Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_F14
(739 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g22650.2 68418.m02647 expressed protein non-consensus AT dono... 40 0.001
At5g22650.1 68418.m02646 expressed protein non-consensus AT dono... 40 0.001
At4g36980.1 68417.m05240 expressed protein 37 0.016
At1g44780.1 68414.m05130 expressed protein ; expression supporte... 36 0.028
At2g35410.1 68415.m04340 33 kDa ribonucleoprotein, chloroplast, ... 34 0.11
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 33 0.26
At4g31880.1 68417.m04531 expressed protein 32 0.35
At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar ... 32 0.35
At1g68030.1 68414.m07772 PHD finger protein-related contains low... 32 0.35
At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to SP|Q... 32 0.35
At2g22795.1 68415.m02704 expressed protein 32 0.46
At1g01490.1 68414.m00065 heavy-metal-associated domain-containin... 32 0.46
At4g08310.1 68417.m01372 expressed protein glutamic acid-rich pr... 31 0.60
At4g01260.1 68417.m00166 hypothetical protein low similarity to ... 31 0.60
At5g17690.1 68418.m02073 like heterochromatin protein (LHP1) ide... 31 1.1
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 30 1.4
At1g24190.1 68414.m03051 paired amphipathic helix repeat-contain... 30 1.4
At5g11980.1 68418.m01401 conserved oligomeric Golgi complex comp... 30 1.8
At4g39040.2 68417.m05530 expressed protein contains PF01985: Unc... 30 1.8
At4g39040.1 68417.m05529 expressed protein contains PF01985: Unc... 30 1.8
At4g12610.1 68417.m01987 transcription initiation factor IIF alp... 30 1.8
At3g60110.1 68416.m06712 DNA-binding bromodomain-containing prot... 30 1.8
At1g59750.2 68414.m06728 auxin-responsive factor (ARF1) identica... 30 1.8
At1g59750.1 68414.m06727 auxin-responsive factor (ARF1) identica... 30 1.8
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 30 1.8
At1g22450.1 68414.m02806 cytochrome c oxidase subunit 6b, putati... 29 2.4
At5g64030.1 68418.m08039 dehydration-responsive protein-related ... 29 3.2
At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profi... 29 3.2
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 29 3.2
At5g63550.1 68418.m07976 expressed protein 29 4.3
At5g52300.1 68418.m06491 low-temperature-responsive 65 kD protei... 29 4.3
At5g21430.1 68418.m02535 DNAJ heat shock N-terminal domain-conta... 29 4.3
At3g18640.1 68416.m02368 zinc finger protein-related contains si... 29 4.3
At3g06670.1 68416.m00786 expressed protein 29 4.3
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 29 4.3
At1g15780.1 68414.m01893 expressed protein 29 4.3
At3g17160.1 68416.m02189 expressed protein 28 5.6
At2g25670.2 68415.m03077 expressed protein 28 5.6
At2g25670.1 68415.m03076 expressed protein 28 5.6
At2g03140.1 68415.m00267 CAAX amino terminal protease family pro... 28 5.6
At1g30470.1 68414.m03724 SIT4 phosphatase-associated family prot... 28 5.6
At5g63530.1 68418.m07974 copper chaperone (CCH)-related low simi... 28 7.4
At5g58280.1 68418.m07296 transcriptional factor B3 family protei... 28 7.4
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 28 7.4
At5g16620.1 68418.m01946 hydroxyproline-rich glycoprotein family... 28 7.4
At5g14380.1 68418.m01680 hydroxyproline-rich glycoprotein family... 28 7.4
At3g04470.1 68416.m00474 expressed protein 28 7.4
At5g58000.1 68418.m07256 phosphatase-related weak similarity to ... 27 9.8
At5g10950.1 68418.m01271 cylicin-related low similarity to SP|Q2... 27 9.8
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 27 9.8
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 27 9.8
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 27 9.8
