BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_F_F08 (694 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC024201-6|AAF36016.1| 183|Caenorhabditis elegans Hypothetical ... 162 2e-40 Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical pr... 128 5e-30 AF045646-11|AAK29829.1| 205|Caenorhabditis elegans Hypothetical... 114 5e-26 U28412-5|AAC46595.1| 229|Caenorhabditis elegans Hypothetical pr... 79 2e-15 AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical ... 56 2e-08 AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical ... 42 3e-04 AF077541-5|AAC64629.1| 380|Caenorhabditis elegans Hypothetical ... 36 0.021 L16559-7|AAA27930.1| 161|Caenorhabditis elegans Hypothetical pr... 34 0.084 AF016678-11|AAB66147.1| 343|Caenorhabditis elegans Serpentine r... 31 0.59 Z83128-7|CAB05634.2| 243|Caenorhabditis elegans Hypothetical pr... 31 0.78 AF016678-7|AAB66154.3| 340|Caenorhabditis elegans Serpentine re... 30 1.4 Z48583-1|CAA88470.1| 389|Caenorhabditis elegans Hypothetical pr... 30 1.8 U97403-3|AAB52473.1| 142|Caenorhabditis elegans Hypothetical pr... 30 1.8 AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm rec... 29 2.4 AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical ... 28 7.3 AL110500-22|CAB60434.1| 1628|Caenorhabditis elegans Hypothetical... 28 7.3 AL032650-3|CAA21704.2| 1628|Caenorhabditis elegans Hypothetical ... 28 7.3 Z81137-10|CAB03470.2| 232|Caenorhabditis elegans Hypothetical p... 27 9.6 >AC024201-6|AAF36016.1| 183|Caenorhabditis elegans Hypothetical protein Y71F9B.3 protein. Length = 183 Score = 162 bits (393), Expect = 2e-40 Identities = 69/134 (51%), Positives = 97/134 (72%) Frame = +3 Query: 147 TXYFELAEQKVGVNRVYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQ 326 T EQK GV R+++ LG+V LYL+FG A+L+CN +GFVYPAYMS+KA+ES Sbjct: 25 TNVLATVEQKTGVKRLHLVLGVVGLQALYLIFGHSAQLVCNFMGFVYPAYMSIKAIESSN 84 Query: 327 KDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYR 506 K+DDT+WLTYWV++A S+VE+FS IV FP+YWL K IF+++ YLP+ + G+ +Y+R Sbjct: 85 KEDDTQWLTYWVIFAILSVVEFFSVQIVAVFPVYWLFKSIFLLYLYLPS-FLGAAKLYHR 143 Query: 507 IIRPYYQKHHGRID 548 ++P +H G ID Sbjct: 144 FVKPVAARHSGSID 157 >Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical protein T03F6.6 protein. Length = 295 Score = 128 bits (308), Expect = 5e-30 Identities = 52/118 (44%), Positives = 80/118 (67%) Frame = +3 Query: 168 EQKVGVNRVYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKW 347 E G+ R + GL+ +Y++ G GAE +CN IG YPAY+S+KA+ + DDDT W Sbjct: 49 EDATGLKREMLAYGLIGLNCVYMIIGSGAEFVCNLIGVAYPAYVSVKAIRTEGTDDDTMW 108 Query: 348 LTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPY 521 L YW V+ FSI+++F+ I+ +FP+YW+ K F+++ YLP E +GS VIY+++I P+ Sbjct: 109 LIYWTVFGAFSIIDFFAASIMSYFPIYWVAKAAFLLYLYLP-ETHGSHVIYHQLIDPF 165 >AF045646-11|AAK29829.1| 205|Caenorhabditis elegans Hypothetical protein F56B3.6 protein. Length = 205 Score = 114 bits (275), Expect = 5e-26 Identities = 51/108 (47%), Positives = 71/108 (65%) Frame = +3 Query: 195 YIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYAC 374 Y GL+AF +LVFG A L+CN IGF YP Y S+KA+ SP DDDT WL YW +A Sbjct: 84 YAAFGLIAF---FLVFGSVARLLCNLIGFGYPTYASVKAIRSPGGDDDTVWLIYWTCFAV 140 Query: 375 FSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRP 518 +V++FS+ I+ WFP Y++ K F+++ YLP + GS++ Y I+ P Sbjct: 141 LYLVDFFSEAILSWFPFYYIAKACFLVYLYLP-QTQGSVMFYETIVDP 187 >U28412-5|AAC46595.1| 229|Caenorhabditis elegans Hypothetical protein T19C3.4 protein. Length = 229 Score = 79.4 bits (187), Expect = 2e-15 Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 4/122 (3%) Frame = +3 Query: 252 AELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVG-WFPLY 428 + L+ + G +YPAY S KA+ + + KW+ YW+V+A +S +E D ++ WFP Y Sbjct: 6 SRLLIITAGTLYPAYRSYKAVRTKDTREYVKWMMYWIVFAIYSFLENLLDLVLAFWFPFY 65 Query: 429 WLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID---DMANTDPMNDIIKDLNE 599 + LK +F+ W P G+ ++Y + + P +H ID + A ++ N +++ ++ Sbjct: 66 FQLKIVFIFWLLSPWT-KGASILYRKWVHPTLNRHEKDIDALLESAKSESYNQLMRIGSK 124 Query: 600 SI 605 S+ Sbjct: 125 SL 126 >AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical protein Y110A2AR.1 protein. Length = 251 Score = 56.4 bits (130), Expect = 2e-08 Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 2/106 (1%) Frame = +3 Query: 246 FGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYF-SDFIVGWF- 419 F A + N IG V P S K L+ P K + + YW +Y F IV++F S F V F Sbjct: 3 FLARGLSNLIGIVAPVIGSFKVLKKPTKPRLIECMHYWTIYGSFLIVDWFLSTFYVSCFI 62 Query: 420 PLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMA 557 P Y F + +P + V+Y + + P+ +K+ RID+++ Sbjct: 63 PFYDFFILTFTVLMAIP-HIGFASVLYTKFLAPFLRKYERRIDNIS 107 >AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical protein Y48B6A.5 protein. Length = 424 Score = 42.3 bits (95), Expect = 3e-04 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Frame = +3 Query: 198 IFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQ--KDDDTKWLTYWVVYA 371 IF+ + LYL+ G A+++C ++ V PA S K L +P+ K+ L YW +Y Sbjct: 74 IFVMTMISVALYLIEGEHAQVVCTALTSVPPAIFSYKVLMNPKSSKEGYHSILFYWTLYG 133 Query: 372 CFSIVEYF 395 ++++ F Sbjct: 134 ILAVIDQF 141 >AF077541-5|AAC64629.1| 380|Caenorhabditis elegans Hypothetical protein Y23H5A.4 protein. Length = 380 Score = 36.3 bits (80), Expect = 0.021 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 2/94 (2%) Frame = +3 Query: 168 EQKVGVNRVYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDD--T 341 E VG + I L LYL+ G A+ IC ++ V PA S + L + D Sbjct: 52 EGLVGTKELVILSALTMC--LYLINGEYAQTICTALTSVPPALFSYRVLTNQMTDKQGYH 109 Query: 342 KWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKC 443 L YW +Y ++++ F+ G Y L KC Sbjct: 110 SILFYWTLYGLTALIDQFAGTAQG----YNLCKC 139 >L16559-7|AAA27930.1| 161|Caenorhabditis elegans Hypothetical protein C06E1.1 protein. Length = 161 Score = 34.3 bits (75), Expect = 0.084 Identities = 22/79 (27%), Positives = 34/79 (43%) Frame = +3 Query: 156 FELAEQKVGVNRVYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDD 335 F AE+ G+ R I +Y++ G L + I +P S L QK+ Sbjct: 29 FTQAEKFSGIPRERIVSMAFLMLSIYVLLGNFLPLFSHIICIFWPVKESFMILRQ-QKNP 87 Query: 336 DTKWLTYWVVYACFSIVEY 392 L YW++YA S+ +Y Sbjct: 88 SDNILLYWILYAMVSLFDY 106 >AF016678-11|AAB66147.1| 343|Caenorhabditis elegans Serpentine receptor, class i protein46 protein. Length = 343 Score = 31.5 bits (68), Expect = 0.59 Identities = 22/114 (19%), Positives = 51/114 (44%) Frame = +3 Query: 204 LGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSI 383 +G++ FTG+++VF A +++ + A ++ A ++ K L + +C + Sbjct: 209 VGVMGFTGIFVVFQAIAMTTMDTMKMLKGARKTISAQSYDRQRSAMKSLIAQFLASCLLV 268 Query: 384 VEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRI 545 + S +++ +P+ + + + + T + + VI PY GRI Sbjct: 269 LPAASFYVISVYPINYGQEIVNISMAIFATRSSVNAVILVATTPPYRAFLFGRI 322 >Z83128-7|CAB05634.2| 243|Caenorhabditis elegans Hypothetical protein W01D2.3 protein. Length = 243 Score = 31.1 bits (67), Expect = 0.78 Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 8/110 (7%) Frame = +3 Query: 156 FELAEQKVGVNRVYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDD 335 F E+ G R + F G + ++ I + + P +M++ A+ S + Sbjct: 88 FREIERVFGRRREHCFYGALGVLLTLVLLNDAVGAITAFMTLIIPTFMTVTAISSTSSYE 147 Query: 336 DTKWLT--------YWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWC 461 + +L YW VYA F E F ++ W L + IF+ C Sbjct: 148 NPSFLKNHQDFFVRYWTVYAVFVTGESFLSSLIHWD--LRLFRLIFMSMC 195 >AF016678-7|AAB66154.3| 340|Caenorhabditis elegans Serpentine receptor, class i protein45 protein. Length = 340 Score = 30.3 bits (65), Expect = 1.4 Identities = 28/138 (20%), Positives = 60/138 (43%), Gaps = 1/138 (0%) Frame = +3 Query: 192 VYIFL-GLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVY 368 +Y+FL G+ F G++ VF A +++ + A ++ A ++ + LT + Sbjct: 204 IYMFLVGVCGFLGIFGVFQVIAMTTVDTMKMLKGARRTISAQSYNRQKSALRSLTAQFLA 263 Query: 369 ACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 548 + ++ S F++ +P+ + I V T + + VI PY GR+ Sbjct: 264 STLMVLPASSFFVIMTYPIKYGQDIINVSMAIFATRSSVNAVILVVTTPPYRAFLFGRV- 322 Query: 549 DMANTDPMNDIIKDLNES 602 M+N + ++ +N + Sbjct: 323 -MSNRQKPSTVVVSINHT 339 >Z48583-1|CAA88470.1| 389|Caenorhabditis elegans Hypothetical protein F54B3.2 protein. Length = 389 Score = 29.9 bits (64), Expect = 1.8 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Frame = +2 Query: 386 GVLFRFHRRLVSIVLAVKVHLRDLVLPAD*IQRVPGDLLPYHSS--LLPEAPWSYR*YGQ 559 GV F FHRR S+V ++ + + +L + L+PY + LP A W YR G+ Sbjct: 182 GVQFEFHRR--SVVSKIQKTI-EFMLKLNNQTSTYSQLIPYWNPTIFLPPASWQYRKLGE 238 Query: 560 HR 565 + Sbjct: 239 EK 240 >U97403-3|AAB52473.1| 142|Caenorhabditis elegans Hypothetical protein T10E9.6 protein. Length = 142 Score = 29.9 bits (64), Expect = 1.8 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +3 Query: 354 YWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLP 470 YW ++ F Y D I+ + PLY+++K I +LP Sbjct: 91 YWTIFGFF----YLFDRILEYIPLYYIIKLAVFIGLFLP 125 >AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm receptor protein 28 protein. Length = 338 Score = 29.5 bits (63), Expect = 2.4 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Frame = +3 Query: 357 WVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV--IWCY 464 ++ AC +S GW +YWLL C+ + +W Y Sbjct: 110 FIYRACVLARPIWSKIFDGWKLIYWLLYCLIIGGLWSY 147 >AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical protein Y67H2A.1 protein. Length = 707 Score = 27.9 bits (59), Expect = 7.3 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = -1 Query: 319 DSRAFIDMYAGYTKPIELHINSAPKPNTKYKPVNATKPK 203 DS DMYA LH + P P+ KY P N++ P+ Sbjct: 581 DSNPVYDMYADSVVAAILHAQANPVPD-KYLPSNSSFPQ 618 >AL110500-22|CAB60434.1| 1628|Caenorhabditis elegans Hypothetical protein Y6B3A.1a protein. Length = 1628 Score = 27.9 bits (59), Expect = 7.3 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +3 Query: 411 GWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHG 539 GWFP+++ L CI + C L SL + + I+ KHHG Sbjct: 1221 GWFPIFFELSCI-INRCKLDVR-TRSLTVMFEIM-----KHHG 1256 >AL032650-3|CAA21704.2| 1628|Caenorhabditis elegans Hypothetical protein Y6B3A.1a protein. Length = 1628 Score = 27.9 bits (59), Expect = 7.3 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +3 Query: 411 GWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHG 539 GWFP+++ L CI + C L SL + + I+ KHHG Sbjct: 1221 GWFPIFFELSCI-INRCKLDVR-TRSLTVMFEIM-----KHHG 1256 >Z81137-10|CAB03470.2| 232|Caenorhabditis elegans Hypothetical protein W02D9.2 protein. Length = 232 Score = 27.5 bits (58), Expect = 9.6 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +3 Query: 246 FGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEY 392 F L+ SIGFV+ Y SM L Q D + L + V+ + +V + Sbjct: 179 FPLRLLITSIGFVWSTYASMGFLAGCQ-PDKKRLLVIYPVFLFYFVVSW 226 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,119,613 Number of Sequences: 27780 Number of extensions: 325514 Number of successful extensions: 1060 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 983 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1056 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1592382278 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -