKSVA 385
+N D++ +K G+ ++ V+
Sbjct: 732 DNADSSIQKRNGIPQEKVS 750
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 364
E + S+GKE+ D + S +E+GD+++S ++ E+G+ + G
Sbjct: 569 EGSASSGKEDDMDGS--GSASESGDSDDSGNSGESGEGEPDEGDG 611
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 233 AAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKS 379
A+ +GK E+ D E+G++ ES + E+G++ E E+G +S
Sbjct: 645 ASRESGKLKA--ESDIDGSGESGESGESGKSGESGESGESGESGESGES 691
>SB_39187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 239 ESNGKENGTDEAPEDSPAENGDAEESNDASENGDATE 349
+ +GK + D+ +D ENGD +E++D +EN D E
Sbjct: 48 DDDGKNDDDDKNDDDDDDENGDDDENDDDNENDDDDE 84
>SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08)
Length = 654
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +2
Query: 122 ATMAAAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDE---APEDSPA 292
A +++ D E S + S K +PAK +++ + ++ +DE P S
Sbjct: 26 AKQESSSEDDSSDDDEEEKSKKKAVSKEKKTPAKQESSSDDSSSDDSSDEDTKMPTKSKL 85
Query: 293 ENGDAEESNDASENGDATEKKETGVKRKSVA 385
+NG ++ + S + D++ + E KR A
Sbjct: 86 KNGTKTKAKEESSSSDSSSEDEPPAKRPKSA 116
>SB_51703| Best HMM Match : LRR_1 (HMM E-Value=1.9e-06)
Length = 632
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 221 KXVEAAESNGKENGTDEAPEDS--PAENGDAEESNDASENGDATEKKETGVKRKSVA 385
K ++A++ GK++G E D E DA + N+ ++ D +KK+TG + A
Sbjct: 493 KRKDSAKAKGKDDGEFEISADCICQGEKEDAGQDNEEAKKADGADKKKTGKEHSEKA 549
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +2
Query: 122 ATMAAAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDE---APEDSPA 292
A +++ D E S + S K +PAK +++ + ++ +DE P S
Sbjct: 269 AKQESSSGDDSSDDDEEEKSKKKAVSKEKKTPAKQESSSDDSSSDDSSDEDTKMPTKSKL 328
Query: 293 ENGDAEESNDASENGDATEKKETGVKRKSVA 385
+NG ++ + S + D++ + E KR A
Sbjct: 329 KNGTKTKAKEESSSSDSSSEDEPPAKRPKSA 359
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/66 (21%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 185 EPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENG-DAEESNDASENGDATEKKET 361
+PK K +P K ++E + + DE P+ G + ++S D++++++
Sbjct: 132 KPKKKVEKKTPTKQESSSEEDDSSDDKDEKPKKKADNKGKKTQAKQESSSEDDSSDEEDE 191
Query: 362 GVKRKS 379
K+K+
Sbjct: 192 KPKKKA 197
>SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1183
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 206 KXSPAKXVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENGDATEKKETG 364
+ S V A G+ EA E A E G+A E+ +ASE G+A+E E G
Sbjct: 173 EASEVGEVSEASEAGEAGEASEAVEAGEASEAGEASEAGEASEAGEASEAGEAG 226
Score = 32.3 bits (70), Expect = 0.42
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +2
Query: 221 KXVEAAESNG--KENGTDEAPEDSPA-ENGDAEESNDASENGDATEKKE 358
+ +EA E G + G EA ED A E G A E+ ASE G+ +E E
Sbjct: 565 EAIEAGEDGGASEAGGASEAGEDGGAGEAGGASEAGGASEAGEVSEAGE 613
Score = 31.9 bits (69), Expect = 0.56
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +2
Query: 134 AAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPA----ENG 301
A + VA E + E + ++ EA E+ G+ + EA E S A E G
Sbjct: 153 AGEASEVGVAREASEAGEASEASEVGEVSEASEAGEA-GEASEAVEAGEASEAGEASEAG 211
Query: 302 DAEESNDASENGDATEKKETG 364
+A E+ +ASE G+A E E G
Sbjct: 212 EASEAGEASEAGEAGEASEAG 232
Score = 31.9 bits (69), Expect = 0.56
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Frame = +2
Query: 134 AAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNG--KENGTDEAPEDSPA----E 295
A K VA E ++E + +K EA+++ G + G EA E S A E
Sbjct: 494 AGGASKAGVAGEASEASETIEA---GEASKAGEASKAGGVSEAGGASEAGEASEAGGASE 550
Query: 296 NGDAEESNDASENGDATEKKETG 364
G+A E+ ASE G+A E E G
Sbjct: 551 AGEASEAGGASEAGEAIEAGEDG 573
Score = 31.5 bits (68), Expect = 0.74
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +2
Query: 122 ATMAAAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESN--GKENGTDEAPEDSPA- 292
A+ A+ + A E ++E + ++ EA E++ G+ + EA E A
Sbjct: 38 ASGVASKASEAGEASEAGEASEAGEASEAGEASEAGEAGEASEAGEASEAGEASEAGKAS 97
Query: 293 ENGDAEESNDASENGDATEKKETGV 367
E G+A + +ASE G+ E E GV
Sbjct: 98 EAGEASVAGEASEAGETVEASEAGV 122
Score = 31.5 bits (68), Expect = 0.74
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +2
Query: 161 APEXVTSTEPKASPVKXSPAKXVEAAESN--GKENGTDEAPEDSPA----ENGDAEESND 322
A E V + E + + EA E++ G+ EA E S A E G+A + +
Sbjct: 192 ASEAVEAGEASEAGEASEAGEASEAGEASEAGEAGEASEAGEASEAGKASEAGEASVAGE 251
Query: 323 ASENGDATEKKETGV 367
ASE G+ E E GV
Sbjct: 252 ASEAGETVEASEAGV 266
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = +2
Query: 134 AAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEE 313
A+ V + A E + E + ++ EA+E+ G+ + EA E E G+A E
Sbjct: 174 ASEVGEVSEASEAGEAGEASEAVEAGEASEAGEASEA-GEASEAGEASE--AGEAGEASE 230
Query: 314 SNDASENGDATEKKETGV 367
+ +ASE G A+E E V
Sbjct: 231 AGEASEAGKASEAGEASV 248
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +2
Query: 134 AAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAE-SNGKENG-TDEAPEDSPA-ENGD 304
A + VA E + E + ++ EA E S E G EA E S A E G+
Sbjct: 297 AGEASEVGVAREASEAGEASEASEVGEVSEASEAGEASEAVEAGEASEAGEASKASEAGE 356
Query: 305 AEESNDASENGDATEKKE 358
A E+ +ASE G+A E E
Sbjct: 357 ASEAGEASEAGEAGEASE 374
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 206 KXSPAKXVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENGDATEKKETG 364
+ S V A G+ + EA E S A E A E+ +ASE G+A+E E G
Sbjct: 317 EASEVGEVSEASEAGEASEAVEAGEASEAGEASKASEAGEASEAGEASEAGEAG 370
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +2
Query: 134 AAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPA-----EN 298
A + A E +TE ++ EA E+ G+ EA E S A
Sbjct: 409 AGVAGEASEAGEASEATEADEVGEVSEASEAGEAGEA-GEAGEASEAGEASEAGEVCEAG 467
Query: 299 GDAEESNDASENGDATEKKETG 364
G+A E+ +A E G+A+E ETG
Sbjct: 468 GEASEAGEAGEIGEASEAGETG 489
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 134 AAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPA-ENGDAE 310
A + A E ++E + ++ EA E+ G++ G EA S A E+G A
Sbjct: 533 AGGASEAGEASEAGGASEAGEASEAGGASEAGEAIEA-GEDGGASEAGGASEAGEDGGAG 591
Query: 311 ESNDASENGDATEKKE 358
E+ ASE G A+E E
Sbjct: 592 EAGGASEAGGASEAGE 607
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +2
Query: 194 ASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKR 373
AS V ++ EA+E+ G+ + EA E E +A E+ +ASE G+A+E E
Sbjct: 38 ASGVASKASEAGEASEA-GEASEAGEASE--AGEASEAGEAGEASEAGEASEAGEASEAG 94
Query: 374 KS 379
K+
Sbjct: 95 KA 96
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 161 APEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPA-ENGDAEE---SNDAS 328
A E + E + V + EA E+ G+ EA E A E G+A E + +AS
Sbjct: 252 ASEAGETVEASEAGVAGEVGEVSEAGEA-GEVGKASEAGETGEASEAGEASEVGVAREAS 310
Query: 329 ENGDATEKKETG 364
E G+A+E E G
Sbjct: 311 EAGEASEASEVG 322
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = +2
Query: 134 AAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEE 313
A V K A E ++E + + EA E++ + + E +A E
Sbjct: 279 AGEVGKASEAGETGEASEAGEASEVGVAREASEAGEASEASEVGEVSEASEAGEASEAVE 338
Query: 314 SNDASENGDATEKKETG 364
+ +ASE G+A++ E G
Sbjct: 339 AGEASEAGEASKASEAG 355
>SB_35523| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1410
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 239 ESNGKENGTDEAPEDSPAENG-DAEESNDASENGDATEKKETG 364
+S+G E G+D+ PE A +G DA ES + + TE E G
Sbjct: 1306 DSSGDEAGSDDEPESEYAPSGSDAAESEEDEDFSSETETSEEG 1348
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/78 (21%), Positives = 35/78 (44%)
Frame = +2
Query: 146 DKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 325
DK + + S + S + + E ESNG + + + E+ ++ESN++
Sbjct: 126 DKSNESDKSNESDKSNESDKRNESDESDEDDESNGSDESNESDESNGSDESNGSDESNES 185
Query: 326 SENGDATEKKETGVKRKS 379
E+ ++ E E+ +S
Sbjct: 186 DESNESDESNESDESNES 203
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Frame = +2
Query: 230 EAAESNGKE--NGTDEAPEDSPA----ENGDAEESNDASENGDATEKKETGVKRKS 379
E+ ESNG + NG+DE+ E + E+ +++ESN++ E+ + E E+ +S
Sbjct: 166 ESDESNGSDESNGSDESNESDESNESDESNESDESNESDESNGSDESNESDESNES 221
Score = 31.9 bits (69), Expect = 0.56
Identities = 17/78 (21%), Positives = 34/78 (43%)
Frame = +2
Query: 146 DKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 325
D+ + E S E S + E+ ESN + + + E+ +++ESN++
Sbjct: 162 DESNESDESNGSDESNGSDESNESDESNESDESNESDESNESDESNGSDESNESDESNES 221
Query: 326 SENGDATEKKETGVKRKS 379
E+ + E E+ +S
Sbjct: 222 DESNGSDESNESDESNES 239
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +2
Query: 146 DKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 325
D+ + E S E S + E+ ESNG + + + E+ ++ESN++
Sbjct: 174 DESNGSDESNESDESNESDESNESDESNESDESNGSDESNESDESNESDESNGSDESNES 233
Query: 326 SENGDATE 349
E+ ++ E
Sbjct: 234 DESNESDE 241
Score = 31.5 bits (68), Expect = 0.74
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 146 DKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKE--NGTDEAPEDSPAENGDAEESN 319