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 27 9.8
At4g08880.1 68417.m01464 Ulp1 protease family protein contains P... 27 9.8
At4g03300.1 68417.m00451 Ulp1 protease family protein contains P... 27 9.8
At2g16640.1 68415.m01910 chloroplast outer membrane protein, put... 27 9.8
At1g69030.1 68414.m07898 BSD domain-containing protein contains ... 27 9.8
At1g63750.1 68414.m07214 disease resistance protein (TIR-NBS-LRR... 27 9.8
At1g47970.1 68414.m05343 expressed protein 27 9.8
At1g35830.1 68414.m04452 VQ motif-containing protein contains PF... 27 9.8
At1g05860.1 68414.m00613 expressed protein 27 9.8
>At5g22650.2 68418.m02647 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 223
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +2
Query: 182 TEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENG---DAEESNDASENGDATEK 352
T+PKA P + PA+ ++ + + DE+ ED +E G D ++S+D E E+
Sbjct: 53 TKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKGMDVDEDDSDDDEEEDSEDEE 112
Query: 353 KETGVKR 373
+E K+
Sbjct: 113 EEETPKK 119
Score = 28.3 bits (60), Expect = 5.6
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Frame = +2
Query: 158 VAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGT----DEAPEDSPAENGDAE---ES 316
++ + TS++ + P + PA A +NG D P+ PAE AE ES
Sbjct: 13 ISTDDFTSSDDEDVP-EAVPAPAPTAVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPES 71
Query: 317 NDASENGDATEKKETGVKRKSVALD 391
++ E+ D E +E K + +D
Sbjct: 72 DEEDESDDEDESEEDDDSEKGMDVD 96
>At5g22650.1 68418.m02646 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 306
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +2
Query: 182 TEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENG---DAEESNDASENGDATEK 352
T+PKA P + PA+ ++ + + DE+ ED +E G D ++S+D E E+
Sbjct: 136 TKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKGMDVDEDDSDDDEEEDSEDEE 195
Query: 353 KETGVKR 373
+E K+
Sbjct: 196 EEETPKK 202
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Frame = +2
Query: 158 VAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGT----DEAPEDSPAENGDAE---ES 316
+ + TS++ + P + PA A +NG D P+ PAE AE ES
Sbjct: 96 IEQDDFTSSDDEDVP-EAVPAPAPTAVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPES 154
Query: 317 NDASENGDATEKKETGVKRKSVALD 391
++ E+ D E +E K + +D
Sbjct: 155 DEEDESDDEDESEEDDDSEKGMDVD 179
>At4g36980.1 68417.m05240 expressed protein
Length = 560
Score = 36.7 bits (81), Expect = 0.016
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Frame = +2
Query: 143 VDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAES-NGKENGTDEAPEDSPAENGDAEE-- 313
++ + AP T T+P P V + + NGK+N D +D + D +E
Sbjct: 142 LEAKLAAPFLGTRTQPAQPPANKGTYSQVGFSYAGNGKDNSLDADEDDVDDDEDDEDEEE 201
Query: 314 ---SNDASENGDATEKKETGVKR 373
SND+ + G T K+ G+KR
Sbjct: 202 EFDSNDSDDEGMETIAKQFGIKR 224
>At1g44780.1 68414.m05130 expressed protein ; expression supported
by MPSS
Length = 471
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 251 KENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVAL 388
K E+ D P ++ + EESN+ +E G +E+K V++K++ L
Sbjct: 412 KVTAESESESDEPEDSENEEESNEKAERGSQSEEKRMMVEKKAIEL 457
>At2g35410.1 68415.m04340 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative similar to
SP|P19684 33 kDa ribonucleoprotein, chloroplast
precursor {Nicotiana sylvestris}; contains InterPro
entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 308
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 284 SPAENGDAEESNDASENGDATEKKET 361
S +E+GD+ E+N+ASE+GD E K T
Sbjct: 276 SESEDGDSVEANNASEDGDTVEDKNT 301
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKE 358
E + N +ENG DE E EN E N++ E+G+ E
Sbjct: 202 ENDDENTEENGNDEENEKEDEENSMEENGNESEESGNEDHSME 244
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPED-SPAENGDAEES------NDASENGDATEK 352
E + N +ENG DE +D + ENG+ EE+ N ENG+ +E+
Sbjct: 188 ENDDENTEENGNDEENDDENTEENGNDEENEKEDEENSMEENGNESEE 235
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 32.3 bits (70), Expect = 0.35
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 137 AAVDKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGK-ENGTDEAPEDSPAENGDAEE 313
A+ K+ + TS++ K+ PVK PAK + GK ++G+ P E+ E
Sbjct: 785 ASSKKKEEPSKATTSSKSKSGPVKSVPAK---SKTGKGKAKSGSASTPASKAKESASESE 841
Query: 314 SNDASENGDATEKKETGVKRKS 379
S + + + K ++G + S
Sbjct: 842 SEETPKEPEPATKAKSGKSQGS 863
>At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1055
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +2
Query: 179 STEPKASPVKXSPAKXVEAAESNGKENGTDE----APEDSPAENGDAEESNDASENGDAT 346
S+E + VK + + E E+ + +G+D+ A ++SP +G+A D E+ +
Sbjct: 12 SSEEEEERVKDNEEEDEEELEAVARSSGSDDDEVAAADESPVSDGEAAPVEDDYEDEEDE 71
Query: 347 EKKETGVKRKS 379
EK E + K+
Sbjct: 72 EKAEISKREKA 82
>At1g68030.1 68414.m07772 PHD finger protein-related contains low
similarity to PHD-finger domain proteins
Length = 314
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 212 SPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGD-ATEKKETGVKRKS 379
SP E S+GKEN P D P G EE S D +++ G + +S
Sbjct: 156 SPCSEEETLRSDGKENDRVTPPMDEPDLTGRTEEGESFSRGADELLDRRNAGFRYES 212
>At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to
SP|Q38858 Calreticulin 2 precursor {Arabidopsis
thaliana}
Length = 424
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSV 382
+AA ++ +E +D+PAE+ DAE+ + E GD ++ + + KSV
Sbjct: 359 KAAFDEAEKKNEEEESKDAPAES-DAEDEPEDDEGGDDSDSESKAEETKSV 408
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 31.9 bits (69), Expect = 0.46
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 239 ESNGKENGTDEAPEDSPAENGDAEES-NDASENGDATEKKETGVKRKS 379
E N K +GT+E+ + ENG EE+ SE + EKK+ G +S
Sbjct: 197 EENEK-SGTEESEVEERKENGGTEENEKSGSEESEVEEKKDNGGTEES 243
Score = 31.1 bits (67), Expect = 0.80
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 239 ESNGKENGTDEAPEDSPAENGDAEESNDAS--ENGDATEKKETGVKRKS 379
E N K +G++E+ + +NG EES + S E + EKK+ G +S
Sbjct: 219 EENEK-SGSEESEVEEKKDNGGTEESREKSGTEESEVEEKKDNGSSEES 266
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/65 (24%), Positives = 26/65 (40%)
Frame = +2
Query: 167 EXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDAT 346
E V + K V+ + K E + KEN + + E + EESN E
Sbjct: 635 ENVNTESEKKEQVEENEKKTDEDTSESSKENSVSDTEQKQSEETSEKEESNKNGETEVTQ 694
Query: 347 EKKET 361
E+ ++
Sbjct: 695 EQSDS 699
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 239 ESNGKENGTDEAPEDSPAENGDAEES-NDASENGDATEKKETG 364
E N K +GT+E+ + +NG EE+ +E + E+KE G
Sbjct: 175 EENEK-SGTEESEVEERKDNGGTEENEKSGTEESEVEERKENG 216
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 239 ESNGKENGTDEAPEDSPAENGDAEES-NDASENGDATEKKETG 364
E N K +GT+E+ + +NG EE+ +E + E+K+ G
Sbjct: 153 EENEK-SGTEESEVEERKDNGGTEENEKSGTEESEVEERKDNG 194
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 239 ESNGKENGTDEAPEDSPAENGDAEES--NDASENGDATEKKETGVK 370
E + +++GT+E+ + +NG +EES + EN E +E+ K
Sbjct: 241 EESREKSGTEESEVEEKKDNGSSEESEVEEKKENRGIDESEESKEK 286
>At1g01490.1 68414.m00065 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 177
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +2
Query: 164 PEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEE 313
PE EPK P K EA + GK+ G E+ E GD +E
Sbjct: 74 PEKEKKEEPKKEGGGEPPKKEGEAPKEEGKKEGEAPKKEEEKKEGGDKKE 123
>At4g08310.1 68417.m01372 expressed protein glutamic acid-rich
protein precursor - Plasmodium falciparum, PIR2:A54514
Length = 504
Score = 31.5 bits (68), Expect = 0.60
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 230 EAAESNGK--ENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRK 376
EA +S+ K + + +PA+N D+EE D S+ D E KE VK+K
Sbjct: 233 EATQSSTKAQRKPVSKKVKSTPAKNSDSEEMFD-SDGEDEEEDKEVAVKKK 282
>At4g01260.1 68417.m00166 hypothetical protein low similarity to
storekeeper protein [Solanum tuberosum] GI:14268476;
contains Pfam profile PF04504: Protein of unknown
function, DUF573
Length = 325
Score = 31.5 bits (68), Expect = 0.60
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +2
Query: 197 SPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRK 376
SPVK S K V ++ +G + T PE S A E++++ S+ E VK+K
Sbjct: 41 SPVKESSKKPVVVSKPSGSKTTTK--PESSTAAKRSFEKTDEMSKKKSKNSMGEEDVKKK 98
Query: 377 SVAL 388
L
Sbjct: 99 DETL 102
>At5g17690.1 68418.m02073 like heterochromatin protein (LHP1)
identical to like heterochromatin protein LHP1
[Arabidopsis thaliana] GI:15625407; contains Pfam
profile PF00385: 'chromo' (CHRromatin Organization
MOdifier)
Length = 445
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 269 EAPEDSPAENGDAEESNDASENGDATEKKETG 364
E +D P E+GD EE D E+ E+ E G
Sbjct: 60 EIGDDRPTEDGDEEEEEDEDEDDGGDEEDEEG 91
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Frame = +2
Query: 128 MAAAAVDKQXVAPEXVTSTEPK--ASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENG 301
++ A ++ V E V S + K +P + E GK NG +E + G
Sbjct: 112 VSGVATEEDAVMKESVESADNKDAENPEGEQEKESKEEKLEGGKANGNEEGDTEEKLVGG 171
Query: 302 DAEESNDASENGDATEK--KETGVKRKSVA 385
D + D +E + ++ KE +K K+ A
Sbjct: 172 DKGDDVDEAEKVENVDEDDKEEALKEKNEA 201
>At1g24190.1 68414.m03051 paired amphipathic helix repeat-containing
protein similar to transcription co-repressor Sin3
[Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 1353
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 364
E + +G E+G E PED N E +A DA + +E G
Sbjct: 992 ENGDVSGTESGGGEDPEDDLDNNNKGESEGEAECMADAHDAEENG 1036
>At5g11980.1 68418.m01401 conserved oligomeric Golgi complex
component-related / COG complex component-related
similar to SP|Q96MW5 Conserved oligomeric Golgi complex
component 8 {Homo sapiens}; contains Pfam profile
PF04124: Dor1-like family
Length = 569
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 173 VTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 325
+ + P SP K + + ENG PE+ AEN +A+E +++
Sbjct: 507 ILAASSSQEPSNKSP-KVISTDTKDASENGVASQPEEKQAENPNAKEEDNS 556
>At4g39040.2 68417.m05530 expressed protein contains PF01985:
Uncharacterised protein family
Length = 280
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +2
Query: 233 AAESNGKENGTDEAPEDSP---AENG--DAEESNDASENGDATEKKETGVKRKS 379
+AE E+ +E +DS +E G D+E S + SE GD EK E K+KS
Sbjct: 93 SAEEYEYEDEEEEDEQDSGVVVSERGIEDSEASEEVSEIGDKEEKTENTKKKKS 146
>At4g39040.1 68417.m05529 expressed protein contains PF01985:
Uncharacterised protein family
Length = 296
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +2
Query: 233 AAESNGKENGTDEAPEDSP---AENG--DAEESNDASENGDATEKKETGVKRKS 379
+AE E+ +E +DS +E G D+E S + SE GD EK E K+KS
Sbjct: 93 SAEEYEYEDEEEEDEQDSGVVVSERGIEDSEASEEVSEIGDKEEKTENTKKKKS 146
>At4g12610.1 68417.m01987 transcription initiation factor IIF alpha
subunit (TFIIF-alpha) family protein low similarity to
SP|Q05913 Transcription initiation factor IIF, alpha
subunit (TFIIF-alpha) (Transcription factor 5, large
chain) (TF5A) {Drosophila melanogaster}; contains Pfam
profile PF05793: Transcription initiation factor IIF,
alpha subunit (TFIIF-alpha)
Length = 543
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 248 GKENGTDEAPEDSPAENGDAEESN 319
GK NG DE+ ED ++ D EE+N
Sbjct: 349 GKANGLDESDEDDDDDSDDEEETN 372
>At3g60110.1 68416.m06712 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 438
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 167 EXVTSTEPKA-SPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDA 343
