Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_F07
(736 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 224 7e-59
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 215 2e-56
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 172 3e-43
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 4e-41
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 98 7e-21
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 91 6e-19
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 89 5e-18
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 86 2e-17
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 77 1e-14
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2) 37 0.015
SB_24760| Best HMM Match : PT (HMM E-Value=0.17) 31 0.73
SB_6387| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.73
SB_3760| Best HMM Match : SVA (HMM E-Value=0.19) 30 1.7
SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085) 29 3.0
SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11) 29 3.0
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_24028| Best HMM Match : DNA_photolyase (HMM E-Value=1.3e-39) 29 5.2
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 28 9.0
SB_15696| Best HMM Match : DUF282 (HMM E-Value=2.5) 28 9.0
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 224 bits (547), Expect = 7e-59
Identities = 97/131 (74%), Positives = 112/131 (85%)
Frame = +1
Query: 157 NFRALCTGXXGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 336
NFR LCT GFGYKGS FHR+IP FM QGGDFT HNGTGGKSIYG KFEDENF LKHTG
Sbjct: 168 NFRCLCTHEKGFGYKGSSFHRIIPQFMCQGGDFTKHNGTGGKSIYGAKFEDENFVLKHTG 227
Query: 337 PGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 516
GVLSMAN+G +TNGSQFF+TT KT WLDG+HVVFGNV+EG +VV+++E GSQSGK SK
Sbjct: 228 AGVLSMANSGPNTNGSQFFLTTEKTDWLDGKHVVFGNVIEGFDVVRKMEAVGSQSGKASK 287
Query: 517 RIVIKDCGQIA 549
++VI DCG+++
Sbjct: 288 KVVIDDCGELS 298
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 215 bits (526), Expect = 2e-56
Identities = 97/130 (74%), Positives = 108/130 (83%)
Frame = +1
Query: 157 NFRALCTGXXGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 336
NFRALCTG GFGYKGS FHRVIP FM QGGDFT +GTGGKSIYG KF DENF LKHTG
Sbjct: 34 NFRALCTGEKGFGYKGSSFHRVIPGFMCQGGDFTRGDGTGGKSIYGAKFADENFNLKHTG 93
Query: 337 PGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 516
PG+LSMANAG TNGSQFF+ T KTSWLDG+HVVFG+V +GM+VVK+IE GS SGKTSK
Sbjct: 94 PGILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKIEKVGSDSGKTSK 153
Query: 517 RIVIKDCGQI 546
++VI D +
Sbjct: 154 KVVIADSASV 163
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 172 bits (418), Expect = 3e-43
Identities = 78/109 (71%), Positives = 88/109 (80%)
Frame = +1
Query: 157 NFRALCTGXXGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 336
NF AL GFGYK SIFHRVI NFM+QGGDFTN +GTGG SIYG F+DENF LKH G
Sbjct: 57 NFVALADKEQGFGYKDSIFHRVIKNFMIQGGDFTNKDGTGGYSIYGKYFDDENFNLKHYG 116
Query: 337 PGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 483
PG L MANAG +TNGSQF+ITT+KTSWLDG H FG V+EGM+VV++IE
Sbjct: 117 PGWLCMANAGKNTNGSQFYITTIKTSWLDGSHTCFGKVLEGMDVVRRIE 165
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 165 bits (400), Expect = 4e-41
Identities = 75/94 (79%), Positives = 81/94 (86%)
Frame = +1
Query: 187 GFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAG 366
GFGYK SIFHRVI +FM+QGGDFT +GTGGKSIYG KF DENF L+H G G LSMANAG
Sbjct: 86 GFGYKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQKFADENFKLQHYGAGWLSMANAG 145
Query: 367 ADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEV 468
DTNGSQFFITTVKT WLDGRHVVFG V++GMEV
Sbjct: 146 KDTNGSQFFITTVKTPWLDGRHVVFGKVLKGMEV 179
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 97.9 bits (233), Expect = 7e-21
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Frame = +1
Query: 265 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 441
+GTGG+SI+G +FEDE + L+H P +SMANAG +TNGSQFFIT V T WLD +H VF
Sbjct: 2 DGTGGESIWGGEFEDEFHRNLRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVF 61
Query: 442 GNVVEGMEVVKQI 480
G VV+GM+V +QI
Sbjct: 62 GRVVKGMDVAQQI 74
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +1
Query: 325 KHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 504
+H PG+LSMAN+G +TNGSQFFITTV T LDGRHVVFG V++GM+VV+++E
Sbjct: 188 EHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVVRELEATPVDDS 247
Query: 505 KTSKRIVIKDCGQIA 549
+I++CG++A
Sbjct: 248 SPKSPCIIEECGELA 262
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 89.0 bits (211), Expect = 3e-18
Identities = 40/65 (61%), Positives = 49/65 (75%)
Frame = +1
Query: 352 MANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIK 531
MANAG DTNGSQFFITTVKTSWLDG+HVVFG V+EGM+VV+++E + K +I
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKLENVNVKGSTPVKTCMID 60
Query: 532 DCGQI 546
D G +
Sbjct: 61 DSGTL 65
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 88.6 bits (210), Expect = 5e-18
Identities = 39/91 (42%), Positives = 57/91 (62%)
Frame = +1
Query: 268 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 447
G GG+S+YG FEDE+F++ H GV+ MAN G TNGSQF+IT W+D ++V FG
Sbjct: 46 GIGGESVYGPLFEDEDFSVAHNRRGVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQ 105
