Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_F08
(694 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024201-6|AAF36016.1| 183|Caenorhabditis elegans Hypothetical ... 162 2e-40
Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical pr... 128 5e-30
AF045646-11|AAK29829.1| 205|Caenorhabditis elegans Hypothetical... 114 5e-26
U28412-5|AAC46595.1| 229|Caenorhabditis elegans Hypothetical pr... 79 2e-15
AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical ... 56 2e-08
AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical ... 42 3e-04
AF077541-5|AAC64629.1| 380|Caenorhabditis elegans Hypothetical ... 36 0.021
L16559-7|AAA27930.1| 161|Caenorhabditis elegans Hypothetical pr... 34 0.084
AF016678-11|AAB66147.1| 343|Caenorhabditis elegans Serpentine r... 31 0.59
Z83128-7|CAB05634.2| 243|Caenorhabditis elegans Hypothetical pr... 31 0.78
AF016678-7|AAB66154.3| 340|Caenorhabditis elegans Serpentine re... 30 1.4
Z48583-1|CAA88470.1| 389|Caenorhabditis elegans Hypothetical pr... 30 1.8
U97403-3|AAB52473.1| 142|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm rec... 29 2.4
AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical ... 28 7.3
AL110500-22|CAB60434.1| 1628|Caenorhabditis elegans Hypothetical... 28 7.3
AL032650-3|CAA21704.2| 1628|Caenorhabditis elegans Hypothetical ... 28 7.3
Z81137-10|CAB03470.2| 232|Caenorhabditis elegans Hypothetical p... 27 9.6
>AC024201-6|AAF36016.1| 183|Caenorhabditis elegans Hypothetical
protein Y71F9B.3 protein.
Length = 183
Score = 162 bits (393), Expect = 2e-40
Identities = 69/134 (51%), Positives = 97/134 (72%)
Frame = +3
Query: 147 TXYFELAEQKVGVNRVYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQ 326
T EQK GV R+++ LG+V LYL+FG A+L+CN +GFVYPAYMS+KA+ES
Sbjct: 25 TNVLATVEQKTGVKRLHLVLGVVGLQALYLIFGHSAQLVCNFMGFVYPAYMSIKAIESSN 84
Query: 327 KDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYR 506
K+DDT+WLTYWV++A S+VE+FS IV FP+YWL K IF+++ YLP+ + G+ +Y+R
Sbjct: 85 KEDDTQWLTYWVIFAILSVVEFFSVQIVAVFPVYWLFKSIFLLYLYLPS-FLGAAKLYHR 143
Query: 507 IIRPYYQKHHGRID 548
++P +H G ID
Sbjct: 144 FVKPVAARHSGSID 157
>Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical
protein T03F6.6 protein.
Length = 295
Score = 128 bits (308), Expect = 5e-30
Identities = 52/118 (44%), Positives = 80/118 (67%)
Frame = +3
Query: 168 EQKVGVNRVYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKW 347
E G+ R + GL+ +Y++ G GAE +CN IG YPAY+S+KA+ + DDDT W
Sbjct: 49 EDATGLKREMLAYGLIGLNCVYMIIGSGAEFVCNLIGVAYPAYVSVKAIRTEGTDDDTMW 108
Query: 348 LTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPY 521
L YW V+ FSI+++F+ I+ +FP+YW+ K F+++ YLP E +GS VIY+++I P+
Sbjct: 109 LIYWTVFGAFSIIDFFAASIMSYFPIYWVAKAAFLLYLYLP-ETHGSHVIYHQLIDPF 165
>AF045646-11|AAK29829.1| 205|Caenorhabditis elegans Hypothetical
protein F56B3.6 protein.
Length = 205
Score = 114 bits (275), Expect = 5e-26
Identities = 51/108 (47%), Positives = 71/108 (65%)
Frame = +3
Query: 195 YIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYAC 374
Y GL+AF +LVFG A L+CN IGF YP Y S+KA+ SP DDDT WL YW +A
Sbjct: 84 YAAFGLIAF---FLVFGSVARLLCNLIGFGYPTYASVKAIRSPGGDDDTVWLIYWTCFAV 140
Query: 375 FSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRP 518
+V++FS+ I+ WFP Y++ K F+++ YLP + GS++ Y I+ P
Sbjct: 141 LYLVDFFSEAILSWFPFYYIAKACFLVYLYLP-QTQGSVMFYETIVDP 187
>U28412-5|AAC46595.1| 229|Caenorhabditis elegans Hypothetical
protein T19C3.4 protein.
Length = 229
Score = 79.4 bits (187), Expect = 2e-15
Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Frame = +3
Query: 252 AELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVG-WFPLY 428
+ L+ + G +YPAY S KA+ + + KW+ YW+V+A +S +E D ++ WFP Y
Sbjct: 6 SRLLIITAGTLYPAYRSYKAVRTKDTREYVKWMMYWIVFAIYSFLENLLDLVLAFWFPFY 65
Query: 429 WLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID---DMANTDPMNDIIKDLNE 599
+ LK +F+ W P G+ ++Y + + P +H ID + A ++ N +++ ++
Sbjct: 66 FQLKIVFIFWLLSPWT-KGASILYRKWVHPTLNRHEKDIDALLESAKSESYNQLMRIGSK 124
Query: 600 SI 605
S+
Sbjct: 125 SL 126
>AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical
protein Y110A2AR.1 protein.
Length = 251
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +3
Query: 246 FGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYF-SDFIVGWF- 419
F A + N IG V P S K L+ P K + + YW +Y F IV++F S F V F
Sbjct: 3 FLARGLSNLIGIVAPVIGSFKVLKKPTKPRLIECMHYWTIYGSFLIVDWFLSTFYVSCFI 62
Query: 420 PLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMA 557
P Y F + +P + V+Y + + P+ +K+ RID+++
Sbjct: 63 PFYDFFILTFTVLMAIP-HIGFASVLYTKFLAPFLRKYERRIDNIS 107
>AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical
protein Y48B6A.5 protein.
Length = 424
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 198 IFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQ--KDDDTKWLTYWVVYA 371
IF+ + LYL+ G A+++C ++ V PA S K L +P+ K+ L YW +Y
Sbjct: 74 IFVMTMISVALYLIEGEHAQVVCTALTSVPPAIFSYKVLMNPKSSKEGYHSILFYWTLYG 133
Query: 372 CFSIVEYF 395
++++ F
Sbjct: 134 ILAVIDQF 141
>AF077541-5|AAC64629.1| 380|Caenorhabditis elegans Hypothetical
protein Y23H5A.4 protein.
Length = 380
Score = 36.3 bits (80), Expect = 0.021
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +3
Query: 168 EQKVGVNRVYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDD--T 341
E VG + I L LYL+ G A+ IC ++ V PA S + L + D
Sbjct: 52 EGLVGTKELVILSALTMC--LYLINGEYAQTICTALTSVPPALFSYRVLTNQMTDKQGYH 109
Query: 342 KWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKC 443
L YW +Y ++++ F+ G Y L KC
Sbjct: 110 SILFYWTLYGLTALIDQFAGTAQG----YNLCKC 139
>L16559-7|AAA27930.1| 161|Caenorhabditis elegans Hypothetical
protein C06E1.1 protein.
Length = 161
Score = 34.3 bits (75), Expect = 0.084
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = +3
Query: 156 FELAEQKVGVNRVYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDD 335
F AE+ G+ R I +Y++ G L + I +P S L QK+
Sbjct: 29 FTQAEKFSGIPRERIVSMAFLMLSIYVLLGNFLPLFSHIICIFWPVKESFMILRQ-QKNP 87
Query: 336 DTKWLTYWVVYACFSIVEY 392
L YW++YA S+ +Y
Sbjct: 88 SDNILLYWILYAMVSLFDY 106
>AF016678-11|AAB66147.1| 343|Caenorhabditis elegans Serpentine
receptor, class i protein46 protein.
Length = 343
Score = 31.5 bits (68), Expect = 0.59
Identities = 22/114 (19%), Positives = 51/114 (44%)
Frame = +3
Query: 204 LGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSI 383
+G++ FTG+++VF A +++ + A ++ A ++ K L + +C +
Sbjct: 209 VGVMGFTGIFVVFQAIAMTTMDTMKMLKGARKTISAQSYDRQRSAMKSLIAQFLASCLLV 268
Query: 384 VEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRI 545
+ S +++ +P+ + + + + T + + VI PY GRI
Sbjct: 269 LPAASFYVISVYPINYGQEIVNISMAIFATRSSVNAVILVATTPPYRAFLFGRI 322
>Z83128-7|CAB05634.2| 243|Caenorhabditis elegans Hypothetical
protein W01D2.3 protein.
Length = 243
Score = 31.1 bits (67), Expect = 0.78
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 8/110 (7%)
Frame = +3
Query: 156 FELAEQKVGVNRVYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDD 335
F E+ G R + F G + ++ I + + P +M++ A+ S +
Sbjct: 88 FREIERVFGRRREHCFYGALGVLLTLVLLNDAVGAITAFMTLIIPTFMTVTAISSTSSYE 147
Query: 336 DTKWLT--------YWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWC 461
+ +L YW VYA F E F ++ W L + IF+ C
Sbjct: 148 NPSFLKNHQDFFVRYWTVYAVFVTGESFLSSLIHWD--LRLFRLIFMSMC 195
>AF016678-7|AAB66154.3| 340|Caenorhabditis elegans Serpentine
receptor, class i protein45 protein.
Length = 340
Score = 30.3 bits (65), Expect = 1.4
Identities = 28/138 (20%), Positives = 60/138 (43%), Gaps = 1/138 (0%)
Frame = +3
Query: 192 VYIFL-GLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVY 368
+Y+FL G+ F G++ VF A +++ + A ++ A ++ + LT +
Sbjct: 204 IYMFLVGVCGFLGIFGVFQVIAMTTVDTMKMLKGARRTISAQSYNRQKSALRSLTAQFLA 263
Query: 369 ACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 548
+ ++ S F++ +P+ + I V T + + VI PY GR+
Sbjct: 264 STLMVLPASSFFVIMTYPIKYGQDIINVSMAIFATRSSVNAVILVVTTPPYRAFLFGRV- 322
Query: 549 DMANTDPMNDIIKDLNES 602
M+N + ++ +N +
Sbjct: 323 -MSNRQKPSTVVVSINHT 339
>Z48583-1|CAA88470.1| 389|Caenorhabditis elegans Hypothetical
protein F54B3.2 protein.
Length = 389
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +2
Query: 386 GVLFRFHRRLVSIVLAVKVHLRDLVLPAD*IQRVPGDLLPYHSS--LLPEAPWSYR*YGQ 559
GV F FHRR S+V ++ + + +L + L+PY + LP A W YR G+
Sbjct: 182 GVQFEFHRR--SVVSKIQKTI-EFMLKLNNQTSTYSQLIPYWNPTIFLPPASWQYRKLGE 238
Query: 560 HR 565
+
Sbjct: 239 EK 240
>U97403-3|AAB52473.1| 142|Caenorhabditis elegans Hypothetical
protein T10E9.6 protein.
Length = 142
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 354 YWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLP 470
YW ++ F Y D I+ + PLY+++K I +LP
Sbjct: 91 YWTIFGFF----YLFDRILEYIPLYYIIKLAVFIGLFLP 125
>AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm
receptor protein 28 protein.
Length = 338
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 357 WVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV--IWCY 464
++ AC +S GW +YWLL C+ + +W Y
Sbjct: 110 FIYRACVLARPIWSKIFDGWKLIYWLLYCLIIGGLWSY 147
>AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical
protein Y67H2A.1 protein.
Length = 707
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 319 DSRAFIDMYAGYTKPIELHINSAPKPNTKYKPVNATKPK 203
DS DMYA LH + P P+ KY P N++ P+
Sbjct: 581 DSNPVYDMYADSVVAAILHAQANPVPD-KYLPSNSSFPQ 618
>AL110500-22|CAB60434.1| 1628|Caenorhabditis elegans Hypothetical
protein Y6B3A.1a protein.
Length = 1628
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 411 GWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHG 539
GWFP+++ L CI + C L SL + + I+ KHHG
Sbjct: 1221 GWFPIFFELSCI-INRCKLDVR-TRSLTVMFEIM-----KHHG 1256
>AL032650-3|CAA21704.2| 1628|Caenorhabditis elegans Hypothetical
protein Y6B3A.1a protein.
Length = 1628
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 411 GWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHG 539
GWFP+++ L CI + C L SL + + I+ KHHG
Sbjct: 1221 GWFPIFFELSCI-INRCKLDVR-TRSLTVMFEIM-----KHHG 1256
>Z81137-10|CAB03470.2| 232|Caenorhabditis elegans Hypothetical
protein W02D9.2 protein.
Length = 232
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 246 FGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEY 392
F L+ SIGFV+ Y SM L Q D + L + V+ + +V +
Sbjct: 179 FPLRLLITSIGFVWSTYASMGFLAGCQ-PDKKRLLVIYPVFLFYFVVSW 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,119,613
Number of Sequences: 27780
Number of extensions: 325514
Number of successful extensions: 1060
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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