Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_F11
(829 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 241 6e-64
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 199 3e-51
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 184 6e-47
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 54 2e-07
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 53 2e-07
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 52 7e-07
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 50 3e-06
07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726... 35 0.091
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264... 35 0.091
11_01_0321 + 2415799-2415972,2418060-2418351,2418757-2419610 32 0.64
08_01_0207 - 1647168-1647251,1647583-1647726,1648176-1648287,164... 30 2.0
12_01_0442 + 3495333-3496484 29 4.5
01_01_0571 - 4233769-4234239,4234340-4234378,4234712-4234839,423... 29 4.5
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 29 6.0
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 241 bits (589), Expect = 6e-64
Identities = 115/223 (51%), Positives = 151/223 (67%)
Frame = +2
Query: 125 LVHPLFXQRPKHFAIGQGIQPTRALSSFVSWPKYIRIQRQXAVLQRRLKVPPPINQFTQX 304
+ +PLF +RPK F IG + P + L FV WPK +RIQRQ +L++RLKVPP +NQFT+
Sbjct: 20 VTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRT 79
Query: 305 LDKXTAKGLFKXLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKL 484
LDK A LFK L +P ++ G N VT L
Sbjct: 80 LDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVEAK-KPIVVKYGLNHVTYL 138
Query: 485 VEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTN 664
+E+ KAQLVVIAHDVDPIELV++LPALCRKM VPYCIVKGK+RLG++VH+KT + L LT
Sbjct: 139 IEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVLCLTT 198
Query: 665 VESGDRASFSKVVEAIKTNFNERYEELRKHWGGGVLGNKSNAR 793
V++ D+ FSK++EAIK NFN++++E+RK WGGGV+G+KS A+
Sbjct: 199 VKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAK 241
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 199 bits (485), Expect = 3e-51
Identities = 103/223 (46%), Positives = 137/223 (61%)
Frame = +2
Query: 125 LVHPLFXQRPKHFAIGQGIQPTRALSSFVSWPKYIRIQRQXAVLQRRLKVPPPINQFTQX 304
+ +PLF +RPK F IG + P + L FV WPK +RIQRQ +L++RLKVPP +NQFT+
Sbjct: 4 VTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRT 63
Query: 305 LDKXTAKGLFKXLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKL 484
LDK A LFK L +P ++ G N VT L
Sbjct: 64 LDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTVEAK-KPIVVKYGLNHVTYL 122
Query: 485 VEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTN 664
+E+ KAQLVVIAHDVDPIELV++LPALCRKM +VH+KT + L LT
Sbjct: 123 IEQSKAQLVVIAHDVDPIELVVWLPALCRKM--------------EIVHKKTASVLCLTT 168
Query: 665 VESGDRASFSKVVEAIKTNFNERYEELRKHWGGGVLGNKSNAR 793
V++ D+ FSK++EAIK NFN++++E+RK WGGGV+G+KS A+
Sbjct: 169 VKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAK 211
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 184 bits (449), Expect = 6e-47
Identities = 98/222 (44%), Positives = 139/222 (62%)
Frame = +2
Query: 128 VHPLFXQRPKHFAIGQGIQPTRALSSFVSWPKYIRIQRQXAVLQRRLKVPPPINQFTQXL 307
V+PLF +RPK F IG + P + L FV WPK +R +QR+ +V + L
Sbjct: 22 VNPLFEKRPKQFGIGGALPPRKDLHRFVRWPKAVR-------IQRQRRVLKQRLKVPPAL 74
Query: 308 DKXTAKGLFKXLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLV 487
++ T + L K L +P ++ G + VT L+
Sbjct: 75 NQFT-RTLDKNLGCQKERLLKRAQAEAEGKTVEAK---------KPIVVKYGLDHVTYLI 124
Query: 488 EKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNV 667
E+ KAQLVVIAHDVDPIELV++LPALCRKM +PYCIVKGK+RLG++VH+KT + L LT V
Sbjct: 125 EQSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTTV 184
Query: 668 ESGDRASFSKVVEAIKTNFNERYEELRKHWGGGVLGNKSNAR 793
++ D+ FSK++EAIK+NFN++++E+RK WGGG++G+KS A+
Sbjct: 185 KNEDKLEFSKILEAIKSNFNDKFDEVRKKWGGGIMGSKSQAK 226
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +2
Query: 452 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL--GAL 625
++ G V K + + + L +IA ++ PI+++ +P LC + +PY V K L
Sbjct: 45 LKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLATAGT 104
Query: 626 VHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEELRKHWGG 763
R TC L LT G+ V E +KT++++ E+ + G
Sbjct: 105 TKRPTCCVLVLTKPAKGELE--EDVKEKLKTDYDQVMSEVAEAGNG 148
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +2
Query: 452 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL-- 625
++ G N TK + + A+ VV+A D +P+E++L LP L VPY V K LG
Sbjct: 33 LKKGANEATKTLNRGIAEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 92
Query: 626 VHRKTCTCLALTNVESGDRASFSKVVEAIK 715
V R C +N S R + + AI+
Sbjct: 93 VTRPVIACSVTSNEASNLRDPINNLKVAIE 122
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 51.6 bits (118), Expect = 7e-07
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +2
Query: 452 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL-- 625
++ G N TK + + ++ VV+A D +P+E++L LP L VPY V K LG
Sbjct: 35 LKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACG 94
Query: 626 VHRKTCTCLALTNVESGDRASFSKVVEAIK 715
V R C +N S + + +AI+
Sbjct: 95 VTRPVIACSVTSNEGSQLKTPIQNLKDAIE 124
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/98 (25%), Positives = 45/98 (45%)
Frame = +2
Query: 452 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVH 631
++ G V K + + L VIA ++ PI+++ +P LC + +PY V K L
Sbjct: 45 LKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYVPSKEDLATAGT 104
Query: 632 RKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEEL 745
K TC L + +V E +K++++ E+
Sbjct: 105 TKRPTCCVLVMTKPAKGEINEEVKEKLKSDYDHVVAEV 142
>07_01_0875 -
7265529-7265588,7265681-7265746,7266008-7266293,
7267138-7267142
Length = 138
Score = 34.7 bits (76), Expect = 0.091
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +2
Query: 461 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 619
G K +EK AQL V+A D D + V + ALC + V V LG
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 93
>07_01_0360 +
2646279-2646283,2647113-2647398,2648043-2648108,
2648199-2648258
Length = 138
Score = 34.7 bits (76), Expect = 0.091
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +2
Query: 461 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 619
G K +EK AQL V+A D D + V + ALC + V V LG
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 93
>11_01_0321 + 2415799-2415972,2418060-2418351,2418757-2419610
Length = 439
Score = 31.9 bits (69), Expect = 0.64
Identities = 23/80 (28%), Positives = 34/80 (42%)
Frame = -2
Query: 819 ALAFXSLAMRALDLLPRTPPPQCLRSSS*RSLKFVLMASTTFEKEARSPDSTFVRAKHVH 640
ALAF L + A LL PP + S R ++ + + R P+ + A
Sbjct: 9 ALAFF-LLVAAASLLSLPPPSLAVTSPYVRPKPRATLSLLKDDDDGRKPEQVHISAVGSD 67
Query: 639 VLRCTSAPRRDLPLTMQYGT 580
+R T D P T++YGT
Sbjct: 68 KMRVTWITGGDAPATVEYGT 87
>08_01_0207 -
1647168-1647251,1647583-1647726,1648176-1648287,
1648392-1648573,1648649-1648780,1648900-1649856,
1649949-1650734
Length = 798
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 69 RASSRRRPIGGQKGCAQVISCILSSXSGQSTLPLVRAFSQLVPC 200
R+ +RR +GG KGCAQ S I+ + + L A + + C
Sbjct: 393 RSPTRRHSLGGPKGCAQEFS-IVKRRQSDTFICLPEATDEAISC 435
>12_01_0442 + 3495333-3496484
Length = 383
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 187 NSCLVQLCKLAQVYPHPAPXGCTSASSESAPSDQPIY 297
N+C V+L + + H AP T+ ++ ++P D PI+
Sbjct: 143 NACGVRLRAVGSLPEHRAPAARTTTAAPASPPDSPIW 179
>01_01_0571 -
4233769-4234239,4234340-4234378,4234712-4234839,
4235329-4235470,4235519-4235905,4236045-4236230,
4236382-4236659,4236757-4236883,4237270-4237442,
4237610-4237657,4237734-4237767,4237837-4237965,
4238865-4238960,4239419-4239485,4240030-4240085,
4240522-4240617,4241127-4242222,4243221-4243402
Length = 1244
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1
Query: 310 VQXLGKLVDRRGHFQTTLKYSLLALDADILGPAYKAGQGTSWLNALTNGKVL 155
V + L+D RG+F+ + L AL++ + A G +AL NG+VL
Sbjct: 619 VSEIQTLIDSRGYFKASTSSWLSALNSSVNKDAVICALGGLLEDALKNGEVL 670
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 229 PHPAPXGCTSASSESAPSDQP 291
P PAP +A+ E+APSD P
Sbjct: 53 PQPAPEEAPAAAEEAAPSDDP 73
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,764,977
Number of Sequences: 37544
Number of extensions: 388054
Number of successful extensions: 1238
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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