Query: 448 VVEGMEVVKQIETFGSQSGKTSKRIVIKDCG 540
V+EG+ V+ +E + + + + DCG
Sbjct: 106 VIEGLNVLDVLEGQETFNERPKVECRVADCG 136
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 86.2 bits (204), Expect = 2e-17
Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = +1
Query: 265 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 444
NGTGG+SIYG F DE F KH P +LSMAN G +TNGSQFFI HVVFG
Sbjct: 25 NGTGGESIYGGTFGDECFEFKHERPMLLSMANRGPNTNGSQFFII----------HVVFG 74
Query: 445 NVVEGMEVVKQIETF-GSQSGKTSKRIVIKDCGQI 546
+V++G E+V+QIE+ ++ + + + + +CG++
Sbjct: 75 HVIQGEELVRQIESLPTNEKNRPNADVKVSNCGEL 109
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = +1
Query: 343 VLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 480
+LSMANAG TNGSQFF+ T KTSWLDG+HVVFG+V +GM+VVK++
Sbjct: 2 ILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKM 47
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 52.0 bits (119), Expect = 5e-07
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Frame = +1
Query: 196 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA-D 372
Y G+ FHRVIP FM+QGG F + + ++E H G L+MA D
Sbjct: 60 YAGTQFHRVIPGFMVQGGGF---DADMQQKDTQAPIKNEADNGLHNVRGTLAMARTQVRD 116
Query: 373 TNGSQFFITTVKTSWLDG-----RHVVFGNVVEGMEVVKQI 480
+ SQFFI ++LD + VFG VV+GM+VV +I
Sbjct: 117 SATSQFFINHKDNAFLDHGSRDFGYAVFGKVVKGMDVVDKI 157
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 328 HTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 444
H G +SMAN G ++NGSQFFI K LD ++ +FG
Sbjct: 301 HNARGTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFG 339
>SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2)
Length = 175
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/40 (35%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +1
Query: 430 HVVFGNVVEGMEVVKQIETF-GSQSGKTSKRIVIKDCGQI 546
HVVFG+V++G E+V+QIE+ ++ + + + + +CG++
Sbjct: 3 HVVFGHVIQGEELVRQIESLPTNEKNRPNADVKVSNCGEL 42
>SB_24760| Best HMM Match : PT (HMM E-Value=0.17)
Length = 422
Score = 31.5 bits (68), Expect = 0.73
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = -3
Query: 470 TTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 333
TT PST P T PS+ E +T WEP P PGP
Sbjct: 34 TTGEPSTWEPMTGA-PSTWEPMTGAPSTWEPWTDGPGPYPTDGPGP 78
Score = 31.1 bits (67), Expect = 0.97
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 443 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 333
P TT PS+ E +T WEP+ AP+ T GP
Sbjct: 32 PFTTGEPSTWEPMTGAPSTWEPMTGAPSTWEPWTDGP 68
>SB_6387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -3
Query: 473 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 333
L+ + + FP TT P + + T + EPL+ P +R P P
Sbjct: 13 LSATQLTAAFPTTTTTPVTTQTTTTDVSRTEPLIELPTAQEKRKPCP 59
>SB_3760| Best HMM Match : SVA (HMM E-Value=0.19)
Length = 259
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Frame = -3
Query: 446 FPKTTCLPSSQE-----VLTVVMKNWEPLVSAPALAMERTPGP 333
FP+ + LP S E +LT++++N P ++APA + P P
Sbjct: 81 FPQPSLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1110
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = -3
Query: 446 FPKTTCLPSSQE-----VLTVVMKNWEPLVSAPALAMERTPGP 333
FP+ LP S E +LT++++N P ++APA + P P
Sbjct: 81 FPQPPLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085)
Length = 512
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -2
Query: 540 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEE 388
T V +N + PR A +GL D F+ K+ MS I+PGG D +EE
Sbjct: 431 TKVPENVQPKPKPRRAGEGLPHSDFKSGFSY--KEYMSGIRPGGPDMEEEE 479
>SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11)
Length = 48
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 8/29 (27%)
Frame = +1
Query: 157 NFRALCTGXXGFG--------YKGSIFHR 219
NFRALCTG G G YKG FHR
Sbjct: 19 NFRALCTGEKGIGPSTGKPLHYKGCPFHR 47
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -3
Query: 491 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 312
P+ TTS PST+ P+T ++ T N AP+ + RT + LR
Sbjct: 87 PRTGSTTTTSAPSTSTPRTGSTTTTSAPSTSTTSN--STTRAPSTSTPRTGSTITLRTST 144
Query: 311 SS 306
+S
Sbjct: 145 TS 146
>SB_24028| Best HMM Match : DNA_photolyase (HMM E-Value=1.3e-39)
Length = 432
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/54 (22%), Positives = 27/54 (50%)
Frame = +2
Query: 152 VXTSVPCALAXKASVTRAPFSIVSSPISCCKEGTSPTITALGENPSTAISLRTR 313
+ T+V C L ++ +S+ +SC + S T++ + ST +S +++
Sbjct: 371 LSTTVSCQLKALSTTVSCELKALSTTVSCQSKALSTTVSCQSKALSTTVSCQSK 424
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = -3
Query: 503 PDWLPKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 333
P P + TT+ P TT P+TT P + T + P + P +T P
Sbjct: 1767 PPHSPPTTTTTTTTTPETTAPRTT-TPETTTPETTTPRTTTPETTKPRTTTPKTTTP 1822
>SB_15696| Best HMM Match : DUF282 (HMM E-Value=2.5)
Length = 128
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 167 PCALAXKASVTRAPFSIVSSPISCCKE-GTSPTITA 271
PCALA SV+ P S VSS + G S TI+A
Sbjct: 48 PCALATAPSVSEVPASTVSSSSPLRRSPGPSGTISA 83
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,452,467
Number of Sequences: 59808
Number of extensions: 472327
Number of successful extensions: 1300
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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