Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_F13
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.2  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   5.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.8  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   9.8  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +1

Query: 169 YALPYTVVSIPHHL*YQI--PTSQDI 240
           Y+ PY +++ PH   YQI  P + +I
Sbjct: 428 YSGPYKIIAKPHPNTYQIADPVTNEI 453


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 526 FSEGYIIKDNIKISSTLN 473
           F E Y+I DNI I   L+
Sbjct: 16  FLEEYVIPDNIDIDDILS 33


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 125 FNRIGGVQQHVFTE 166
           FN +  VQQH F +
Sbjct: 101 FNSVRNVQQHTFAD 114


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 194 QYPIIYDIRSRPRKISSPTGSKDLQMVNIS 283
           +YP+I  +R   R IS    +KD+    I+
Sbjct: 444 KYPLIGAMREELRGISRGKNAKDVDWQKIA 473


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/40 (22%), Positives = 17/40 (42%)
 Frame = +1

Query: 88  GVYRGRRSSCHYVQQNRRSTTARIHRRYALPYTVVSIPHH 207
           G+Y     +  Y ++N++     I    +L    V +P H
Sbjct: 108 GIYEYIMRNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRH 147


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,610
Number of Sequences: 336
Number of extensions: 2948
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)