Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_F07
(736 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 212 4e-56
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 180 1e-46
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 166 2e-42
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 149 4e-37
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 128 8e-31
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 112 6e-26
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 98 1e-21
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 77 3e-15
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 2.8
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.7
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 27 3.7
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 4.8
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 6.4
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 26 6.4
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 6.4
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 26 6.4
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 6.4
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 212 bits (518), Expect = 4e-56
Identities = 96/130 (73%), Positives = 105/130 (80%)
Frame = +1
Query: 157 NFRALCTGXXGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 336
NFRALCTG G+GY GS FHRVIP FMLQGGDFT NGTGGKSIYG KF DENF LKH
Sbjct: 33 NFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNK 92
Query: 337 PGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 516
PG+LSMANAG +TNGSQFFITTV T WLDG+HVVFG V EGM+VVK++E+ GS SG T
Sbjct: 93 PGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRA 152
Query: 517 RIVIKDCGQI 546
RIVI CG +
Sbjct: 153 RIVIDKCGTV 162
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 180 bits (439), Expect = 1e-46
Identities = 80/108 (74%), Positives = 91/108 (84%)
Frame = +1
Query: 157 NFRALCTGXXGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 336
NFRAL TG GFGY+GSIFHRVIPNFM+QGGD T +GTGGKSIYG++F DENF L H
Sbjct: 58 NFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQR 117
Query: 337 PGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 480
PG+LSMANAG D+NGSQFFITTVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 118 PGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 166 bits (404), Expect = 2e-42
Identities = 81/132 (61%), Positives = 95/132 (71%), Gaps = 4/132 (3%)
Frame = +1
Query: 157 NFRALCTGXXGFG----YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTL 324
NF +LC G G YKGS FHRVI NFMLQGGDFT NGTGG+SIYG KFEDENF L
Sbjct: 34 NFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFEL 93
Query: 325 KHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 504
KH P +LSMANAG +TNGSQFFITTV T LDG+HVVFG V++G V+ IE +++
Sbjct: 94 KHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKND 153
Query: 505 KTSKRIVIKDCG 540
+VI++CG
Sbjct: 154 DPVVPVVIEECG 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 149 bits (361), Expect = 4e-37
Identities = 72/138 (52%), Positives = 94/138 (68%), Gaps = 8/138 (5%)
Frame = +1
Query: 157 NFRALCTGXX------GFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNK-FEDEN 315
NFR CTG GYK S FHR+I FM+QGGDF + +GTG +I+ ++ F DEN
Sbjct: 36 NFRQFCTGETLGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDEN 95
Query: 316 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFG 492
FTLKH PG+LSMANAG D+NG QFFITTV +LDG+HVVFG V+EG ++VK+IE T
Sbjct: 96 FTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPV 155
Query: 493 SQSGKTSKRIVIKDCGQI 546
+ + + I +CG++
Sbjct: 156 GANSRPKSNVAIVECGEM 173
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 128 bits (309), Expect = 8e-31
Identities = 64/111 (57%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
Frame = +1
Query: 151 CXNFRALCTGXXGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLK 327
C NF L G+ Y G IFHRVIP+F++QGGD T G GG SIYG+KF+DE + L
Sbjct: 26 CQNFYTLAK--EGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSDLH 81
Query: 328 HTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 480
HTG G+LSMANAG +TN SQFFIT T WLDG+H +FG VV G+ V K++
Sbjct: 82 HTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRM 132
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 112 bits (269), Expect = 6e-26
Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Frame = +1
Query: 196 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 372
Y +IFHR+I NFM+QGGD +GTGG+SI+ FEDE + LKH P +SMAN+G +
Sbjct: 491 YDNTIFHRIIKNFMIQGGDPLG-DGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPN 549
Query: 373 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 483
TNGSQFFITT T WLDG+H +F G++VV +IE
Sbjct: 550 TNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIE 586
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 97.9 bits (233), Expect = 1e-21
Identities = 50/108 (46%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Frame = +1
Query: 196 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGAD 372
Y+ +IFHR I FM+QGGD + G GG+SI+G F+DE LKH G++SMAN G +
Sbjct: 312 YRNTIFHRNIARFMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKN 370
Query: 373 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 516
TNGSQFFI LD +H +FG VV G+ V+ +E + S K
Sbjct: 371 TNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPK 418
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 76.6 bits (180), Expect = 3e-15
Identities = 45/102 (44%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Frame = +1
Query: 151 CXNFRALCTGXXGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENF-TLK 327
C NF LC G+ Y G+I HRV+P F++QGGD T G GG+SIYG F E L+
Sbjct: 37 CRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGESIYGEPFAVETHPRLR 92
Query: 328 HTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 453
G++ MA + N SQFFIT T +G+ +FG VV
Sbjct: 93 FIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 506 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 420
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.7
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 378 WFPVLHHHC 404
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = -2
Query: 540 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEELG 382
T VFD + +L+ ++++DN +IPK+ A S + +G
Sbjct: 525 TVVFDKTGTLTVGKLSVTDISIVDNLEELLDIPKNIFWAFVKASESSSEHPIG 577
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -3
Query: 473 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 324
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 6.4
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 250 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 396
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 25.8 bits (54), Expect = 6.4
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 197 TRAPFSIVSSPISCCKEGTSPTITALGENPSTAISLRTRISP 322
+RA S++S I KE +P+ITA +P +A S + ISP
Sbjct: 321 SRAAASLLS--ILDSKEKNTPSITAKAGSPQSAPSKASYISP 360
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 6.4
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 158 TSVPCALAXKASVTRAPFSIVSSPISCCKEGTSPTITALGENPSTAISLRTRISPLST 331
TS C + S+ S +S+PI+ TS + T++ P++ S T SPL T
Sbjct: 225 TSTSCTTS--TSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 25.4 bits (53), Expect = 8.5
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 158 TSVPCALAXKASVTRAPFSIVSSPISCCKEGTSPTITALGENPSTAISLRTRISPLST 331
TS C + T S+ S+PI+ TS + T++ P++ S T SPL T
Sbjct: 168 TSTSCTTSTSIPPTGGSSSL-STPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 25.8 bits (54), Expect = 6.4
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = -1
Query: 214 GKWSPCNRSLXRQCTGHGSXHMDLGVTALISXITILTQWGXGNSDXEEDDVGETFCRDEX 35
GK ++ R T +G+ + + + + + T T+ NS EDDVG+ D+
Sbjct: 764 GKTFRGHKPASRPSTANGTSNQNT-TSEITTSETTATEKTPSNSSDTEDDVGDVVENDKD 822
Query: 34 WKQID 20
Q D
Sbjct: 823 LLQFD 827
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 6.4
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -3
Query: 491 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 312
P S + +S +++ T+ P+S EV T P+ S+ A + E + G V
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPT 221
Query: 311 SSSNL 297
SSS++
Sbjct: 222 SSSSI 226
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,967,159
Number of Sequences: 5004
Number of extensions: 60259
Number of successful extensions: 158
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 347244562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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