E + TE K + K S A ++ + N + G + ++ +G+ ++ ND + D
Sbjct: 312 EENSKTEKKTVADKKKSVADFLKRIKKNSPQKGKETTSKNQKKNDGNVKKENDHQKKSDG 371
Query: 344 TEKKE 358
KKE
Sbjct: 372 NVKKE 376
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 176 TSTEPKASPVKXSPAKXVEAAESN-GKENGTDEAPEDSPAENGDAEESNDASENGDATEK 352
T+T S + S V A ++ G+ + D+ E+ D + +D E TEK
Sbjct: 262 TATTSARSSRRTSKEIAVVAKDTKTGRAKNNIKKQTDTKTESSD--DDDDEKEENSKTEK 319
Query: 353 KETGVKRKSVA 385
K K+KSVA
Sbjct: 320 KTVADKKKSVA 330
>At1g59750.2 68414.m06728 auxin-responsive factor (ARF1) identical
to auxin response factor 1 GI:2245378 from [Arabidopsis
thaliana]
Length = 662
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +2
Query: 188 PKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKET 361
P + P+ PAK K G P A ES ++ N ++TEKK+T
Sbjct: 400 PSSVPLFSPPAKAATFGHGGNKSFGVSIGSAFWPTNADSAAESFASAFNNESTEKKQT 457
>At1g59750.1 68414.m06727 auxin-responsive factor (ARF1) identical
to auxin response factor 1 GI:2245378 from [Arabidopsis
thaliana]
Length = 665
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +2
Query: 188 PKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKET 361
P + P+ PAK K G P A ES ++ N ++TEKK+T
Sbjct: 403 PSSVPLFSPPAKAATFGHGGNKSFGVSIGSAFWPTNADSAAESFASAFNNESTEKKQT 460
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 179 STEPKASPVKXSPAKXVEAAESNGKENGTDEAPED-SPAENGDAEESNDASENGDATEKK 355
S + K + K +PA A+ S+ + +DE ED PA+ +++ S + +++E +
Sbjct: 195 SEDEKPATKKAAPAAAKAASSSDSSDEDSDEESEDEKPAQKKADTKASKKSSSDESSESE 254
Query: 356 E 358
E
Sbjct: 255 E 255
>At1g22450.1 68414.m02806 cytochrome c oxidase subunit 6b, putative
(COX6b) nearly identical to subunit 6b of cytochrome c
oxidase [Arabidopsis thaliana] GI:6518353
Length = 191
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 146 DKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAE 295
+K APE + + + + AAE N EN ++E E++P E
Sbjct: 67 EKSESAPESTEVASEAPAAAEDNAEETPAAAEENNDENASEEVAEETPDE 116
>At5g64030.1 68418.m08039 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 829
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 233 AAESNGKENGTDEAPEDSPAEN---GDAEESNDASENGDATEKKETGVKR 373
++E+ + G ++ +DS +EN GD +E D +N D E +T K+
Sbjct: 124 SSETKSETEGGEDQKDDSKSENGGGGDLDEKKDLKDNSD-EENPDTNEKQ 172
>At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profile:
PF00076 RNA recognition motif
Length = 636
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 176 TSTEPKASPVKXSPAKXVEA-AESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEK 352
+S++ + P+K A +A AES+ ++G+ E +PA+ D+S+ + E
Sbjct: 187 SSSDEETVPMKKQTAVLEKAKAESSSSDDGSSSDEEPTPAKKEPIVVKKDSSDESSSDE- 245
Query: 353 KETGVKRK 376
ET V +K
Sbjct: 246 -ETPVVKK 252
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 230 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRK 376
+AA ++ +E +D+PAE+ EE+ D GD ++ + + K
Sbjct: 359 KAAFDEAEKKREEEESKDAPAESDAEEEAEDDDNEGDDSDNESKSEETK 407
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +2
Query: 146 DKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 325
D++ T K+ +PAK + + T+E ++ A D+E +ND
Sbjct: 249 DQEKAKKRKSTPKRGKSGESSDTPAKRKRQTKKRDLPSDTEEGKDEGDA---DSEGTNDP 305
Query: 326 SENGDATEKKET 361
E DA ++E+
Sbjct: 306 HEEDDAAPEEES 317
>At5g52300.1 68418.m06491 low-temperature-responsive 65 kD protein
(LTI65) / desiccation-responsive protein 29B (RD29B)
nearly identical to SP|Q04980 Low-temperature-induced 65
kDa protein (Desiccation-responsive protein 29B)
{Arabidopsis thaliana}
Length = 619
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +2
Query: 206 KXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVA 385
K A E AES G+ TDE+P D + G E+ S D KKE+ + + S A
Sbjct: 259 KGGEAGVPEIAESLGRMKVTDESP-DQKSRQGREEDFPTRSHEFDL--KKESDINKNSPA 315
>At5g21430.1 68418.m02535 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile: PF00226
DnaJ domain;
Length = 218
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 197 SPVKXSPAKXVEAAESNGKENGTDEAPEDSPA 292
SP + S EA G DEAP++SP+
Sbjct: 44 SPARNSSEVSAEAETEGGSSTAVDEAPKESPS 75
>At3g18640.1 68416.m02368 zinc finger protein-related contains
similarity to zinc finger proteins (CCCH type)
Length = 676
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 8/71 (11%)
Frame = +2
Query: 188 PKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENG--------DAEESNDASENGDA 343
P + K S + ++ + KENG + E S E G DAE D E+GD
Sbjct: 520 PAVTASKISNVEEIQEVSLDPKENGDKKTDEASKEEEGKKTGEDTNDAENVVDEDEDGDD 579
Query: 344 TEKKETGVKRK 376
E K K
Sbjct: 580 DGSDEENKKEK 590
>At3g06670.1 68416.m00786 expressed protein
Length = 865
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/67 (23%), Positives = 34/67 (50%)
Frame = +2
Query: 179 STEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKE 358
S P S + AK E ++S+ +EN + + +++ ++G + ++ S+NG ++
Sbjct: 791 SPGPAGSAARSIVAKGAEDSKSS-EENNSSSSDDENHKDDGVSSSEHETSDNGKLNGEES 849
Query: 359 TGVKRKS 379
V KS
Sbjct: 850 LVVAPKS 856
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 28.7 bits (61), Expect = 4.3
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +2
Query: 146 DKQXVAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAP--EDSPAENGD-AEES 316
+K+ V PE T P SP + A +E AE+ T E P +D E GD AEE+
Sbjct: 1931 EKEEVQPE--TLATPTQSPSRMETA--MEEAET------TIETPVEDDKTDEGGDAAEEA 1980
Query: 317 NDASEN-GDATEKKETGVKRKSVA 385
D N D E ET +K ++ A
Sbjct: 1981 ADIPNNANDQQEAPETDIKPETSA 2004
>At1g15780.1 68414.m01893 expressed protein
Length = 1335
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 383 PQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYHS 255
PQ+SS + S L H+S M R QH QQA+ G+H+ S
Sbjct: 304 PQLSSQQTTQSMLRQHQSSMLR---QHPQSQQAS--GIHQQQS 341
>At3g17160.1 68416.m02189 expressed protein
Length = 165
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Frame = +2
Query: 248 GKENGTDEAPEDSPAENG-DAEESNDASENGDATE-------KKETGVKRKSVALD 391
G+ D+A + P ENG D EE ++ E D E K E KRK VA D
Sbjct: 93 GEVEDEDDASDFDPEENGLDEEEGDEEIEEDDVDEDISLSAGKSEPLSKRKRVAKD 148
>At2g25670.2 68415.m03077 expressed protein
Length = 318
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 227 VEAAESNGKENGTDEAPEDSPAENGDAEE-SNDASENGDATEKKETGVKRKSV 382
V E+NG E + E NG+ E+ N A A++KK+ K+K V
Sbjct: 180 VAPKENNGLEESQEAGQEKKEDVNGEGEKKENAAGGESKASKKKKKKDKQKEV 232
>At2g25670.1 68415.m03076 expressed protein
Length = 318
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 227 VEAAESNGKENGTDEAPEDSPAENGDAEE-SNDASENGDATEKKETGVKRKSV 382
V E+NG E + E NG+ E+ N A A++KK+ K+K V
Sbjct: 180 VAPKENNGLEESQEAGQEKKEDVNGEGEKKENAAGGESKASKKKKKKDKQKEV 232
>At2g03140.1 68415.m00267 CAAX amino terminal protease family
protein very low similarity to SP|Q40863 Late
embryogenesis abundant protein EMB8 from Picea glauca;
contains Pfam profile PF02517 CAAX amino terminal
protease family protein
Length = 1805
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 176 TSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPA--ENGDAEESNDASENGDATE 349
+ P ++ SP+K + +GK D +DSP E+ E+++ A ++ A+E
Sbjct: 709 SDNSPGGVELEHSPSKVSQRNSDSGKSQPVDNDQDDSPGNHESHTNEKTSAADDSEMASE 768
Query: 350 KKETGVKRKSVALD 391
K + + +
Sbjct: 769 AKSDSANQGPIGAE 782
>At1g30470.1 68414.m03724 SIT4 phosphatase-associated family protein
contains similarity to copper chaperone homolog CCH
GB:AAF15286 GI:6525011 from [Glycine max]; contains Pfam
profile PF04499: SIT4 phosphatase-associated protein
Length = 811
Score = 28.3 bits (60), Expect = 5.6
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +2
Query: 134 AAAVDKQXVAPEXVTSTEPKASPVKXSPAKX---VEAAESNGKENGTDEAPEDSPA-ENG 301
AA+ + E TS P +P + P K VE E++ PE++ NG
Sbjct: 633 AASSPPVDMETEDSTSKHPSENPSEPEPEKSPAWVEWRETSESTAPPSSNPEETTILSNG 692
Query: 302 DAEESNDASENGDATEKKETGVKRKSVALD 391
D + + +++ D T+ K + VK V D
Sbjct: 693 DVQIEKEDNDDDDDTDNK-SAVKTPGVPGD 721
>At5g63530.1 68418.m07974 copper chaperone (CCH)-related low
similarity to copper homeostasis factor [GI:3168840];
nearly identical to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 355
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 239 ESNGKENGTDEAPEDSPAENGD-AEESNDASENGDATEKKETGVKRK 376
ES G+E D+A D + GD + +A++NG E+ + RK
Sbjct: 266 ESKGEEGKDDKAKTDEEKKEGDGGKGEGEAADNGGGEEEGKVVEVRK 312
>At5g58280.1 68418.m07296 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 273
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 284 SPAENGDAEESNDASENGDATEKKETGVKRKSVAL 388
+P+E + EE D E+GD E KR SV L
Sbjct: 234 TPSEEEEEEEDKDVEESGD-EEHSSRATKRSSVRL 267
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +2
Query: 167 EXVTSTEPKASPVKXSPAKXVEA---AESNGKENGTDEAPEDSPAENGDAEESNDASENG 337
E T EP S K K E+ AE+ +E E+ E + E + +D E
Sbjct: 775 EEETQKEPSESTKKERKRKNPESKKKAEAVEEEETRKESVESTKKERKRKKPKHDEEEVP 834
Query: 338 DATEKKETGVKRK 376
+ TEK E K+K
Sbjct: 835 NETEKPEKKKKKK 847
>At5g16620.1 68418.m01946 hydroxyproline-rich glycoprotein family
protein contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 447
Score = 27.9 bits (59), Expect = 7.4
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Frame = +2
Query: 131 AAAAVDKQXVAPEXVTSTEPKASPVK----XSPAKXVEAAESNGKENGTDEAPED-SPAE 295
+ A VD E ST+PK +P K P+ +EA++ +E + A ED SP E
Sbjct: 185 SGATVDVTATKVETPPSTKPKPTPAKDIEVDKPSVVLEASKEKKEEK--NYAFEDISPEE 242
Query: 296 NGDAEESNDASENGDATEKKET 361
++ +E + KET
Sbjct: 243 TTKESPFSNYAEVSETNSPKET 264
>At5g14380.1 68418.m01680 hydroxyproline-rich glycoprotein family
protein identical to gi|4775268|emb|CAB42531
Length = 150
Score = 27.9 bits (59), Expect = 7.4
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Frame = +2
Query: 125 TMAAAAVDKQXVAPEXVTSTEPK----ASPVKXSPAKXVEAAE---SNGKENGTDEAPED 283
T A A K AP + PK +SP SPA E S + + EAP
Sbjct: 39 TKAPTATTKAPSAPTKAPAAAPKSSSASSPKASSPAAEGPVPEDDYSASSPSDSAEAPTV 98
Query: 284 S--PAENGDAEESNDASENGDATEKKETG 364
S PA D+ + D +G E ++G
Sbjct: 99 SSPPAPTPDSTSAADGPSDGPTAESPKSG 127
>At3g04470.1 68416.m00474 expressed protein
Length = 423
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +2
Query: 239 ESNGKENGTDEAPEDSPAENGDAEESNDASEN-----GDATEKKETGVKRKSVALD 391
E + G+ APED + G +++S+ S++ GDA + KE K+K VA D
Sbjct: 180 EDTKLKKGSKSAPEDGN-QKGKSQKSSMVSDHANEDHGDAKKGKEKKKKKKGVAGD 234
>At5g58000.1 68418.m07256 phosphatase-related weak similarity to CTD
phosphatase-like 3 [Arabidopsis thaliana] GI:22212705;
contains Pfam profiles PF02453: Reticulon, PF00533:
BRCA1 C Terminus (BRCT) domain, PF03031: NLI interacting
factor
Length = 1011
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +2
Query: 278 EDSPAENGDAE--ESNDASENGDATEKKETGVKRKSV 382
E+ +NGD E + +D E+GD E++E V++KSV
Sbjct: 222 ENEQIDNGDQEIGDQDDYEEDGDEEEERE--VEKKSV 256
>At5g10950.1 68418.m01271 cylicin-related low similarity to
SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos
taurus}
Length = 395
Score = 27.5 bits (58), Expect = 9.8
Identities = 25/81 (30%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Frame = +2
Query: 158 VAPEXVTSTEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDS---PAENGDAEESNDAS 328
VA EPK S A E E N E DEA + N D E+N +
Sbjct: 251 VAENSSDEDEPKVLKTNNSKADKDEDEEEN--ETSDDEAEPKALKLSNSNSDNGENNSSD 308
Query: 329 ENGDATEKKETGVKRKSVALD 391
+ + T K T K KS D
Sbjct: 309 DEKEITISKITSKKIKSNTAD 329
>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 986
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 254 ENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRK 376
E+G +E ++ GDA E + E T K ET ++ +
Sbjct: 467 EDGNEEKVSQESSKPGDASEETNEMEAEQKTPKLETAIEER 507
>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 983
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 254 ENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRK 376
E+G +E ++ GDA E + E T K ET ++ +
Sbjct: 467 EDGNEEKVSQESSKPGDASEETNEMEAEQKTPKLETAIEER 507
>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 254 ENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRK 376
E+G +E ++ GDA E + E T K ET ++ +
Sbjct: 467 EDGNEEKVSQESSKPGDASEETNEMEAEQKTPKLETAIEER 507
>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 254 ENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRK 376
E+G +E ++ GDA E + E T K ET ++ +
Sbjct: 467 EDGNEEKVSQESSKPGDASEETNEMEAEQKTPKLETAIEER 507
>At4g08880.1 68417.m01464 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At1g34730, At1g27790, At1g34740, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1463
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 248 GKENGTDEAPEDSPAENGDAEESNDASENGDATEKKE 358
G D P A+ D ++ND S+N A E KE
Sbjct: 708 GSVGTEDPNPGSDEADKTDIPKNNDESDNATAVEAKE 744
>At4g03300.1 68417.m00451 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790 , At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886
Length = 1285
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 248 GKENGTDEAPEDSPAENGDAEESNDASENGDATEKKE 358
G D P A+ D ++ND S+N A E KE
Sbjct: 924 GSVRTEDPNPGSDEADKTDIHKNNDESDNAAAVEAKE 960
>At2g16640.1 68415.m01910 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1206
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = +2
Query: 164 PEXVTS---TEPKASPVKXSPAKXVEAAESNGKENGTDEAPEDSPAENGDAEESNDASEN 334
PE V+S TE +++P PA+ ++ AP+ S + +E+
Sbjct: 429 PEVVSSVSPTESRSNPAALPPARPAGLGRASPLLEPASRAPQQSRVNGNGSHNQFQQAED 488
Query: 335 GDATEKKETGVKRKSVAL 388
TE E R+ + L
Sbjct: 489 STTTEADEHDETREKLQL 506
>At1g69030.1 68414.m07898 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 328
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 248 GKENGTDEAPEDSPAENGDA--EESNDASENGDATEKKETGVKR 373
G +DEAP+D ++G + ++ D N D E+KE+ +
Sbjct: 284 GDLEDSDEAPDDGDGDDGGSLGDDDFDKIGNSDVEEEKESNAAK 327
>At1g63750.1 68414.m07214 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1131
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Frame = +2
Query: 239 ESNGKENGTDEAPEDSPA-----ENGDAEESNDASENGDATEKKET 361
E+ G NG ED E+G+ ES SE D +E +ET
Sbjct: 1021 ETKGGNNGGSSDEEDGKIHMYSHESGETSESESESEKEDESEPRET 1066
>At1g47970.1 68414.m05343 expressed protein
Length = 198
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 251 KENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRK 376
+E+ +D PE++ E E +D ++N K E KRK
Sbjct: 136 EEDASDFEPEENGVEEDIDEGEDDENDNSGGAGKSEAPPKRK 177
>At1g35830.1 68414.m04452 VQ motif-containing protein contains
PF05678: VQ motif
Length = 302
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = -3
Query: 410 SFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYHSL 252
S LL LH S + L H+ + L H H Q L LH S+
Sbjct: 175 SSLLNLHHHTTTSMTFPDLPLPQTHQVSTFQSLLSHQHHHQPTLSSLHDLDSM 227
>At1g05860.1 68414.m00613 expressed protein
Length = 280
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 341 HHRSQMHRCFLQHHHFQQANLLGLHRYHS 255
H+ Q+ RC+ H+ +L HRY+S
Sbjct: 77 HNLKQLSRCYRDHYWALMEDLKAQHRYYS 105
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,538,546
Number of Sequences: 28952
Number of extensions: 192555
Number of successful extensions: 963
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -