Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_F09
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   4.0  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.3  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   9.3  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 639 LSDPGLEPNPPSKFMQLSTN 580
           L +PGL  NPP    QL  N
Sbjct: 191 LQNPGLNLNPPVTQTQLPLN 210


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 386 VPVQHLMCIVCVDHVRC*PRYLH 318
           +PV H+    C DH    PR+ H
Sbjct: 241 IPVGHIPIRQCDDHRDRPPRHFH 263


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 79  KRHFKFLFYCNVH*IKSYNVL 17
           KR F    YCN    KSYN+L
Sbjct: 77  KRQF-ICKYCNRQFTKSYNLL 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,445
Number of Sequences: 336
Number of extensions: 3621
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)