D+ + E S E S + E+ ESN + NG+DE+ E E+ +++ESN
Sbjct: 186 DESNESDESNESDESNESDESNGSDESNESDESNESDESNGSDESNESD--ESNESDESN 243
Query: 320 DASENGDATEKKET 361
+ E+ ++ E E+
Sbjct: 244 GSDESYESDESDES 257
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +2
Query: 203 VKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKS 379
+ S + E+ ESN + + + E+ +++ESN++ E+ ++ + E+ +S
Sbjct: 79 ISSSKDESDESDESNESDESNESDKSNESDESNESDESNESDESNESDKSNESDKSNES 137
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/78 (20%), Positives = 33/78 (42%)
Frame = +2
Query: 146 DKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 325
D+ + E S E S + E+ ESN + + + E+ ++ESN++
Sbjct: 156 DESNGSDESNESDESNGSDESNGSDESNESDESNESDESNESDESNESDESNGSDESNES 215
Query: 326 SENGDATEKKETGVKRKS 379
E+ ++ E + +S
Sbjct: 216 DESNESDESNGSDESNES 233
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/78 (23%), Positives = 40/78 (51%)
Frame = +2
Query: 146 DKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 325
+++ V E S+ S + E+ ES+ K N +DE+ E E+ +++ESN++
Sbjct: 69 EEEVVTDERGISSSKDESDESDESNESDESNESD-KSNESDESNESD--ESNESDESNES 125
Query: 326 SENGDATEKKETGVKRKS 379
++ ++ + E+ +S
Sbjct: 126 DKSNESDKSNESDKSNES 143
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +2
Query: 146 DKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKE--NGTDEAPEDSPAENGD----A 307
D+ + E S E S + E+ ESNG + N +DE+ E + D +
Sbjct: 192 DESNESDESNESDESNGSDESNESDESNESDESNGSDESNESDESNESDESNGSDESYES 251
Query: 308 EESNDASENG 337
+ES++++E+G
Sbjct: 252 DESDESNESG 261
>SB_26361| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1898
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 200 PVKXSPAKXVEAAESNGKENGTDE--APEDSPAENGDAEESNDASENGDATEKKETG 364
P K + V++ + + + G + A +D+ A+NG A + NDA GD + + G
Sbjct: 410 PEKKLYVQTVDSPDDDDEAEGNHDGGAGDDNDADNGGAGDDNDADNGGDGCDGDDDG 466
>SB_56912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKET 361
E +E+NG ENG +EA E+ PA D + A+E + +T
Sbjct: 315 EDSEANGDENGHNEASEEKPALKRDGTMAVTAAEGAEILGDHDT 358
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 32.7 bits (71), Expect = 0.32
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +2
Query: 122 ATMAAAAVDKQXVA-PEXVTSTEPKASPVKX-SPAKXVEAAESNGKENGTDEAPEDSPAE 295
A+ A AV + A PE + + K K +PA +A ++ E + D+P E
Sbjct: 32 ASDATEAVAPEAPASPESENTDDFKEPEAKEETPAAAPKAEDTPALETSGESKLPDTPVE 91
Query: 296 NGDAEESNDASENGDATEKKE 358
+ ++E+ +D+ ++GD E ++
Sbjct: 92 DEESEDDDDSFDDGDDEEDED 112
Score = 31.5 bits (68), Expect = 0.74
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +2
Query: 137 AAVDKQXVAPEXVTSTEPKA--SPVKXSPAKXVEAAESNGK-ENGTDEAPEDSPAENGDA 307
AA K P TS E K +PV+ ++ + + +G E D+ ++ +++GD
Sbjct: 66 AAAPKAEDTPALETSGESKLPDTPVEDEESEDDDDSFDDGDDEEDEDDEDDEEDSDDGDD 125
Query: 308 EESNDASENGDATEKKE 358
E+ S +GDA K+
Sbjct: 126 EDDEKESGDGDAGNAKD 142
>SB_29898| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.0085)
Length = 350
Score = 32.7 bits (71), Expect = 0.32
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 179 STEPKASPVKXSPAKXVEAAESNGKENG-TDEAPEDSPAENGDAEESNDASENGDATEKK 355
+TE + SP K E +G+E+ T E PED + +E+ +EN A +K
Sbjct: 23 TTEEELSPAAQDETKDEPLQEDDGEEDEETQEEPEDDSEGGTENDENPGEAENEVAEVEK 82
Query: 356 ETGVKRK 376
+ V K
Sbjct: 83 DENVPEK 89
>SB_32573| Best HMM Match : His_leader (HMM E-Value=0.0014)
Length = 134
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/56 (25%), Positives = 22/56 (39%)
Frame = -3
Query: 425 SSREWSFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 258
SS ++ H P SSS S+ + HH + HHH + + +H
Sbjct: 76 SSSSSIIIIIHHHHPSSSSSSSSIIIIHHHHPSSSSIIIIHHHHHHPSSSSIINHH 131
>SB_11869| Best HMM Match : Excalibur (HMM E-Value=8)
Length = 269
Score = 31.5 bits (68), Expect = 0.74
Identities = 20/77 (25%), Positives = 39/77 (50%)
Frame = +2
Query: 134 AAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEE 313
AAA ++ AP+ + + + + E +++ + N TD++ ED+ +A+
Sbjct: 143 AAAPKQEEEAPKDEAAASEEVAAATEGTSAATETNDASAEVNETDKSAEDA----SEAKP 198
Query: 314 SNDASENGDATEKKETG 364
+DA+E G A +ETG
Sbjct: 199 EDDAAE-GAAIPSEETG 214
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Frame = +2
Query: 149 KQXVAPEXVTSTEPK---ASPVKXSPAKXVEAAESNGKENGTDEAP---EDSPAENGD-- 304
++ +P T+T+ ++P + +P++ AA +E DEA E + A G
Sbjct: 113 EEAASPSDETTTDSPWDASAPTEEAPSRDEAAAPKQEEEAPKDEAAASEEVAAATEGTSA 172
