Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_F08
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    25   0.44 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    24   1.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.1  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   5.5  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   7.2  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 180 GVNRVYIFLGLVAFTGLYLVFGFGAELICN 269
           GV ++YIF G +  +G+    G+    IC+
Sbjct: 86  GVVQIYIFSGFIVPSGVVYKIGYWLHQICH 115


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 474 EYNGSLVIYYRIIRPYYQKHHG 539
           E N ++ +   +I P+Y  HHG
Sbjct: 11  EQNNNVPVVLDVIPPHYNIHHG 32


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 461 LPAD*IQRVPGDLLPYHSSLLPEAP 535
           LP+D  +  P  L+P H  L P  P
Sbjct: 217 LPSDFYRFSPTGLIPPHPGLSPHPP 241


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 461 LPAD*IQRVPGDLLPYHSSLLPEAP 535
           LP+D  +  P  L+P H  L P  P
Sbjct: 109 LPSDFYRFSPTGLIPPHPGLSPHPP 133


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 481 TGPW*STTVSFVLTTRSTMVVSMIWPTQIP*M 576
           +G +    + F  TTR  M+V M+  T+ P M
Sbjct: 293 SGDYNHVPMIFGYTTREGMIVEMMRKTETPGM 324


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -1

Query: 445 MHFNSQYNGNQPTMKSEKYSTIEKQAYTTQY 353
           MHF +QY  NQ      K++    Q     Y
Sbjct: 282 MHFPNQYQMNQEYRTDRKHTQQHYQMNQNMY 312


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -1

Query: 445 MHFNSQYNGNQPTMKSEKYSTIEKQAYTTQY 353
           MHF +QY  NQ      K++    Q     Y
Sbjct: 230 MHFPNQYQMNQEYRTDRKHTQQHYQMNQNMY 260


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -1

Query: 445 MHFNSQYNGNQPTMKSEKYSTIEKQAYTTQY 353
           MHF +QY  NQ      K++    Q     Y
Sbjct: 413 MHFPNQYQMNQEYRTDRKHTQQHYQMNQNMY 443


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,394
Number of Sequences: 336
Number of extensions: 3423
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)