Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_F13
(571 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1322.16 |phb2||prohibitin Phb2|Schizosaccharomyces pombe|chr... 224 8e-60
SPAC1782.06c |||prohibitin Phb1|Schizosaccharomyces pombe|chr 1|... 211 6e-56
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 0.84
SPCC777.07 |||alpha-1,2-mannosyltransferase |Schizosaccharomyces... 28 0.84
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 26 3.4
SPCC1183.09c |pmp31|mug75|plasma membrane proteolipid Pmp31|Schi... 26 4.5
SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 7.8
SPBC106.19 ||SPBC582.01|sequence orphan|Schizosaccharomyces pomb... 25 7.8
SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyc... 25 7.8
>SPCC1322.16 |phb2||prohibitin Phb2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 279
Score = 224 bits (547), Expect = 8e-60
Identities = 106/162 (65%), Positives = 132/162 (81%)
Frame = +2
Query: 86 SVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSKDL 265
S+F V+GGHRAI ++RIGG++ ++ EG HF IPW + I YD+R++PR ISS TG+KDL
Sbjct: 35 SLFNVDGGHRAIKYSRIGGIKNLIYPEGTHFLIPWIETAIDYDVRAKPRNISSLTGTKDL 94
Query: 266 QMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQ 445
QMVNI+ RVLSRPD + L +YR LG DYDE+VLPSI NEVLKSVVA+FNASQLITQR++
Sbjct: 95 QMVNINCRVLSRPDVHALPKIYRTLGGDYDERVLPSIVNEVLKSVVAQFNASQLITQRER 154
Query: 446 VSLLIRRELVERAADFNIILDDVSLTELSFGKEYTAAVXAKQ 571
VS L+R L++RAA FNI+LDDVSLT + F E+TAAV AKQ
Sbjct: 155 VSRLVRENLMKRAARFNILLDDVSLTHVQFSPEFTAAVEAKQ 196
>SPAC1782.06c |||prohibitin Phb1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 282
Score = 211 bits (515), Expect = 6e-56
Identities = 97/162 (59%), Positives = 130/162 (80%)
Frame = +2
Query: 86 SVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSKDL 265
S++ V GG RA++F+R+ GVQ+ V EG HF IPW Q I+YD+R+RPR I++ TGSKDL
Sbjct: 25 SIYDVPGGKRAVLFDRLSGVQKQVVQEGTHFLIPWLQKAIVYDVRTRPRNIATTTGSKDL 84
Query: 266 QMVNISLRVLSRPDANMLATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQ 445
QMV+++LRVL RP+ ML +Y+ LG DYDE+VLPSI NE+LKSVVA+F+A++LITQR+
Sbjct: 85 QMVSLTLRVLHRPEVGMLPQIYQNLGLDYDERVLPSIGNEILKSVVAQFDAAELITQREV 144
Query: 446 VSLLIRRELVERAADFNIILDDVSLTELSFGKEYTAAVXAKQ 571
VS IR+ELV+RA +F I L+DVS+T ++FGKE+T AV KQ
Sbjct: 145 VSAKIRQELVQRATEFGIRLEDVSITHMTFGKEFTKAVERKQ 186
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.3 bits (60), Expect = 0.84
Identities = 24/92 (26%), Positives = 42/92 (45%)
Frame = -2
Query: 534 KLSSVRDTSSRIILKSAARSTNSLLISRDTC*RCVISWEALNLATTDFRTSLHIDGKTFS 355
++SS + S I +++ + +S +IS S +++DF +S+ S
Sbjct: 506 EVSSTLLSGSSAIPSTSSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGIS 565
Query: 354 S*SVPSCLYIVASILASGRESTRREMFTICKS 259
S S+PS V+SIL+S S +I S
Sbjct: 566 SSSIPSTFSSVSSILSSSTSSPSSTSLSISSS 597
>SPCC777.07 |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 378
Score = 28.3 bits (60), Expect = 0.84
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +2
Query: 146 QQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSKD 262
Q H F + ++ +PW+ P + R + PTG+ D
Sbjct: 324 QIHYFEDFGYYHLPWYHCPTDVQSHATARCLCDPTGTID 362
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 26.2 bits (55), Expect = 3.4
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +2
Query: 254 SKDLQMVNISLRVLSRPDANML--ATMYRQLGTDYDEKVLPSICNEVLKSVV 403
S DLQM ++ ++ L ++ L T+Y + +DY+ V S+C E+L +
Sbjct: 1252 SNDLQMESVCMKFLREKLSHELKELTVYYMVESDYEPDV--SLCPELLSLAI 1301
>SPCC1183.09c |pmp31|mug75|plasma membrane proteolipid
Pmp31|Schizosaccharomyces pombe|chr 3|||Manual
Length = 105
Score = 25.8 bits (54), Expect = 4.5
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 150 STYSPKVCTSVYRGFNTPSFMISDPDLARYLPRLVQKIYRW*TFPSEYFLD 302
S + P + + RGF T F+I+ A +P ++ IY +P LD
Sbjct: 15 SFFVPFIVVGIRRGFCTADFLINICLCALGIPGIIHAIYIVIKYPRTVRLD 65
>SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 515
Score = 25.0 bits (52), Expect = 7.8
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 324 QCTDNLEQIMMKRFCHLYAMKS*NRLLLNSMPPS*SH 434
Q DN++ I ++ FC + + + L+ SMP + H
Sbjct: 307 QIPDNIKHIELQCFCKVIVAQKLSETLVESMPFTYKH 343
>SPBC106.19 ||SPBC582.01|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 515
Score = 25.0 bits (52), Expect = 7.8
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 366 KTFSS*SVPSCLYIVASILASGRESTRREMFTICKSFEPVGEDIL 232
KTF+S PS I S+ R T+ ++F + +SF+ +G + L
Sbjct: 453 KTFASKIKPSHNIISFSLSLVKRFGTKNDLFFLRRSFKNMGIETL 497
>SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 489
Score = 25.0 bits (52), Expect = 7.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 78 SPNRCLPWKEVIVPLCSTE*EEYNST 155
SP+ LP+K ++P+ T EE NS+
Sbjct: 259 SPSPSLPFKTPLLPVTKTPLEEANSS 284
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,295,916
Number of Sequences: 5004
Number of extensions: 49442
Number of successful extensions: 136
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 242064240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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