Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_F08
(694 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g36720.1 68417.m05210 abscisic acid-responsive HVA22 family p... 99 3e-21
At4g24960.1 68417.m03576 ABA-responsive protein (HVA22d) identic... 85 3e-17
At5g50720.1 68418.m06285 ABA-responsive protein (HVA22e) identic... 81 7e-16
At1g69700.1 68414.m08021 ABA-responsive protein (HVA22c) identic... 79 4e-15
At2g42820.1 68415.m05301 abscisic acid-responsive HVA22 family p... 76 2e-14
At1g74520.1 68414.m08633 ABA-responsive protein (HVA22a) identic... 73 1e-13
At5g42560.1 68418.m05180 abscisic acid-responsive HVA22 family p... 69 3e-12
At1g75700.1 68414.m08794 abscisic acid-responsive HVA22 family p... 69 3e-12
At2g36020.1 68415.m04423 abscisic acid-responsive HVA22 family p... 69 4e-12
At5g62490.1 68418.m07843 ABA-responsive protein (HVA22b) identic... 68 5e-12
At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family p... 67 9e-12
At5g38150.1 68418.m04598 expressed protein 31 0.96
At2g18950.1 68415.m02212 homogentisate phytylprenyltransferase f... 30 1.3
At3g30390.1 68416.m03836 amino acid transporter family protein l... 30 1.7
At2g28800.2 68415.m03502 chloroplast membrane protein (ALBINO3) ... 29 2.2
At2g28800.1 68415.m03501 chloroplast membrane protein (ALBINO3) ... 29 2.9
At5g38820.1 68418.m04695 amino acid transporter family protein l... 28 6.8
At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing ... 28 6.8
At2g31940.1 68415.m03901 expressed protein 28 6.8
At5g06260.1 68418.m00700 nucleolar protein-related contains weak... 27 8.9
>At4g36720.1 68417.m05210 abscisic acid-responsive HVA22 family
protein low similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 227
Score = 98.7 bits (235), Expect = 3e-21
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Frame = +3
Query: 207 GLVAFTGLYLVFG-FGAELI----CNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYA 371
GL GL ++F + ++ C SIG P Y + KA+ES +++ K L YW Y
Sbjct: 17 GLTGEVGLRVLFSPLSSNIVLRTACCSIGIGLPVYSTFKAIESGDENEQQKMLIYWAAYG 76
Query: 372 CFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDD 551
FS+VE F+D I+ WFPLY+ +K F++W LPT GS IY IRP+ +H R+D
Sbjct: 77 SFSLVEVFTDKIISWFPLYYHVKFAFLVWLQLPT-VEGSKQIYNNQIRPFLLRHQARVDQ 135
Query: 552 MAN 560
+ +
Sbjct: 136 LVD 138
>At4g24960.1 68417.m03576 ABA-responsive protein (HVA22d) identical
to AtHVA22d [Arabidopsis thaliana] GI:4884938
Length = 135
Score = 85.4 bits (202), Expect = 3e-17
Identities = 32/84 (38%), Positives = 54/84 (64%)
Frame = +3
Query: 282 VYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWC 461
+YP Y S+ A+ES K DD +WL YW++Y+ S+ E ++ W P+++ +K +FV W
Sbjct: 22 LYPLYASVIAMESTTKVDDEQWLAYWIIYSFLSLTELILQSLIEWIPIWYTVKLVFVAWL 81
Query: 462 YLPTEYNGSLVIYYRIIRPYYQKH 533
LP ++ G+ IY R++R ++KH
Sbjct: 82 VLP-QFQGAAFIYNRVVREQFKKH 104
>At5g50720.1 68418.m06285 ABA-responsive protein (HVA22e) identical
to AtHVA22e [Arabidopsis thaliana] GI:11225589
Length = 116
Score = 81.0 bits (191), Expect = 7e-16
Identities = 30/84 (35%), Positives = 54/84 (64%)
Frame = +3
Query: 282 VYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWC 461
+YP Y S+ A+ESP K DD +WL YW++Y+ ++ E ++ W P+++ K +FV W
Sbjct: 22 LYPLYASVIAIESPSKVDDEQWLAYWILYSFLTLSELILQSLLEWIPIWYTAKLVFVAWL 81
Query: 462 YLPTEYNGSLVIYYRIIRPYYQKH 533
LP ++ G+ IY +++R ++K+
Sbjct: 82 VLP-QFRGAAFIYNKVVREQFKKY 104
>At1g69700.1 68414.m08021 ABA-responsive protein (HVA22c) identical
to AtHVA22c [Arabidopsis thaliana] GI:4884936
Length = 184
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/85 (40%), Positives = 52/85 (61%)
Frame = +3
Query: 273 IGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV 452
+ VYP Y S+KA+E+ +D +WLTYWV+YA S+ E + WFP++ +K +
Sbjct: 26 VTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISLFELTFSKPLEWFPIWPYMKLFGI 85
Query: 453 IWCYLPTEYNGSLVIYYRIIRPYYQ 527
W LP ++NG+ IY IRP+Y+
Sbjct: 86 CWLVLP-QFNGAEHIYKHFIRPFYR 109
>At2g42820.1 68415.m05301 abscisic acid-responsive HVA22 family
protein contains Pfam profile PF03134: TB2/DP1, HVA22
family
Length = 158
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/88 (36%), Positives = 51/88 (57%)
Frame = +3
Query: 258 LICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLL 437
L+ + +YP Y S +A+ESP DD +WLTYW++Y+ +I E ++ W P + L
Sbjct: 14 LVGPGVMLLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSVWRVLAWLPFWPYL 73
Query: 438 KCIFVIWCYLPTEYNGSLVIYYRIIRPY 521
K +F +W LP ++G+ IY +R Y
Sbjct: 74 KLLFCMWLVLPM-FSGAAYIYSNFVRQY 100
>At1g74520.1 68414.m08633 ABA-responsive protein (HVA22a) identical
to AtHVA22a [Arabidopsis thaliana] GI:4884932
Length = 177
Score = 73.3 bits (172), Expect = 1e-13
Identities = 27/84 (32%), Positives = 50/84 (59%)
Frame = +3
Query: 273 IGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV 452
+ VYP Y S++A+E+ DD +WLTYWV+Y+ +++E ++ W P++ +K I
Sbjct: 24 VSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIELTFAKLIEWLPIWSYMKLILT 83
Query: 453 IWCYLPTEYNGSLVIYYRIIRPYY 524
W +P ++G+ +Y +RP +
Sbjct: 84 CWLVIP-YFSGAAYVYEHFVRPVF 106
>At5g42560.1 68418.m05180 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 296
Score = 68.9 bits (161), Expect = 3e-12
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +3
Query: 273 IGFVYPAYMSMKALES--PQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCI 446
+G+ YPAY K +E P+ + W YW++ AC ++ E D V W P+Y K
Sbjct: 14 LGYAYPAYECYKTVEKNRPEIEQLRFWCQYWILVACLTVFERVGDAFVSWVPMYSEAKLA 73
Query: 447 FVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 548
F I+ + P + G+ +Y RPY +H ID
Sbjct: 74 FFIYLWYP-KTRGTTYVYESFFRPYLSQHENDID 106
>At1g75700.1 68414.m08794 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 166
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +3
Query: 276 GFVYPAYMSMKALE--SPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIF 449
G+ YPAY K +E P+ W YW++ A +I E D +V W P+Y K F
Sbjct: 4 GYAYPAYECFKTVELNKPEIQQLQFWCQYWIIVAALTIFERIGDALVSWLPMYSEAKLAF 63
Query: 450 VIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 548
I+ + P + G+ +Y RPY KH ID
Sbjct: 64 FIYLWFP-KTKGTTYVYDSFFRPYIAKHENEID 95
>At2g36020.1 68415.m04423 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 258
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = +3
Query: 246 FGAELICNSIGFVYPAYMSMKALESPQKDDDTK--WLTYWVVYACFSIVEYFSDFIVGWF 419
F L+ +G+ YPA+ K +E + D + W YW++ A S E DF + W
Sbjct: 5 FIIRLLVLILGYTYPAFECFKTVEKNKVDIEELRFWCQYWILLALISSFERVGDFFISWL 64
Query: 420 PLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 548
PLY +K +F ++ + P + G+ +Y +++PY +H ID
Sbjct: 65 PLYGEMKVVFFVYLWYP-KTKGTRHVYETLLKPYMAQHETEID 106
>At5g62490.1 68418.m07843 ABA-responsive protein (HVA22b) identical
to AtHVA22b [Arabidopsis thaliana] GI:4884934
Length = 167
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/88 (35%), Positives = 44/88 (50%)
Frame = +3
Query: 273 IGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV 452
I VYP Y S++A+ES DD +WLTYW +Y+ + E ++ W PLY K
Sbjct: 24 ISLVYPLYASVRAIESRSHGDDKQWLTYWALYSLIKLFELTFFRLLEWIPLYPYAKLALT 83
Query: 453 IWCYLPTEYNGSLVIYYRIIRPYYQKHH 536
W LP NG+ +Y +R + H
Sbjct: 84 SWLVLP-GMNGAAYLYEHYVRSFLLSPH 110
>At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 315
Score = 67.3 bits (157), Expect = 9e-12
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +3
Query: 276 GFVYPAYMSMKALES--PQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIF 449
G+ YPAY KA+E P+ W YW++ A +I E D + W PLY K F
Sbjct: 15 GYAYPAYECYKAVEKNKPEMQQLRFWCQYWILVAALTIFERVGDALASWVPLYCEAKLAF 74
Query: 450 VIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 548
I+ + P + G+ +Y +PY KH ID
Sbjct: 75 FIYLWFP-KTRGTTYVYDSFFQPYVAKHENEID 106
>At5g38150.1 68418.m04598 expressed protein
Length = 574
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 253 APKPNTKYKPVNATKPKKMYTLFTPTFCSASSKYXV 146
+PKP K+ PV KP++ ++ TPTF K V
Sbjct: 528 SPKPVGKFTPVQRGKPRRYSSVGTPTFFVIKKKKKV 563
>At2g18950.1 68415.m02212 homogentisate phytylprenyltransferase
family protein (HPT1) / tocopherol phytyltransferase
family protein (TPT1) identical to gi:17104828; contains
Pfam profile PF01040: UbiA prenyltransferase family;
identical to cDNA tocopherol polyprenyltransferase
(TPT1) GI:17104827
Length = 393
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 363 VYACFSIVEYFSDFIVGWFPLYWLLKCIFVI 455
+ A FSI+ ++ +IVG +PL+W L F++
Sbjct: 186 IVASFSIMSFWLGWIVGSWPLFWALFVSFML 216
>At3g30390.1 68416.m03836 amino acid transporter family protein low
similarity to neuronal glutamine transporter [Rattus
norvegicus] GI:6978016; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 460
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 198 IFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACF 377
IFLG ++ F F +GF++PA + +K + DT + +V A
Sbjct: 380 IFLGANFIPSIWDAFQFTGATAAVCLGFIFPASIILKDRHDKATNRDTTLAIFMIVLAVL 439
Query: 378 S-IVEYFSD 401
S + +SD
Sbjct: 440 SNAIAIYSD 448
>At2g28800.2 68415.m03502 chloroplast membrane protein (ALBINO3)
Oxa1p homolog {PMID:11148275}; identical to chloroplast
membrane protein ALBINO3 [Arabidopsis thaliana]
GI:2209332
Length = 348
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 294 YMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLL 437
Y+SM+ ++ PQ DD + T V ++ YF+ + +YWL+
Sbjct: 293 YVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWLV 340
>At2g28800.1 68415.m03501 chloroplast membrane protein (ALBINO3)
Oxa1p homolog {PMID:11148275}; identical to chloroplast
membrane protein ALBINO3 [Arabidopsis thaliana]
GI:2209332
Length = 462
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 294 YMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWL 434
Y+SM+ ++ PQ DD + T V ++ YF+ + +YWL
Sbjct: 293 YVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFALSVPSGLSIYWL 339
>At5g38820.1 68418.m04695 amino acid transporter family protein low
similarity to N system amino acids transporter NAT-1
[Mus musculus] GI:7406950; contains Pfam profile
PF01490: Transmembrane amino acid transporter protein
Length = 456
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +3
Query: 198 IFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACF 377
IFLG ++ F F IGF++PA + +K + D +V A F
Sbjct: 374 IFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAVILKDRHNQATKRDKTIAICMIVLAVF 433
Query: 378 S-IVEYFSD 401
S + +SD
Sbjct: 434 SNAIAIYSD 442
>At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing
protein
Length = 527
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 267 NSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACF 377
NS GFVY + S++A + Q+ +W ++ A F
Sbjct: 479 NSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATF 515
>At2g31940.1 68415.m03901 expressed protein
Length = 120
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 273 IGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPL 425
+G + + + + ES + T W +++ F +V Y S F WFPL
Sbjct: 69 VGGMMTSLIHLNERESLYRAGGTPWGVAFMLVFLFFMVSYQSQFQERWFPL 119
>At5g06260.1 68418.m00700 nucleolar protein-related contains weak
similarity to nucleolar protein C7C (GI:13540302)
[Rattus norvegicus]
Length = 424
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +3
Query: 447 FVIWC-YLPT--EYNGSLVIYYRIIRPYYQKHHGRIDDMANTD 566
F WC ++PT ++ GSL++ +RP YQ H +D ++D
Sbjct: 172 FRSWCSFVPTIRKFLGSLLMPPSTVRPGYQVPHLLYEDSVSSD 214
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,183,297
Number of Sequences: 28952
Number of extensions: 298749
Number of successful extensions: 764
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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