Query: 305 AEESNDASENGDATEK 352
A E+NDAS + T+K
Sbjct: 173 ATETNDASAEVNETDK 188
>SB_15757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 31.1 bits (67), Expect = 0.97
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +2
Query: 239 ESNGKENGTDEAP----EDSPAENGDAEESNDASENGDATEKKETGVKRKSVALD 391
E+ G+E T+EA E PAE AEE + EN + EKKE K++ D
Sbjct: 9 EAGGEEEKTEEAAPAEGEAPPAEEKPAEEESKPEENKE-EEKKEESEKKEEDKTD 62
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = +2
Query: 167 EXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDAT 346
E E +A P + PA+ ES +EN +E E+S + D + E
Sbjct: 18 EEAAPAEGEAPPAEEKPAEE----ESKPEENKEEEKKEESEKKEEDKTDGGGGGEEKKDE 73
Query: 347 EKKE 358
EKKE
Sbjct: 74 EKKE 77
>SB_3098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 31.1 bits (67), Expect = 0.97
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +2
Query: 239 ESNGKENG----TDEAPEDSPAENGDAEESNDASENGDATEKKE 358
ESNG ENG T+E P S +E+ EE+ + G +E K+
Sbjct: 25 ESNGAENGVPSDTEEKPLSSTSEHDSNEENEAPANEGSDSEDKD 68
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 31.1 bits (67), Expect = 0.97
Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = +2
Query: 122 ATMAAAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPA-EN 298
A A K APE + E A+P + A E+ K T APE S A E
Sbjct: 575 AAPKTTAAPKTSAAPETTAAPETTAAPETTMAPETTTAPETTAKAE-TTVAPETSAAPET 633
Query: 299 GDAEESNDASENGDATE 349
A E+ A E A E
Sbjct: 634 TAAPETTAAPETTMAPE 650
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +2
Query: 122 ATMAAAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPA-EN 298
AT A + VAPE + E A+P + + A+E+ T AP+ + A +
Sbjct: 527 ATPETTAAPETTVAPETTMTPETTAAPETTTAPETTAASETTAASE-TTAAPKTTAAPKT 585
Query: 299 GDAEESNDASENGDATE 349
A E+ A E A E
Sbjct: 586 SAAPETTAAPETTAAPE 602
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 122 ATMAAAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENG 301
A A + APE +++E A+P + + A+E+ T AP+ + A
Sbjct: 695 AAPETTAAPETTAAPETTSASETTAAPETTTAPETTAASETTAVLE-TTAAPKTTAAPET 753
Query: 302 DAE-ESNDASENGDATE 349
AE E+ ASE A+E
Sbjct: 754 TAEPETTAASETTVASE 770
Score = 28.7 bits (61), Expect = 5.2
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 140 AVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPA-ENGDAEES 316
A + VAPE + E A+P + + A E+ T APE + A E A E+
Sbjct: 509 AAPETTVAPETTIAPETTATPETTAAPETTVAPETTMTPE-TTAAPETTTAPETTAASET 567
Query: 317 NDASENGDATEKKETGVKRKSVA 385
ASE A K T + S A
Sbjct: 568 TAASETTAA--PKTTAAPKTSAA 588
>SB_52178| Best HMM Match : Drf_FH1 (HMM E-Value=2.2)
Length = 404
Score = 31.1 bits (67), Expect = 0.97
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 173 VTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEK 352
+T P S K K A S K+ E+P+ SPA G E ++ + E G ++
Sbjct: 265 LTDVPPLTSKEKKHE-KTKTAKPSKAKKPKKSESPQRSPANTG-IESASGSGETGTKPKR 322
Query: 353 KE--TGVKRK 376
K+ T +KRK
Sbjct: 323 KKPGTAIKRK 332
>SB_50934| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 855
Score = 31.1 bits (67), Expect = 0.97
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 263 TDEAPEDSPAENGDAEESNDASENGD-ATEKKETGVK 370
T E PE +P + DA +S DAS D A +++E +K
Sbjct: 24 TKEEPESAPKVDDDAGKSRDASRTDDEAVQREEEAIK 60
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 31.1 bits (67), Expect = 0.97
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = +2
Query: 239 ESNGKENGTDEAPEDSPAENG-DAEESNDAS----ENGDATEKKETGVKR 373
E+ ++GTDE EDS E+ D + SN AS E G EK +T ++R
Sbjct: 1542 EATRSDDGTDEKTEDSMQEDAKDLDSSNTASDTTKEKGKNKEKDKTVLER 1591
>SB_30368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 31.1 bits (67), Expect = 0.97
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 182 TEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENGDATEKKE 358
+E K V+ A G+ + EA E S A E G+A E+ +ASE G+ E E
Sbjct: 13 SEAKPRLVQPLDKNRAGGASEAGEASEAGEASEASEASEAGEASEAGEASEAGEVGEAGE 72
Query: 359 TG 364
G
Sbjct: 73 AG 74
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 364
EA+E+ ++ + +E G+A E+ + E G+A E E G
Sbjct: 36 EASEAGEASEASEASEAGEASEAGEASEAGEVGEAGEAGEAGEAG 80
>SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045)
Length = 191
Score = 31.1 bits (67), Expect = 0.97
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Frame = +2
Query: 206 KXSPAKXVEAAESNGKENGTDEAPEDSPAENG-----DAEESNDASENGD--ATEKKETG 364
K K +AAE+ ++ EAPE+ PAE+ + E+ DAS++G+ A +K+ G
Sbjct: 51 KMPSKKGAKAAEAQPEKKA--EAPEEKPAEDSKDQAVEESETKDASKDGEGNAADKRARG 108
Query: 365 VKRKS 379
+K+
Sbjct: 109 RPKKA 113
>SB_344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 510
Score = 31.1 bits (67), Expect = 0.97
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 185 EPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 364
+ + SP+ K + A+S+ + + P D G +E + D +EN DA E K +
Sbjct: 286 DTQKSPIDQREQKAEDKADSSKEADVKMNEPADVAIVRGQSEGAEDENENNDA-ENKASK 344
Query: 365 VKRKSVALD 391
+ +SV D
Sbjct: 345 RESRSVEKD 353
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 197 SPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRK 376
SP+ K + A+S+ + + P D G +E + D +EN DA E K + + +
Sbjct: 405 SPIDQREQKAEDKADSSKEADVKMNEPADVAIVRGQSEGAEDKNENNDA-ENKASKRESR 463
Query: 377 SVALD 391
SV D
Sbjct: 464 SVEKD 468
>SB_52574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 242 SNGKENGTDEAPEDSPAENGDAEESNDASENGDA 343
S+G N +DE E S GD +E++ + NGD+
Sbjct: 30 SSGSSNSSDEEREKSSQTAGDEDENSQENVNGDS 63
>SB_47910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 242 SNGKENGTDEAPEDSPAE--NGDAEESNDASENGDATEKKETGVKRKS 379
SNG +NG E ED+P E +GD S+ + NGDA + T R++
Sbjct: 333 SNGVDNGVAE-DEDAPMEMEDGDESTSSSSVINGDAPTDEVTLSPRRN 379
>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
Length = 783
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +2
Query: 173 VTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEK 352
V + P + P PAK AAE +E G E ED E GD ++ + E+
Sbjct: 363 VEADTPGSEPPAEEPAKPDSAAE---QEEGK-EGDEDEDGEGGDKKKKKKKKKK-KGVEE 417
Query: 353 KETGVKRKSVAL 388
+E VK+ + AL
Sbjct: 418 EEKKVKKPNKAL 429
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 236 AESNGKENGTDE-APEDSPAENGDAEESNDASENGDATEKKETGVKRKSVALD 391
A++ G E +E A DS AE + +E D E+G+ +KK+ K+K ++
Sbjct: 365 ADTPGSEPPAEEPAKPDSAAEQEEGKEG-DEDEDGEGGDKKKKKKKKKKKGVE 416
>SB_5548| Best HMM Match : PT (HMM E-Value=3.1)
Length = 157
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +2
Query: 164 PEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDA 343
PE T +P+ PV+ P E E+ ++ PED P D +E + D
Sbjct: 70 PEDRTEYKPEDKPVEKKPEGKPENQPEKKPEDKPEDKPEDKPE---DKQEDKPEDKQEDK 126
Query: 344 TEKK 355
E K
Sbjct: 127 PEAK 130
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 161 APEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAE 295
+P+ T PK SP K S + A N E+ T+ PED P E
Sbjct: 42 SPKTSPKTSPKTSP-KTSQKQAGRQA-GNKPEDRTEYKPEDKPVE 84
>SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 245 NGKENGTDEAPEDSPAE--NGDAEESNDASENGDATEKKETGVKRKSVAL 388
N ++ G+ EDSP GD+ + + A E GD+++ + +G R+ +L
Sbjct: 769 NSEDAGSSLGEEDSPGSCLEGDSCDLSGAREEGDSSDSESSGPARRPRSL 818
>SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5)
Length = 752
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +2
Query: 191 KASPVKXSPA-KXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENG--DATEKKET 361
K SPA K + + G +NG +E+ D P D+++S+ S+ G +A + E
Sbjct: 271 KGKRTSISPALKAISEENTPGSKNGKEESEIDEPYVASDSDDSSGLSKPGSNEAPIQDED 330
Query: 362 GVKRKS 379
KR S
Sbjct: 331 IQKRSS 336
>SB_52084| Best HMM Match : Vicilin_N (HMM E-Value=1.7)
Length = 520
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +2
Query: 191 KASPVKXSPA-KXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENG--DATEKKET 361
K SPA K + + G +NG +E+ D P D+++S+ S+ G +A + E
Sbjct: 181 KGKRTSISPALKAISEENTPGSKNGKEESEIDEPYVASDSDDSSGLSKPGSNEAPIQDED 240
Query: 362 GVKRKS 379
KR S
Sbjct: 241 IQKRSS 246
>SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10)
Length = 416
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = -3
Query: 410 SFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 258
S ++ H P S S+ + HH S + HHH ++++ +H +H
Sbjct: 97 SIIIIHHHHP----SSSSIIIIHHHPSSSIIIIIHHHHPSSSSIIIIHHHH 143
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = -3
Query: 410 SFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 258
S ++ +H SSS + HH S + HHH ++++ +H +H
Sbjct: 121 SIIIIIHHHHPSSSS--IIIIHHHHPSSSSIIIIHHHHHPSSSIIIIHHHH 169
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Frame = -3
Query: 425 SSREWSFLLFLHQEPQ----ISSSHQSLSFL---WHHRSQMHRCFLQHHHFQQANLLGLH 267
SS ++ +H P I H S S + HH S + HHH ++++ +H
Sbjct: 30 SSSSIIIIIIIHHHPSSSIIIHHHHPSSSIIIIHHHHPSSSSIIIIHHHHPSSSSIIIIH 89
Query: 266 RYH 258
+H
Sbjct: 90 HHH 92
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -3
Query: 410 SFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 258
S ++ H P SS + HH S + HHH ++++ +H +H
Sbjct: 58 SIIIIHHHHP---SSSSIIIIHHHHPSSSSIIIIHHHHPSSSSIIIIHHHH 105
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/51 (19%), Positives = 21/51 (41%)
Frame = -3
Query: 410 SFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 258
S ++ +H P H S + HH + HH ++++ + +H
Sbjct: 174 SIIIIIHHHPSSIIIHHPSSSIIHHHPSSSSIIIHHHPSSSSSIIIIIHHH 224
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +2
Query: 143 VDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESND 322
V+ Q + VT P+ASP K P K E S + E P+D + ++E
Sbjct: 1941 VEHQQTSLPNVTKNRPEASPPKTDPKKPEEGRFSRFLSSILAEPPKDLVDDKKPSDEQKP 2000
Query: 323 ASE 331
+E
Sbjct: 2001 KAE 2003
>SB_14943| Best HMM Match : CRAL_TRIO (HMM E-Value=8e-05)
Length = 391
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = +2
Query: 161 APEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGD 340
+P + ++ +SPVK +P K V S E TDE E ENG +N +NG
Sbjct: 253 SPPAESKSDKPSSPVKETPVKNV---PSTASEESTDE--EKKSTENGKQYVTN-GKDNG- 305
Query: 341 ATEKKETG 364
KE G
Sbjct: 306 KNNIKENG 313
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +2
Query: 122 ATMAAAAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENG 301
A + A + VAP +TE A+P + + A E+ T APE + +
Sbjct: 200 AQLKTTAAQETTVAPGTTVATETTAAPETTTAPETTMALETTVAPEAT-MAPETTVVPDT 258
Query: 302 DAE-ESNDASENGDATEKKE 358
E E++ + D TEK E
Sbjct: 259 TVEPETSTTLKPTDVTEKPE 278
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 179 STEPKASPVKXSPAKXVEAAESNGKE--NGTDEAPEDSPAENGDAEESNDASENGDATEK 352
S+E + S A+ E E G+E +G+D + ++ ++GD E + ++ D ++
Sbjct: 387 SSEVSSESESGSDAES-EEGEGEGEEVSSGSDSSTDEEGTDDGDEEGGEEDDDDDDDDDE 445
Query: 353 KETGV 367
++G+
Sbjct: 446 NQSGI 450
>SB_58461| Best HMM Match : WH2 (HMM E-Value=0.63)
Length = 592
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +2
Query: 167 EXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDAT 346
+ +T+TEP+ P + A + E +S AEN E++ SE+ ++
Sbjct: 173 DVITTTEPQVVPEETDNNLLPSTASVEMDSSFNTEVESESKAENTQDIEADCESEDVESK 232
Query: 347 EKKETGVKRKS 379
E K +K ++
Sbjct: 233 EIKRADIKEET 243
>SB_35171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 245 NGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 364
N ++G D ED + GD ++ +D E+GD + +E G
Sbjct: 23 NEDDDGDDNDKEDGDGD-GDDDDDDDDDEDGDGDDDEEDG 61
>SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1888
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/52 (23%), Positives = 20/52 (38%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVA 385
+ N + D ++ N DA ND + + D T ET +S +
Sbjct: 322 DTTSDNDATSDNDTTSDNDTTTNNDATSDNDTTTDNDTTTDNETNTDNESAS 373
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/44 (25%), Positives = 17/44 (38%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKET 361
+A N D ++ + D ND + N DAT +T
Sbjct: 310 DATSDNDTTTNNDTTSDNDATSDNDTTSDNDTTTNNDATSDNDT 353
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/44 (25%), Positives = 18/44 (40%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKET 361
+ SN + D ++ N D NDA+ + D T +T
Sbjct: 280 DTTTSNDTTSDNDTTSDNDTTTNNDTTSDNDATSDNDTTTNNDT 323
>SB_30986| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 2682
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/72 (22%), Positives = 30/72 (41%)
Frame = +2
Query: 173 VTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEK 352
VT K + + +++ E G+EN E +DS + G + D+ GD
Sbjct: 2315 VTKASSKCMIMVEERGEGLDSVEDTGQENEGWEKDDDSVNKEGSHKSGRDSQGRGDVKGT 2374
Query: 353 KETGVKRKSVAL 388
+ T + +A+
Sbjct: 2375 RRTSDQTLFIAV 2386
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 266 DEAPEDSP--AENGDAEESNDASENGDATEKKETGV 367
D+ EDS AEN D +E NDA ++ + E+ + V
Sbjct: 30 DKETEDSDPGAENDDEQEKNDADDSDEVKEEDDVSV 65
>SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7)
Length = 810
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/60 (30%), Positives = 22/60 (36%)
Frame = +2
Query: 185 EPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 364
+PK K K S GKEN +A ED EE N S + +TG
Sbjct: 748 QPKRQDHKPKTPKASPEKRSCGKENTAKKAKEDRGTPEKQVEELNGCSVKTQVSPGHDTG 807
>SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5)
Length = 205
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKET 361
E E +E+G +E D + +ESN++ E+ ++ E E+
Sbjct: 113 EEKEEGKEEDGEEEVVTDERGISSSKDESNESDESNESDESNES 156
>SB_17045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1146
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 236 AESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 364
++S+G ++ E+ E + + AEE +S+N E++E G
Sbjct: 213 SDSDGSDDFKPESEESDDSVSSGAEEEEPSSDNNSEDEEEEVG 255
>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
Length = 3037
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 239 ESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 364
+ NG E+G D A D ++ D + A+E+ D +K +G
Sbjct: 1314 DKNGGESGEDTAAADDDNKDSDVDSVGTANEDIDEVMQKGSG 1355
>SB_32475| Best HMM Match : IWS1_C (HMM E-Value=0)
Length = 768
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 179 STEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEK 352
ST K P + +A++ N EN +PE S E + EE + SE GD+ ++
Sbjct: 96 STGEKTLPTAENKQDMEDASDDNKSENVA--SPECSNEEEKEPEEIKNKSEMGDSDKE 151
>SB_22293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1239
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 245 NGKENGTDEAPEDSPAENGDAEESNDASENG 337
N K+NG + +D+ N D E+SND ENG
Sbjct: 84 NSKDNGKIVSDDDNG--NDDDEDSNDEDENG 112
>SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 4303
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 341 HHRSQMHRCFLQHHHFQQANLLGLHRYHSLCH 246
HH+ +RC +H H Q + +G R++ LCH
Sbjct: 1292 HHKLWPYRC--EHCHRQFPSKVGFDRHNRLCH 1321
>SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5)
Length = 260
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 392 HQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 258
HQ S S S HH+ Q HR QHHH Q + H++H
Sbjct: 73 HQLQYSVYSVSSASLQHHHQRQRHR-HHQHHH--QLQYIQCHQHH 114
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/81 (23%), Positives = 28/81 (34%)
Frame = +2
Query: 149 KQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDAS 328
++ E + ASP K P K ES + PE G S
Sbjct: 197 RRRTTSETSVDSNENASPFKPPPCKRSARNESGTADKSVGGTPEAEKTAEGSKTRKRKKS 256
Query: 329 ENGDATEKKETGVKRKSVALD 391
+ +E +ETG+ +S D
Sbjct: 257 VRWEGSE-EETGLNAESETRD 276
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 28.7 bits (61), Expect = 5.2
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 161 APEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPA-ENGDAEESNDASENG 337
APE + E A+P K A ES T APE +PA E A ES A+E+
Sbjct: 480 APESTLAPEITAAPDTTMVPKSTVALESTVAPEIT-VAPETTPALETTSASESTVATEST 538
Query: 338 DATE 349
A E
Sbjct: 539 VAPE 542
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 164 PEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAEN-GDAEESNDASENGD 340
PE + + E +A P + P + E + E T+E PE P E D EES +A +
Sbjct: 799 PEVMPAAE-QAVPREIFPTEETEVIPTEETEEYTEE-PEVVPTEEPSDEEESEEAGREKE 856
Query: 341 ATEKKE 358
E+ +
Sbjct: 857 EEEEDQ 862
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +2
Query: 167 EXVTSTEPKASPVKXSPAKXVEAAES-NGKENGTDEAPEDSPAENGDAEESNDASENGDA 343
E VT E + + + E+ NG+ DE PED P D E + + +
Sbjct: 269 EKVTIEEDDVPEFEMPESDGIRVDETENGEHEAVDELPEDKPDTEADNYEQREETPTKED 328
Query: 344 TEKKE 358
K E
Sbjct: 329 ELKSE 333
>SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3)
Length = 213
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 239 ESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKE 358
E G+E +EA E++PAE D +E ++KK+
Sbjct: 172 EKEGEEFKREEAAEETPAEVADGKEKKQRRRRFSFSKKKK 211
>SB_49029| Best HMM Match : Collagen (HMM E-Value=6.7)
Length = 69
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +2
Query: 239 ESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 364
+ G + D +D ++GD E D+ +GD + E G
Sbjct: 11 DDGGSDGYGDNDDDDDGCDDGDCSEDGDSGYDGDNCDGSEVG 52
>SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 487
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +2
Query: 176 TSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKK 355
T T+P+ + V + + + S+G+E+G+D D A D + N +S +
Sbjct: 31 TQTDPEITGVDADDFEEGDYS-SSGEESGSDSDSSDEEAAGTDKSKENASSSVKTSKGVG 89
Query: 356 ETGVKRKSVAL 388
V+RK++ L
Sbjct: 90 AGQVRRKNIEL 100
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 161 APEXVTSTEPKASPVKXSPAKXV-EAAESNGKENGTDEAPEDSPAENGDAEESNDASENG 337
AP+ T ++ P+ + E +S+ E+G E +D ++GD ++ +D + G
Sbjct: 541 APKGETDKAEESQPIASENKTDIAEENQSDVPESGNSENDDD---DDGDGDDDDDDDDGG 597
Query: 338 DATEKKETG 364
D + G
Sbjct: 598 DDDNDDDGG 606
>SB_24428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 532
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 398 FLHQEPQISSSHQSLSFLWHHRSQMHRCF 312
FL + ISSS + LW +RS+ HR F
Sbjct: 398 FLKESGWISSSRFCVVHLWRNRSERHRFF 426
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 197 SPVKXSPAKXVEAAESNGKENGTDEAP--EDSPAENGDAEE-SNDASENGDATEKKETGV 367
SP K P K E + K+ D+ DS E + + N EN D +K+ETGV
Sbjct: 67 SPEK-KPEKTGETQDKGNKKGKDDKGDGGRDSKDEGSNEKNVKNGVRENPDRDDKEETGV 125
>SB_9702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = -3
Query: 383 PQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYHSLCHYFLQL 231
P +SSS QS S +H H HHH LH +H LCH+ L L
Sbjct: 101 PPLSSSSQS-SHRYHPLCHHH-----HHH--------LHHHHHLCHHHLSL 137
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 317 NDASENGDATEKKETGVKRKSV 382
+D SEN DAT+ ETG K + V
Sbjct: 738 SDQSENNDATDGSETGDKNQEV 759
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 341 HHRSQMHRCFLQHHHFQQANLLGLHRYH 258
HH+ Q H QHHH QQ + H +H
Sbjct: 243 HHQQQRHHHHEQHHHQQQQH----HHHH 266
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 176 TSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKK 355
TST+ +A K S K ++ + + K++ +DE E E AEE D + T++
Sbjct: 100 TSTQKQALTRKKS--KQSDSEDEDEKKSESDEPVETESEEESSAEEEEDEYKPEPKTKRT 157
Query: 356 ETGVKR 373
+ K+
Sbjct: 158 KASDKK 163
>SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0)
Length = 1182
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 143 VDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDE-APEDSPAENGDAEESN 319
++KQ V+P + K+SP K A ++A+S+ + G + AP PA+ G S
Sbjct: 1106 LEKQKVSP------KKKSSPKKKGKAPSSKSADSDEAQPGKKKAAPRKRPAK-GVTAASR 1158
Query: 320 DASENGDAT 346
D + DA+
Sbjct: 1159 DGDSDSDAS 1167
>SB_15164| Best HMM Match : Sas10_Utp3 (HMM E-Value=5.3)
Length = 478
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 242 SNGKENGTDEAPEDSPAENGDAEESNDASE-NGDATEKKE 358
S +G D+ +DS + GD+ +S ++ + N D+ + +E
Sbjct: 5 SESDSDGNDDESDDSTKDKGDSNQSMESDDGNDDSADSEE 44
>SB_7850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 221 KXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGD 340
K E E N ++N D +D +GD ++ +D +GD
Sbjct: 10 KEEEEDEDNDEDNDIDNDNDDDDDGDGDNDDDDDGDGDGD 49
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 161 APEXVTSTEP-KASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENG 337
+PE V TE + + V+ K ++ E GK++ + + ED+ E EE +E
Sbjct: 1626 SPESVDKTEGHERTDVEDDEKKADDSNEDIGKKDESRDQAEDAKKEESKTEEMETDAE-- 1683
Query: 338 DATEKKETG 364
++++ETG
Sbjct: 1684 --SKQEETG 1690
>SB_55276| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/72 (20%), Positives = 28/72 (38%)
Frame = +2
Query: 146 DKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 325
D + ++ ST P + SP+ + +E + T A + A+N + N
Sbjct: 89 DSEDISLSAKKSTHPSVTTSAPSPSSAEQKSEGVSPSDSTPPASGNKAADNKENHTENGT 148
Query: 326 SENGDATEKKET 361
S D + +T
Sbjct: 149 SALDDQIDASQT 160
>SB_36952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 242 SNGKENGTDEAPEDSPAENGDAEESNDASE-NGDATEKKE 358
S +G D+ +DS + GD+ +S ++ + N D+ + +E
Sbjct: 5 SESDSDGNDDESDDSTKDKGDSNQSMESDDGNDDSADSEE 44
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 161 APEXVTSTEP-KASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENG 337
+PE V TE + + V+ K ++ E GK++ + + ED+ E EE +E
Sbjct: 205 SPESVDKTEGHERTDVEDDEKKADDSNEDIGKKDESRDQAEDAKKEESKTEEMETDAE-- 262
Query: 338 DATEKKETG 364
++++ETG
Sbjct: 263 --SKQEETG 269
>SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 594
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -3
Query: 422 SREWSFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHR 264
SR S + H+ P+ H L H + H C++ H F+ L LH+
Sbjct: 143 SRLQSTVTGKHERPESQPFHLELHNRVHVEYRPHACWMCHKAFKHKTALVLHK 195
>SB_7099| Best HMM Match : Secretin_N_2 (HMM E-Value=4.6)
Length = 203
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAEN----GDAEESNDASENGDATEKKETGVKR 373
++ +++ KENG+ + +D+ +N GD + + EN + E + ++R
Sbjct: 49 DSGDTDSKENGSTYSNQDTDVDNMRNDGDGSDGSSVEENKEMHEDLKKAIQR 100
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,804,475
Number of Sequences: 59808
Number of extensions: 280106
Number of successful extensions: 1886
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1716
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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